| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628485
Identifier: 169628485
GI number: 169628485
Start: 1393781
End: 1394542
Strand: Reverse
Name: 169628485
Synonym: MAB_1394c
Alternate gene names: NA
Gene position: 1394542-1393781 (Counterclockwise)
Preceding gene: 169628488
Following gene: 169628484
Centisome position: 27.52
GC content: 66.54
Gene sequence:
>762_bases ATGCCGATGAGCACTCGCATCACCGAACCGCAGCGGCAGCTCGCGTTGGGGGGCAAGAGCAAGGAGTCCAAGCCGGGCGC CTCGGGCAAGCTCCTCTCCCTCGTCCTGGACCAGAGCACCAAGGTTCAGGAGCCCGCGGTACGCGCATACGTCCAGAAGC TACGAGCCACTCACCCCACCGCGACACCCGCCGATGTCGTCGCGATGCTGGAGAAGCGATATCTGGCAACGGTGATGGGC AGCGGTGCGGCCGTCGGCGCGGCCGCCGCATTCCCCGGCGTAGGCACGCTGGCCGCGCTGTCGGCGACGGCCGGCGAGGC TGTGCTGTTCCTGGAGGCGACATCGCTGTTCACTTTGGCGCTGGCTGCCGTCCATGACATCGAACTCGCCAAGATCGAGC ATCGCCATACGCTGGTGCTCGCGGTTCTGCTCGGTGAGGACGGTGAGACCACGGTCTCGGACGTGCTGGGCAAGGAGCGC ACCGTCGGCGGAGGCTGGCTGGCCGAGGCCACCTCGACGCTGCCGGTGCCCGCGCTCAGTCATCTCAACGCCACGCTACT CAAGCGGTTCACCAAGAAATTCGCCGTGAAGCGTGGAGCCATGGCGGCGGGCAAGCTGTTGCCGGCCGGAATCGGGGCCG TGATCGGCGCGGGCGGCAACCGCTTTATCGGCAAGAGAATAATCACGAACGCACGCAATGCCTTTGGAGAACCCCCGACG GCATGGCCGGTGCAGCTGCGACTGGTAGCACCGGACAGCTAA
Upstream 100 bases:
>100_bases TGAGGAACGAAAGACACTCGCCATTCGTCTTCACTACTGTGAGAACAGATCTTCGCTCACAACCAGTGGACCCACCCAGA CCACAGCACTGAAGGAACAC
Downstream 100 bases:
>100_bases GCAGGACAGGGGTGGCCGTTCACCGGGAGTCCACCCCTGAGCCATCAGTGGCGCCGATGATGTCGCCCCTGTCATGGAAC GGCGACATGCCGCCCCCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MPMSTRITEPQRQLALGGKSKESKPGASGKLLSLVLDQSTKVQEPAVRAYVQKLRATHPTATPADVVAMLEKRYLATVMG SGAAVGAAAAFPGVGTLAALSATAGEAVLFLEATSLFTLALAAVHDIELAKIEHRHTLVLAVLLGEDGETTVSDVLGKER TVGGGWLAEATSTLPVPALSHLNATLLKRFTKKFAVKRGAMAAGKLLPAGIGAVIGAGGNRFIGKRIITNARNAFGEPPT AWPVQLRLVAPDS
Sequences:
>Translated_253_residues MPMSTRITEPQRQLALGGKSKESKPGASGKLLSLVLDQSTKVQEPAVRAYVQKLRATHPTATPADVVAMLEKRYLATVMG SGAAVGAAAAFPGVGTLAALSATAGEAVLFLEATSLFTLALAAVHDIELAKIEHRHTLVLAVLLGEDGETTVSDVLGKER TVGGGWLAEATSTLPVPALSHLNATLLKRFTKKFAVKRGAMAAGKLLPAGIGAVIGAGGNRFIGKRIITNARNAFGEPPT AWPVQLRLVAPDS >Mature_252_residues PMSTRITEPQRQLALGGKSKESKPGASGKLLSLVLDQSTKVQEPAVRAYVQKLRATHPTATPADVVAMLEKRYLATVMGS GAAVGAAAAFPGVGTLAALSATAGEAVLFLEATSLFTLALAAVHDIELAKIEHRHTLVLAVLLGEDGETTVSDVLGKERT VGGGWLAEATSTLPVPALSHLNATLLKRFTKKFAVKRGAMAAGKLLPAGIGAVIGAGGNRFIGKRIITNARNAFGEPPTA WPVQLRLVAPDS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26200; Mature: 26069
Theoretical pI: Translated: 10.66; Mature: 10.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMSTRITEPQRQLALGGKSKESKPGASGKLLSLVLDQSTKVQEPAVRAYVQKLRATHPT CCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHEECCCCCCCCCHHHHHHHHHHHHCCCC ATPADVVAMLEKRYLATVMGSGAAVGAAAAFPGVGTLAALSATAGEAVLFLEATSLFTLA CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHCCCCEEEEEEHHHHHHHH LAAVHDIELAKIEHRHTLVLAVLLGEDGETTVSDVLGKERTVGGGWLAEATSTLPVPALS HHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHCCCCCCCCCHHHHCCCCCCCHHHH HLNATLLKRFTKKFAVKRGAMAAGKLLPAGIGAVIGAGGNRFIGKRIITNARNAFGEPPT HHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHEEECCCCHHHHHHHHHHHHHHCCCCCC AWPVQLRLVAPDS CCEEEEEEECCCC >Mature Secondary Structure PMSTRITEPQRQLALGGKSKESKPGASGKLLSLVLDQSTKVQEPAVRAYVQKLRATHPT CCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHEECCCCCCCCCHHHHHHHHHHHHCCCC ATPADVVAMLEKRYLATVMGSGAAVGAAAAFPGVGTLAALSATAGEAVLFLEATSLFTLA CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHCCCCEEEEEEHHHHHHHH LAAVHDIELAKIEHRHTLVLAVLLGEDGETTVSDVLGKERTVGGGWLAEATSTLPVPALS HHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHCCCCCCCCCHHHHCCCCCCCHHHH HLNATLLKRFTKKFAVKRGAMAAGKLLPAGIGAVIGAGGNRFIGKRIITNARNAFGEPPT HHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHEEECCCCHHHHHHHHHHHHHHCCCCCC AWPVQLRLVAPDS CCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA