Click here to switch to the map view.

The map label for this gene is ychE [C]

Identifier: 169628474

GI number: 169628474

Start: 1379075

End: 1379698

Strand: Direct

Name: ychE [C]

Synonym: MAB_1383

Alternate gene names: 169628474

Gene position: 1379075-1379698 (Clockwise)

Preceding gene: 169628473

Following gene: 169628475

Centisome position: 27.22

GC content: 67.47

Gene sequence:

>624_bases
GTGGCCTTCGATATCGCGGTGTTCACCTCAGTGTTCATCACCCTTGTGGTCATCATGGACCCGCCGGGGGCGGTCCCGGT
CTTCTTGTCGCTGACGGGGCGACTGCCCGCTCCCGAACGCCATCGGGCCGCATGGCAGGCCCCCGCGGTGTCGTTGACCG
TTATCTCGATGTTCGCGATCGGCGGGCAGGCGATTCTGGCGTACCTACATATCGGTGTGCCCGCGCTACAGGGCGCGGGC
GGTCTGCTGCTGCTCATCACCGGCTTGTCGTTGTTGATGGGCGGGGCCACCAGTCATGACGCCGACAGCGGCGTCAATGT
GGCCTTGGTGCCGCTGGGTACTCCGTTGATGGCGGGCCCGGGGGCCATCGCGGCGACCATCATCGCGGTCCGCCAGGCCG
GCCAGAGTGATGGCGCGCAGGCACCGGCGCTTGTGGCCATCGCCGCGGCGATTCTCTGCGTGCACGTGGTGCTGTATCTG
ACGCTGCGGTTCTCGACGGTGCTGATCAGGGTGCTGCGGGACGGCGGAATCATGCTCTTGGCGCGGGTCGCCGGTCTGCT
GCTGGCGGCCATCGCGGTGCAGATGATCGCCGAGTCGGTACGCGGATTCGTGGCGGGCGCGTAA

Upstream 100 bases:

>100_bases
ACAATCACATTCGCATACCGGCTAGGTAAGAATCCGACGGTGGCGCGACTGTTGGGCAGGTAACCCGCGAACCTGTGCGA
GCGCCTGGAAGACTGACCCG

Downstream 100 bases:

>100_bases
CGGGCCGCTCACAGTTCCAGAGTCGCCACCAGTGACATGCAAGGGGGACAGTAGTCTCACGCTGTGACTGCATCCGACGT
TGTTGTGACAGATGAAGAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MAFDIAVFTSVFITLVVIMDPPGAVPVFLSLTGRLPAPERHRAAWQAPAVSLTVISMFAIGGQAILAYLHIGVPALQGAG
GLLLLITGLSLLMGGATSHDADSGVNVALVPLGTPLMAGPGAIAATIIAVRQAGQSDGAQAPALVAIAAAILCVHVVLYL
TLRFSTVLIRVLRDGGIMLLARVAGLLLAAIAVQMIAESVRGFVAGA

Sequences:

>Translated_207_residues
MAFDIAVFTSVFITLVVIMDPPGAVPVFLSLTGRLPAPERHRAAWQAPAVSLTVISMFAIGGQAILAYLHIGVPALQGAG
GLLLLITGLSLLMGGATSHDADSGVNVALVPLGTPLMAGPGAIAATIIAVRQAGQSDGAQAPALVAIAAAILCVHVVLYL
TLRFSTVLIRVLRDGGIMLLARVAGLLLAAIAVQMIAESVRGFVAGA
>Mature_206_residues
AFDIAVFTSVFITLVVIMDPPGAVPVFLSLTGRLPAPERHRAAWQAPAVSLTVISMFAIGGQAILAYLHIGVPALQGAGG
LLLLITGLSLLMGGATSHDADSGVNVALVPLGTPLMAGPGAIAATIIAVRQAGQSDGAQAPALVAIAAAILCVHVVLYLT
LRFSTVLIRVLRDGGIMLLARVAGLLLAAIAVQMIAESVRGFVAGA

Specific function: Unknown

COG id: COG2095

COG function: function code U; Multiple antibiotic transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0056 (marC) family [H]

Homologues:

Organism=Escherichia coli, GI1787494, Length=214, Percent_Identity=32.2429906542056, Blast_Score=91, Evalue=6e-20,
Organism=Escherichia coli, GI1787809, Length=194, Percent_Identity=29.3814432989691, Blast_Score=76, Evalue=1e-15,
Organism=Escherichia coli, GI1789842, Length=197, Percent_Identity=27.4111675126904, Blast_Score=74, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002771 [H]

Pfam domain/function: PF01914 MarC [H]

EC number: NA

Molecular weight: Translated: 20930; Mature: 20799

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFDIAVFTSVFITLVVIMDPPGAVPVFLSLTGRLPAPERHRAAWQAPAVSLTVISMFAI
CCCHHHHHHHHHHHHHHEECCCCCCEEEEEECCCCCCCHHHHHHHCCCCHHHHHHHHHHH
GGQAILAYLHIGVPALQGAGGLLLLITGLSLLMGGATSHDADSGVNVALVPLGTPLMAGP
HHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCC
GAIAATIIAVRQAGQSDGAQAPALVAIAAAILCVHVVLYLTLRFSTVLIRVLRDGGIMLL
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
ARVAGLLLAAIAVQMIAESVRGFVAGA
HHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AFDIAVFTSVFITLVVIMDPPGAVPVFLSLTGRLPAPERHRAAWQAPAVSLTVISMFAI
CCHHHHHHHHHHHHHHEECCCCCCEEEEEECCCCCCCHHHHHHHCCCCHHHHHHHHHHH
GGQAILAYLHIGVPALQGAGGLLLLITGLSLLMGGATSHDADSGVNVALVPLGTPLMAGP
HHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCC
GAIAATIIAVRQAGQSDGAQAPALVAIAAAILCVHVVLYLTLRFSTVLIRVLRDGGIMLL
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
ARVAGLLLAAIAVQMIAESVRGFVAGA
HHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]