| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628504
Identifier: 169628504
GI number: 169628504
Start: 1415772
End: 1416290
Strand: Direct
Name: 169628504
Synonym: MAB_1413
Alternate gene names: NA
Gene position: 1415772-1416290 (Clockwise)
Preceding gene: 169628503
Following gene: 169628507
Centisome position: 27.94
GC content: 66.86
Gene sequence:
>519_bases ATGGCACGAGATCAACAGGCGGATGCTTCTGACGCGGCGGAATGGTTCGCCGGACGCTTGCCCGACGGATGGTTCAGCGG CGCTCCTGAAGTCATCGTCGACCGCGAAGAGATCACCGTCATCGGCCGGCTGACCGCCGCCGAGGGCGAGAAAGAGAGTG AGGCGCACGCGGCGGGCCGCGCCTCCCGCTTTCGGGAAGAGACCCGCGCGCACCGAATGCGCATCGCCGACGAGGCGCAG GCTCGCTACGGACGCAAGGTGTCCTGGGGTGTCGACGTCGGCGAAGATCCTGATCGAATCCTGTTCACACACATCGCCGT TCCGGTGATGACCCGGCTGCGCCAGCCTGAGCGTCAGGTGCTGGATACGTTGGTTGAGGCCGGAGTCGCGCGGTCCCGTT CCGATGCGTTGGCGTGGGCGGTTCGCCTGGTCGGTGAACATACCGAGGAGTGGCTGGACAAGCTGCGTGCCGCGATGACC GAGGTTCGGGACCTGCGAACGCAGGGGCCGCGGCTCTAG
Upstream 100 bases:
>100_bases GCGATCGTCATGCGCCGCAGCTGACGCGGTTCGCCGCCATTTCCCGGTTGTTCGCTGTAGGCGAACACCGCGCGGTGTGT AAGTATGTAATTTTGTAATC
Downstream 100 bases:
>100_bases GACTGCGTCATCGCGAAATAGGCGCCGTGGCGGGCCAGTAGTTCGGTGTGTGTGCCGCTCTCGGTGACGCGCCCGCCGTC CAGCACCACGATGCGGTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MARDQQADASDAAEWFAGRLPDGWFSGAPEVIVDREEITVIGRLTAAEGEKESEAHAAGRASRFREETRAHRMRIADEAQ ARYGRKVSWGVDVGEDPDRILFTHIAVPVMTRLRQPERQVLDTLVEAGVARSRSDALAWAVRLVGEHTEEWLDKLRAAMT EVRDLRTQGPRL
Sequences:
>Translated_172_residues MARDQQADASDAAEWFAGRLPDGWFSGAPEVIVDREEITVIGRLTAAEGEKESEAHAAGRASRFREETRAHRMRIADEAQ ARYGRKVSWGVDVGEDPDRILFTHIAVPVMTRLRQPERQVLDTLVEAGVARSRSDALAWAVRLVGEHTEEWLDKLRAAMT EVRDLRTQGPRL >Mature_171_residues ARDQQADASDAAEWFAGRLPDGWFSGAPEVIVDREEITVIGRLTAAEGEKESEAHAAGRASRFREETRAHRMRIADEAQA RYGRKVSWGVDVGEDPDRILFTHIAVPVMTRLRQPERQVLDTLVEAGVARSRSDALAWAVRLVGEHTEEWLDKLRAAMTE VRDLRTQGPRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19329; Mature: 19198
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARDQQADASDAAEWFAGRLPDGWFSGAPEVIVDREEITVIGRLTAAEGEKESEAHAAGR CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEECHHHHHHHHHHHHCCCCCHHHHHHHHH ASRFREETRAHRMRIADEAQARYGRKVSWGVDVGEDPDRILFTHIAVPVMTRLRQPERQV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHH LDTLVEAGVARSRSDALAWAVRLVGEHTEEWLDKLRAAMTEVRDLRTQGPRL HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure ARDQQADASDAAEWFAGRLPDGWFSGAPEVIVDREEITVIGRLTAAEGEKESEAHAAGR CCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEECHHHHHHHHHHHHCCCCCHHHHHHHHH ASRFREETRAHRMRIADEAQARYGRKVSWGVDVGEDPDRILFTHIAVPVMTRLRQPERQV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHH LDTLVEAGVARSRSDALAWAVRLVGEHTEEWLDKLRAAMTEVRDLRTQGPRL HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]