| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is mrp [H]
Identifier: 169628457
GI number: 169628457
Start: 1363060
End: 1364196
Strand: Reverse
Name: mrp [H]
Synonym: MAB_1366c
Alternate gene names: 169628457
Gene position: 1364196-1363060 (Counterclockwise)
Preceding gene: 169628458
Following gene: 169628452
Centisome position: 26.92
GC content: 67.11
Gene sequence:
>1137_bases GTGACATCCGAGCTCACCACGGCCGTGCGCAGCGCACTCGCCGGGGTTATCGATCCTGAACTTCGCCGTCCCATCACCGA GTTGGGGATGGTCAAGGACATCACGTTCGACGACGCCCACAACGTCGAGATCGGCATCTACCTCACCACCTCCGGCTGTC CGAAGAAGGCCGAGATCGCCGAGCGGGTGACGCAGGCCGCCGCCGATGTCGATGGCGTAGGCACCGTGCGGGTGCAACTG GACGTCATGAACGACGAACAGCGCACCGAACTGCGTAAGCAACTGCGGGGTGACAGCCCCGAGCCGGTTATCCCATTCGC CCAGCCCGGCTCTCTCACCCGCGTCTACGCAGTGGCCTCCGGTAAGGGCGGCGTCGGAAAGTCCAGCGTCACAGTGAACC TCGCTGCCGCGATGGCCGCCAAGGGTTTGTCCGTCGGGCTGCTCGACGCCGACATCTACGGCCACTCGGTGCCACGCATG ATGGGCACCTCCGACCGGCCCACCCAGGTGGAACGGATGATCCTGCCCCCCGTGGCCCACGACGTGAAGGTCATCTCGAT CGCCCAGTTCACCCAGGGCAACACCCCGGTGGTGTGGCGCGGGCCCATGCTGCACCGCGCGCTGCAACAGTTCCTGGCCG ACGTTTTCTGGGGCGACCTGGATGTGCTGCTGCTGGACCTGCCGCCGGGCACCGGCGACGTCGCGATTTCGGTGGCGCAG CTGATACCCGGTGCGGAGATCCTGGTTGTCACCACCCCGCAGCAAGCCGCCGCCGAGGTGGCTGAGCGCGCGGGCGCGAT CGCGACTCAAACTCGTCAACGCATCGTCGGCGTGGTCGAGAACATGTCCTGGCTGGTGCTGCCCGACGGCACTCGCATGG AGGTGTTCGGGTCCGGTGGCGGCGACACTGTCGCCGAAAGCCTGACCAAGGTGGTGGGGACGAAGGTGCCGCTACTCGGC CAAGTTCCGCTGGACCCGGCGGTGCGCGAGGGTGGCGACGACGGCCTGCCGATCGTGCTCAGTCAGCCGGATTCGGCCGC AGGCCAAGCTCTTCGGGCAGTCGCGGACAAGTTGTCGACGCGCAGCCGCGGCCTGGCGGGCATGTCGCTGAACATCGATA CGGCACGCCGTAACTGA
Upstream 100 bases:
>100_bases TTGCCCCGCCGCCACCCCCGGTGGAGCTGGGACCGGCGCCCGGACCCGCGCCCGCACCGGCAGCGCCGAGGCCGTAAACG GCACGCCCTAGACTCGGGTA
Downstream 100 bases:
>100_bases CCCTTCCCGCGCGAGCATGCTCAAATGTGCCTGTTTCGGCGTGAATCGGGCACATTTGAGCATGCTCGCGGACAGGGTGG GGGTGGACGCGGGTTACGTC
Product: putative Mrp homolog protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 378; Mature: 377
Protein sequence:
>378_residues MTSELTTAVRSALAGVIDPELRRPITELGMVKDITFDDAHNVEIGIYLTTSGCPKKAEIAERVTQAAADVDGVGTVRVQL DVMNDEQRTELRKQLRGDSPEPVIPFAQPGSLTRVYAVASGKGGVGKSSVTVNLAAAMAAKGLSVGLLDADIYGHSVPRM MGTSDRPTQVERMILPPVAHDVKVISIAQFTQGNTPVVWRGPMLHRALQQFLADVFWGDLDVLLLDLPPGTGDVAISVAQ LIPGAEILVVTTPQQAAAEVAERAGAIATQTRQRIVGVVENMSWLVLPDGTRMEVFGSGGGDTVAESLTKVVGTKVPLLG QVPLDPAVREGGDDGLPIVLSQPDSAAGQALRAVADKLSTRSRGLAGMSLNIDTARRN
Sequences:
>Translated_378_residues MTSELTTAVRSALAGVIDPELRRPITELGMVKDITFDDAHNVEIGIYLTTSGCPKKAEIAERVTQAAADVDGVGTVRVQL DVMNDEQRTELRKQLRGDSPEPVIPFAQPGSLTRVYAVASGKGGVGKSSVTVNLAAAMAAKGLSVGLLDADIYGHSVPRM MGTSDRPTQVERMILPPVAHDVKVISIAQFTQGNTPVVWRGPMLHRALQQFLADVFWGDLDVLLLDLPPGTGDVAISVAQ LIPGAEILVVTTPQQAAAEVAERAGAIATQTRQRIVGVVENMSWLVLPDGTRMEVFGSGGGDTVAESLTKVVGTKVPLLG QVPLDPAVREGGDDGLPIVLSQPDSAAGQALRAVADKLSTRSRGLAGMSLNIDTARRN >Mature_377_residues TSELTTAVRSALAGVIDPELRRPITELGMVKDITFDDAHNVEIGIYLTTSGCPKKAEIAERVTQAAADVDGVGTVRVQLD VMNDEQRTELRKQLRGDSPEPVIPFAQPGSLTRVYAVASGKGGVGKSSVTVNLAAAMAAKGLSVGLLDADIYGHSVPRMM GTSDRPTQVERMILPPVAHDVKVISIAQFTQGNTPVVWRGPMLHRALQQFLADVFWGDLDVLLLDLPPGTGDVAISVAQL IPGAEILVVTTPQQAAAEVAERAGAIATQTRQRIVGVVENMSWLVLPDGTRMEVFGSGGGDTVAESLTKVVGTKVPLLGQ VPLDPAVREGGDDGLPIVLSQPDSAAGQALRAVADKLSTRSRGLAGMSLNIDTARRN
Specific function: Not Known. [C]
COG id: COG0489
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the Mrp/NBP35 ATP-binding proteins family [H]
Homologues:
Organism=Homo sapiens, GI157384956, Length=278, Percent_Identity=37.410071942446, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI6912540, Length=264, Percent_Identity=38.6363636363636, Blast_Score=152, Evalue=4e-37, Organism=Homo sapiens, GI118572611, Length=251, Percent_Identity=34.2629482071713, Blast_Score=141, Evalue=1e-33, Organism=Escherichia coli, GI87082045, Length=363, Percent_Identity=34.7107438016529, Blast_Score=182, Evalue=2e-47, Organism=Caenorhabditis elegans, GI25143050, Length=255, Percent_Identity=37.2549019607843, Blast_Score=140, Evalue=9e-34, Organism=Saccharomyces cerevisiae, GI6322188, Length=243, Percent_Identity=36.6255144032922, Blast_Score=146, Evalue=5e-36, Organism=Saccharomyces cerevisiae, GI6321347, Length=271, Percent_Identity=34.6863468634686, Blast_Score=128, Evalue=1e-30, Organism=Drosophila melanogaster, GI221511043, Length=247, Percent_Identity=36.8421052631579, Blast_Score=169, Evalue=3e-42, Organism=Drosophila melanogaster, GI24667611, Length=256, Percent_Identity=35.546875, Blast_Score=144, Evalue=9e-35, Organism=Drosophila melanogaster, GI19921440, Length=254, Percent_Identity=33.8582677165354, Blast_Score=98, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019591 - InterPro: IPR002744 - InterPro: IPR000808 [H]
Pfam domain/function: PF01883 DUF59; PF10609 ParA [H]
EC number: NA
Molecular weight: Translated: 39785; Mature: 39654
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: PS01215 MRP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSELTTAVRSALAGVIDPELRRPITELGMVKDITFDDAHNVEIGIYLTTSGCPKKAEIA CCCHHHHHHHHHHHHHCCHHHHCCHHHHCCEEEECCCCCCCEEEEEEEECCCCCCHHHHH ERVTQAAADVDGVGTVRVQLDVMNDEQRTELRKQLRGDSPEPVIPFAQPGSLTRVYAVAS HHHHHHHCCCCCCEEEEEEEEECCCHHHHHHHHHHCCCCCCCEECCCCCCCCEEEEEEEC GKGGVGKSSVTVNLAAAMAAKGLSVGLLDADIYGHSVPRMMGTSDRPTQVERMILPPVAH CCCCCCCCEEEEEHHHHHHHCCCEEEEEECHHHCCCCHHHCCCCCCCCHHHHEECCCCCC DVKVISIAQFTQGNTPVVWRGPMLHRALQQFLADVFWGDLDVLLLDLPPGTGDVAISVAQ CEEEEEEEEECCCCCCEEECCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHEEHHH LIPGAEILVVTTPQQAAAEVAERAGAIATQTRQRIVGVVENMSWLVLPDGTRMEVFGSGG HCCCCEEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCC GDTVAESLTKVVGTKVPLLGQVPLDPAVREGGDDGLPIVLSQPDSAAGQALRAVADKLST CHHHHHHHHHHHCCCCCEEECCCCCHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHH RSRGLAGMSLNIDTARRN HHCCCEEEEEECCCCCCC >Mature Secondary Structure TSELTTAVRSALAGVIDPELRRPITELGMVKDITFDDAHNVEIGIYLTTSGCPKKAEIA CCHHHHHHHHHHHHHCCHHHHCCHHHHCCEEEECCCCCCCEEEEEEEECCCCCCHHHHH ERVTQAAADVDGVGTVRVQLDVMNDEQRTELRKQLRGDSPEPVIPFAQPGSLTRVYAVAS HHHHHHHCCCCCCEEEEEEEEECCCHHHHHHHHHHCCCCCCCEECCCCCCCCEEEEEEEC GKGGVGKSSVTVNLAAAMAAKGLSVGLLDADIYGHSVPRMMGTSDRPTQVERMILPPVAH CCCCCCCCEEEEEHHHHHHHCCCEEEEEECHHHCCCCHHHCCCCCCCCHHHHEECCCCCC DVKVISIAQFTQGNTPVVWRGPMLHRALQQFLADVFWGDLDVLLLDLPPGTGDVAISVAQ CEEEEEEEEECCCCCCEEECCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHEEHHH LIPGAEILVVTTPQQAAAEVAERAGAIATQTRQRIVGVVENMSWLVLPDGTRMEVFGSGG HCCCCEEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCC GDTVAESLTKVVGTKVPLLGQVPLDPAVREGGDDGLPIVLSQPDSAAGQALRAVADKLST CHHHHHHHHHHHCCCCCEEECCCCCHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHH RSRGLAGMSLNIDTARRN HHCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]