| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628483
Identifier: 169628483
GI number: 169628483
Start: 1388413
End: 1389732
Strand: Reverse
Name: 169628483
Synonym: MAB_1392c
Alternate gene names: NA
Gene position: 1389732-1388413 (Counterclockwise)
Preceding gene: 169628484
Following gene: 169628481
Centisome position: 27.43
GC content: 66.82
Gene sequence:
>1320_bases ATGACGGCCGGTACCGCGCCCAGGCCTGCTCCGGCAACGCCCTCGATCGACGAATGGCCGCTGCAGGTCGACAAGCCGTT GTCGGCTGCCTACGACCCCTTCTTCGGCCCGGCGCCGCAGGGATGGGAAGGCACCGCACCGGGGACACCGCTGCGACGCC GCCGAGTGCGGCTCGGGCTCTTCGGCCTCATTCCGCTGAAGCTGCATGCCTGGCAGGTCCTCTATCGCAGCACCGACTTG CATGGCAATCCGGAAACCACGGTCACCACGGTGGTCGTACCGCAGCGTGCGACGGCGGACTCGCCGCTACTGGCCTTCCA GAGCGCCATCGACGCCGTCACGCCCAAACGGTTCCCGTCGTATTACCTGCAGCAGGGATCCTTTGGCCTGACCCAGTCTC AGAACGAATTCCTGCTGGTGGTGGCCGCACTCACCAAAGGATGGGTGGTCACCATCAGCGACCACGAGGGACCGCACGGG CTTTGGATGGTGGCCCGCCAGCCCGGGTACCACGTGCTCGACGGCCTGCGCGCCACCATCGCGGCGTCCGGCGACGACGG CATCCCGCAGCTGAGCTGGCAAACCCCCGTCGCAGTGTGGGGATACTCCGGTGGCGGCACCGCGACAGCTTGGGCGGCGG AGCTGGCGGGTGAATACGCCCCGGAGCTGAACATGGTGGGCGCGCTGATCGGGGCGCCCGCCGCACAACCCGGCCCGCTC GTGCACTACCACTGCGCCCGGCCCGCCTCAGGCCTGATCATCCCGGTGCTCGCGGCGATGATGCGTGCTCATCCGCCGGC CCGCGAGTTCCTGGAGCGCCACCTCAACCGCAGGGGACGCCGAATCGTCGAGAAGTCCGAGCGCATGACGCTCCTGGAGA CGGTGCTGCGCTGGCCATTCCTGGACTTCAACAAGATCCTGGACCGCCCCCTCGAAGAAGTCATGGATGGGCCGGAGATC ACCGCACTCACCGATGAGATGACGTTGGGGCAACGGACGCCGACCGCACCGGTGTATCTGTATCACCCGATACACGACCT GCTGCTGCCGATTCAGTACACCGATCAGCTCGCCGAGGATTACATCGCCGGAGGCGCTCATGTCACGTATCGACGCGATC GCGCGTCCGAGCACATCGTGTTGGCTCTGGCCGGCGGCTCGGACGCCCTCGCCTGGCTGGATGAACGGCTGACCGGCAAG GCATTACCCGCGAGATCGGATGTCCAGACGGTGTTCTCCACCTCATTGACCCTGCGGGCCATCCGGATGTTCATGCGCTG GCAGCGGGGGATCATCCAGCTGCTCAGCGGGAAGCTCTGA
Upstream 100 bases:
>100_bases CATTGCGTTGTCATGCGCCGCAACCGGTCAATACGCTGCGCAAGGTAGTGAACTGTGCTCACGACCGGATAGGACCGCCA GTGCAAGGACAACAGGCTCG
Downstream 100 bases:
>100_bases TTCTCAGCGTGCCTTGACCGCCAAGAGCGCCGCGGCGAGCGTCCGCGCCGCGGACGGTTGCGCCGGATCCAATCCGGTCA GCTCGGCAACCCGGCGCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 439; Mature: 438
Protein sequence:
>439_residues MTAGTAPRPAPATPSIDEWPLQVDKPLSAAYDPFFGPAPQGWEGTAPGTPLRRRRVRLGLFGLIPLKLHAWQVLYRSTDL HGNPETTVTTVVVPQRATADSPLLAFQSAIDAVTPKRFPSYYLQQGSFGLTQSQNEFLLVVAALTKGWVVTISDHEGPHG LWMVARQPGYHVLDGLRATIAASGDDGIPQLSWQTPVAVWGYSGGGTATAWAAELAGEYAPELNMVGALIGAPAAQPGPL VHYHCARPASGLIIPVLAAMMRAHPPAREFLERHLNRRGRRIVEKSERMTLLETVLRWPFLDFNKILDRPLEEVMDGPEI TALTDEMTLGQRTPTAPVYLYHPIHDLLLPIQYTDQLAEDYIAGGAHVTYRRDRASEHIVLALAGGSDALAWLDERLTGK ALPARSDVQTVFSTSLTLRAIRMFMRWQRGIIQLLSGKL
Sequences:
>Translated_439_residues MTAGTAPRPAPATPSIDEWPLQVDKPLSAAYDPFFGPAPQGWEGTAPGTPLRRRRVRLGLFGLIPLKLHAWQVLYRSTDL HGNPETTVTTVVVPQRATADSPLLAFQSAIDAVTPKRFPSYYLQQGSFGLTQSQNEFLLVVAALTKGWVVTISDHEGPHG LWMVARQPGYHVLDGLRATIAASGDDGIPQLSWQTPVAVWGYSGGGTATAWAAELAGEYAPELNMVGALIGAPAAQPGPL VHYHCARPASGLIIPVLAAMMRAHPPAREFLERHLNRRGRRIVEKSERMTLLETVLRWPFLDFNKILDRPLEEVMDGPEI TALTDEMTLGQRTPTAPVYLYHPIHDLLLPIQYTDQLAEDYIAGGAHVTYRRDRASEHIVLALAGGSDALAWLDERLTGK ALPARSDVQTVFSTSLTLRAIRMFMRWQRGIIQLLSGKL >Mature_438_residues TAGTAPRPAPATPSIDEWPLQVDKPLSAAYDPFFGPAPQGWEGTAPGTPLRRRRVRLGLFGLIPLKLHAWQVLYRSTDLH GNPETTVTTVVVPQRATADSPLLAFQSAIDAVTPKRFPSYYLQQGSFGLTQSQNEFLLVVAALTKGWVVTISDHEGPHGL WMVARQPGYHVLDGLRATIAASGDDGIPQLSWQTPVAVWGYSGGGTATAWAAELAGEYAPELNMVGALIGAPAAQPGPLV HYHCARPASGLIIPVLAAMMRAHPPAREFLERHLNRRGRRIVEKSERMTLLETVLRWPFLDFNKILDRPLEEVMDGPEIT ALTDEMTLGQRTPTAPVYLYHPIHDLLLPIQYTDQLAEDYIAGGAHVTYRRDRASEHIVLALAGGSDALAWLDERLTGKA LPARSDVQTVFSTSLTLRAIRMFMRWQRGIIQLLSGKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. Lipase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005152 [H]
Pfam domain/function: PF03583 LIP [H]
EC number: NA
Molecular weight: Translated: 48182; Mature: 48051
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAGTAPRPAPATPSIDEWPLQVDKPLSAAYDPFFGPAPQGWEGTAPGTPLRRRRVRLGL CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH FGLIPLKLHAWQVLYRSTDLHGNPETTVTTVVVPQRATADSPLLAFQSAIDAVTPKRFPS EEEHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCH YYLQQGSFGLTQSQNEFLLVVAALTKGWVVTISDHEGPHGLWMVARQPGYHVLDGLRATI HHHHCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCEEEEEECCCHHHHHCCHHEE AASGDDGIPQLSWQTPVAVWGYSGGGTATAWAAELAGEYAPELNMVGALIGAPAAQPGPL EECCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCE VHYHCARPASGLIIPVLAAMMRAHPPAREFLERHLNRRGRRIVEKSERMTLLETVLRWPF EEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LDFNKILDRPLEEVMDGPEITALTDEMTLGQRTPTAPVYLYHPIHDLLLPIQYTDQLAED CCHHHHHHHHHHHHHCCCCEEEEECCHHCCCCCCCCCEEEECCHHHHHCCHHHHHHHHHH YIAGGAHVTYRRDRASEHIVLALAGGSDALAWLDERLTGKALPARSDVQTVFSTSLTLRA HHCCCCEEEEECCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH IRMFMRWQRGIIQLLSGKL HHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TAGTAPRPAPATPSIDEWPLQVDKPLSAAYDPFFGPAPQGWEGTAPGTPLRRRRVRLGL CCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH FGLIPLKLHAWQVLYRSTDLHGNPETTVTTVVVPQRATADSPLLAFQSAIDAVTPKRFPS EEEHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCH YYLQQGSFGLTQSQNEFLLVVAALTKGWVVTISDHEGPHGLWMVARQPGYHVLDGLRATI HHHHCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCEEEEEECCCHHHHHCCHHEE AASGDDGIPQLSWQTPVAVWGYSGGGTATAWAAELAGEYAPELNMVGALIGAPAAQPGPL EECCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCE VHYHCARPASGLIIPVLAAMMRAHPPAREFLERHLNRRGRRIVEKSERMTLLETVLRWPF EEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LDFNKILDRPLEEVMDGPEITALTDEMTLGQRTPTAPVYLYHPIHDLLLPIQYTDQLAED CCHHHHHHHHHHHHHCCCCEEEEECCHHCCCCCCCCCEEEECCHHHHHCCHHHHHHHHHH YIAGGAHVTYRRDRASEHIVLALAGGSDALAWLDERLTGKALPARSDVQTVFSTSLTLRA HHCCCCEEEEECCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH IRMFMRWQRGIIQLLSGKL HHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]