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The map label for this gene is ydhP [H]

Identifier: 169628520

GI number: 169628520

Start: 1432919

End: 1434148

Strand: Direct

Name: ydhP [H]

Synonym: MAB_1429

Alternate gene names: 169628520

Gene position: 1432919-1434148 (Clockwise)

Preceding gene: 169628519

Following gene: 169628522

Centisome position: 28.28

GC content: 66.91

Gene sequence:

>1230_bases
ATGACTGCCGTTGTCGATTCACGCGTGCAGCCGGCGGCACCCGTGTCGCCGCGCGTGCGCCGCGGCGCAATCCTCGCACT
GGCCCTCGGTGGATTCGGGATCGGGACAACCGAATTCGTGGCAATGGGGCTGTTGCCCAATATCGCGCACGGCCTGCATG
TCACCGAGCCGCAGGCGGGGCATGTCATCAGCGCCTACGCGCTGGGTGTGGTGGTGGGGGCGCCGGTAATCGCGGCGCTC
ACTGCCCGTGCCTCGCGCCGGACATTGCTTGTCGCACTCATGGTCGCGTTCACGATCGGCAATGCCGCCACCGTTTTCGC
GCCGGGCTACGCGGCGCTTATCGCATCGAGATTCGTCGCCGGGCTGCCGCACGGCGCGTACTTCGGCGTGGCTGCCCTGG
TGGCCGCGCACCTGGCCGGTCCGGGCGAACGCGCCAAGGCCGTCGGACAAACCATGCTCGGCCTCTCGGTGGCCAATGTG
GTCGGTGTTCCCGTGGCCACCTGGCTGGGCAACACGGTGGGCTGGCGTTCGGCTTTTGCCGTTGTCGCCGTCATCGGTGC
GATCACGATCGCGGCACTGCTGCGGTACCTGCCCGGGCTGACGGATATGCGGATCACCAATCCGTTGACCGAGCTGGGTG
CCTTGCGTCGCGTGCAGGTGTGGTTCACCCTGCTCATCGGCATCGTGGGCTTCGGCGGCATGTTCGCCTTCTACACCTAC
ATCAGCACCACCCTCACCAGCGTTTCCGGACTGCCCAGGGCGCTTGTCCCACTTGCGTTGTCGCTCTACGGCATCGGCAT
GGTCACTGGAAATGTGCTGGGCGGTTGGATGGCCGACCGGAGCGTGGTTCGAGCCATTGCCGTCGGGCTGGTGCTGGTGG
CCGCGATGCTGCTCATCTTCGCGGCGGTGTCAAGAAACCCCTGGGCCGCATTGGCTTTGGTCTTCGCGGTCGGCGTCTCC
GGGACGTCTTTGGTGCCGGCGCTCCAGACCCGTCTCATGGATGTAGCCGACGACGCGCAAACATTGGCGGCCGCGCTGAA
CCACTCGGCTCTCAACATCGCCAATGCCGGTGGGGCATGGCTGGGTGGTTTGGTCATCACCGCCGGATACGGCTATCGGG
CGCCCTCCCTCGTCGGTGCCGCGCTGGCGATCGCGGGACTGGTCGTACTGGGCCTTTCGGTGCTGTATGCGCGGTCCAGG
GCCGTGGCGTTGCCTAGCCGGGCGGGCTAA

Upstream 100 bases:

>100_bases
CGGCAGAATTGGTGGTTGACCGACCAAGGCGCTCATTGGTGTGCGCCGCCGCGCGCGTTCAGCGCAACGCATCCACCGCA
TACCGCACAGGAGCCCATTC

Downstream 100 bases:

>100_bases
GTCGTTAACAATCGCTGTAGGCCGTAGTCGAATTGTTTGTCGCGGGCGGTATTTCGCAGGATTTCCAGTCCGGCCCGGAC
GAGCGGGAAACGTGACTCGT

Product: major facilitator superfamily permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 409; Mature: 408

Protein sequence:

>409_residues
MTAVVDSRVQPAAPVSPRVRRGAILALALGGFGIGTTEFVAMGLLPNIAHGLHVTEPQAGHVISAYALGVVVGAPVIAAL
TARASRRTLLVALMVAFTIGNAATVFAPGYAALIASRFVAGLPHGAYFGVAALVAAHLAGPGERAKAVGQTMLGLSVANV
VGVPVATWLGNTVGWRSAFAVVAVIGAITIAALLRYLPGLTDMRITNPLTELGALRRVQVWFTLLIGIVGFGGMFAFYTY
ISTTLTSVSGLPRALVPLALSLYGIGMVTGNVLGGWMADRSVVRAIAVGLVLVAAMLLIFAAVSRNPWAALALVFAVGVS
GTSLVPALQTRLMDVADDAQTLAAALNHSALNIANAGGAWLGGLVITAGYGYRAPSLVGAALAIAGLVVLGLSVLYARSR
AVALPSRAG

Sequences:

>Translated_409_residues
MTAVVDSRVQPAAPVSPRVRRGAILALALGGFGIGTTEFVAMGLLPNIAHGLHVTEPQAGHVISAYALGVVVGAPVIAAL
TARASRRTLLVALMVAFTIGNAATVFAPGYAALIASRFVAGLPHGAYFGVAALVAAHLAGPGERAKAVGQTMLGLSVANV
VGVPVATWLGNTVGWRSAFAVVAVIGAITIAALLRYLPGLTDMRITNPLTELGALRRVQVWFTLLIGIVGFGGMFAFYTY
ISTTLTSVSGLPRALVPLALSLYGIGMVTGNVLGGWMADRSVVRAIAVGLVLVAAMLLIFAAVSRNPWAALALVFAVGVS
GTSLVPALQTRLMDVADDAQTLAAALNHSALNIANAGGAWLGGLVITAGYGYRAPSLVGAALAIAGLVVLGLSVLYARSR
AVALPSRAG
>Mature_408_residues
TAVVDSRVQPAAPVSPRVRRGAILALALGGFGIGTTEFVAMGLLPNIAHGLHVTEPQAGHVISAYALGVVVGAPVIAALT
ARASRRTLLVALMVAFTIGNAATVFAPGYAALIASRFVAGLPHGAYFGVAALVAAHLAGPGERAKAVGQTMLGLSVANVV
GVPVATWLGNTVGWRSAFAVVAVIGAITIAALLRYLPGLTDMRITNPLTELGALRRVQVWFTLLIGIVGFGGMFAFYTYI
STTLTSVSGLPRALVPLALSLYGIGMVTGNVLGGWMADRSVVRAIAVGLVLVAAMLLIFAAVSRNPWAALALVFAVGVSG
TSLVPALQTRLMDVADDAQTLAAALNHSALNIANAGGAWLGGLVITAGYGYRAPSLVGAALAIAGLVVLGLSVLYARSRA
VALPSRAG

Specific function: Unknown

COG id: COG2814

COG function: function code G; Arabinose efflux permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787947, Length=377, Percent_Identity=42.9708222811671, Blast_Score=236, Evalue=1e-63,
Organism=Escherichia coli, GI1786595, Length=388, Percent_Identity=34.5360824742268, Blast_Score=203, Evalue=2e-53,
Organism=Escherichia coli, GI145693198, Length=335, Percent_Identity=26.865671641791, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1787808, Length=175, Percent_Identity=30.2857142857143, Blast_Score=87, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 41453; Mature: 41321

Theoretical pI: Translated: 11.58; Mature: 11.58

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAVVDSRVQPAAPVSPRVRRGAILALALGGFGIGTTEFVAMGLLPNIAHGLHVTEPQAG
CCCCCCCCCCCCCCCCCHHHHCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
HVISAYALGVVVGAPVIAALTARASRRTLLVALMVAFTIGNAATVFAPGYAALIASRFVA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHH
GLPHGAYFGVAALVAAHLAGPGERAKAVGQTMLGLSVANVVGVPVATWLGNTVGWRSAFA
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
VVAVIGAITIAALLRYLPGLTDMRITNPLTELGALRRVQVWFTLLIGIVGFGGMFAFYTY
HHHHHHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISTTLTSVSGLPRALVPLALSLYGIGMVTGNVLGGWMADRSVVRAIAVGLVLVAAMLLIF
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAVSRNPWAALALVFAVGVSGTSLVPALQTRLMDVADDAQTLAAALNHSALNIANAGGAW
HHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECCCCCHH
LGGLVITAGYGYRAPSLVGAALAIAGLVVLGLSVLYARSRAVALPSRAG
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TAVVDSRVQPAAPVSPRVRRGAILALALGGFGIGTTEFVAMGLLPNIAHGLHVTEPQAG
CCCCCCCCCCCCCCCCHHHHCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC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HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]