| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628447
Identifier: 169628447
GI number: 169628447
Start: 1354224
End: 1354922
Strand: Direct
Name: 169628447
Synonym: MAB_1356
Alternate gene names: NA
Gene position: 1354224-1354922 (Clockwise)
Preceding gene: 169628445
Following gene: 169628453
Centisome position: 26.73
GC content: 60.23
Gene sequence:
>699_bases ATGACAGTGAGCACGACGAATACCGATGATCAACTGCGTGACAGCCCAGACCTTTTGGTGCACCGCTATAAGTGGCTGCA GCGGCGTGAGCGGGCCGACTTGTTCGCGATCCTGGACGCGGGAACCATTGCGCATGTCGGTTTTGTCCGTCCTGACGGCA AGCCGATGGTCATCCCCATGGCGTACGCACGGGACGGCGAGTTCCTGCTCATGCATGGGTCTTCGGGTTCGGGACTGACG CGATCGGCCGTTGCGGGCGTTGAGCTGGTGGCCACGATCTCCATCTTCGATGGTCTTGTCTACGCACAGTCATTGTTTGA TTCAACGGTAAATTACCGCTGTGCAATGGTTTTCGGTAGAGCGGTGCCGGTCACGGAGCGGGAACGCGAAGATTGCATCC GCGTGATCTCCGAGCGCCTTATGCCCGGGCGTTGGACAGAAGTGCGGCCGCCGACGAAGCGGGAACTGGCCGCCACGTAT GTCTTGCGGATGCCGTTGGACATGTCCAGCGTTAAGGTACGTGAAGGGCAACCCACCGAGGACGCCCGTTCCGGAATATG GACGGGATATCTTCCCTTTGAGTCGGTGGTAGGCGAGCCGGTGCCCCAGTTGGGCGTCGATATTGTTCCGGCCCAATCCA TCACCATGGCTGCTGACGTGTGGAAGCAGCGGCTCCGGCGGCCTACATCAGCCGAGTGA
Upstream 100 bases:
>100_bases CGCCGCAGGTGACCCGTATCATTTCACACCGCACTGGACTGGTTGAAATCACCGAATGTGGTCTGTCGTCTCACCGCGGC CTCGCGAGACCATGTGTCAC
Downstream 100 bases:
>100_bases ATGTCAGGGGTGCCCTCACCACACCAGCGGTACCAGGCGGCTGCGCACCTTCTCGGTGTATTCGTCGTAGCCCTGCAGAT CATGGCGCAACATCTTCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MTVSTTNTDDQLRDSPDLLVHRYKWLQRRERADLFAILDAGTIAHVGFVRPDGKPMVIPMAYARDGEFLLMHGSSGSGLT RSAVAGVELVATISIFDGLVYAQSLFDSTVNYRCAMVFGRAVPVTEREREDCIRVISERLMPGRWTEVRPPTKRELAATY VLRMPLDMSSVKVREGQPTEDARSGIWTGYLPFESVVGEPVPQLGVDIVPAQSITMAADVWKQRLRRPTSAE
Sequences:
>Translated_232_residues MTVSTTNTDDQLRDSPDLLVHRYKWLQRRERADLFAILDAGTIAHVGFVRPDGKPMVIPMAYARDGEFLLMHGSSGSGLT RSAVAGVELVATISIFDGLVYAQSLFDSTVNYRCAMVFGRAVPVTEREREDCIRVISERLMPGRWTEVRPPTKRELAATY VLRMPLDMSSVKVREGQPTEDARSGIWTGYLPFESVVGEPVPQLGVDIVPAQSITMAADVWKQRLRRPTSAE >Mature_231_residues TVSTTNTDDQLRDSPDLLVHRYKWLQRRERADLFAILDAGTIAHVGFVRPDGKPMVIPMAYARDGEFLLMHGSSGSGLTR SAVAGVELVATISIFDGLVYAQSLFDSTVNYRCAMVFGRAVPVTEREREDCIRVISERLMPGRWTEVRPPTKRELAATYV LRMPLDMSSVKVREGQPTEDARSGIWTGYLPFESVVGEPVPQLGVDIVPAQSITMAADVWKQRLRRPTSAE
Specific function: Unknown
COG id: COG3467
COG function: function code R; Predicted flavin-nucleotide-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25855; Mature: 25724
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVSTTNTDDQLRDSPDLLVHRYKWLQRRERADLFAILDAGTIAHVGFVRPDGKPMVIPM CCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCEEEEECCCCEEEEEEECCCCCEEEEEE AYARDGEFLLMHGSSGSGLTRSAVAGVELVATISIFDGLVYAQSLFDSTVNYRCAMVFGR EEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECC AVPVTEREREDCIRVISERLMPGRWTEVRPPTKRELAATYVLRMPLDMSSVKVREGQPTE CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHEECCCCCCCEEECCCCCCH DARSGIWTGYLPFESVVGEPVPQLGVDIVPAQSITMAADVWKQRLRRPTSAE HHHCCCEECCCCHHHHHCCCCHHHCCEEECCCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TVSTTNTDDQLRDSPDLLVHRYKWLQRRERADLFAILDAGTIAHVGFVRPDGKPMVIPM CCCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCEEEEECCCCEEEEEEECCCCCEEEEEE AYARDGEFLLMHGSSGSGLTRSAVAGVELVATISIFDGLVYAQSLFDSTVNYRCAMVFGR EEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECC AVPVTEREREDCIRVISERLMPGRWTEVRPPTKRELAATYVLRMPLDMSSVKVREGQPTE CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHEECCCCCCCEEECCCCCCH DARSGIWTGYLPFESVVGEPVPQLGVDIVPAQSITMAADVWKQRLRRPTSAE HHHCCCEECCCCHHHHHCCCCHHHCCEEECCCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA