The gene/protein map for NC_004556 is currently unavailable.
Definition Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence.
Accession NC_010397
Length 5,067,172

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The map label for this gene is yjcS [H]

Identifier: 169628405

GI number: 169628405

Start: 1312024

End: 1313925

Strand: Direct

Name: yjcS [H]

Synonym: MAB_1312

Alternate gene names: 169628405

Gene position: 1312024-1313925 (Clockwise)

Preceding gene: 169628404

Following gene: 169628406

Centisome position: 25.89

GC content: 63.09

Gene sequence:

>1902_bases
ATGGCCGAGCAAACCCAGCCCACATCTCGCATCCTCGAACAGAATGCGGCCGCGGCGCAGGAACTCCCGTTCGCCAATAC
CGCCGACCAGGAAGACGCCGACCGGGGGTTCATCGCTGCGCTGGAGCCGGGAGTGGTTCGCGACGATTCAGGAAAGGTGG
TGTGGGACAACGATTCGTATGCGTTCCTGCAGGGCGCATGTCCAGGATCGGTGCACCCCAGCCTGTGGCGCCAGTGCGGG
CTAAACATCCGCCAAGGGCTCTACCACGTCACCGAGGGCATCTATCAGGTTCGGGGCCTGGACATCTCGAATATGACGCT
GGTCGAGGGTGAACGCGGAGTCATCGTGATCGACCCGTTGGTGTCCGTCGAGACCGCGGCCGCGGGGCTGGCGCTGTACC
GGCACCATCGCGGTGACCGTCCCGTGACCGGGTTGATCTATACGCACTCGCATGTGGACCATTTCGGGGGTGCACTCGGG
GTGACCAGCCCCGAGGATGTGGCGACCGGGCGCTGCCCCGTGCTGGCGCCTGCCGGCCTGCTGGAACATGCGGTGGCCGA
GAACGTGTACGCCGGACCCGCGATGACTCGTCGTGCCGTCTACATGTACGGCGCATTTCTGCCCAGAGGCCCGCTCGGGC
AGGTAGGAGCCGGCCTGGGGCAGACCAATTCGCTCGGCACCGTCACCTTGATCCCGCCAACCGTGGACATCACCCACACC
GGGCAAGAGGAGACGGTCGACGGTGTGCGCATGGTTTTCCAGCTCACGCCGGGCACCGAGGCCCCCGCCGAGATGAACTT
TCATTTTCCCGAGCGACGGGCGCTCTGCATGGCCGAGAACGCAACTCACACCCTGCACAATCTGTTGACATTGCGCGGCG
CGCTGGTACGCGATCCGCATGTCTGGGCGCGGTATATCACCGAGGCCATCAATCTGTACGCCCGTGACTCCGATGTGGTG
TTCGCCTCGCATCATTGGCCCACCTGGGGCACCGAACGTCTTGTGGAATACCTTGCCTTGCAGCGCGATTTGTATGCCTA
TCTGCACGATCAGACGTTGCGTATGCTCAACCAGGGACTGGTGGGTTCGGAGATCGCCGAAGATCTGCAACTGCCGCCGG
CGATCGCCGGCGCTTGGCACACGCGCGGCTACTACGGTTCGGTCAGCCACAACGTCAAGGCGATCTATCAGCGCTACATG
GGCTGGTTCGACGGTAACCCCGCGCACCTCTGGGAACATCCGCCCGTGGAGAACGCGCGGCGACATGTGGAATTCATGGG
CGGCGCTCAGGAGGTGCTGCGTAAGGCGCGTATCGCCTTTGAGCAGGGCGACTATCGATGGGTGGCCCAGGTGCTCAACT
ACGTGATCTTCGCGGATCCTGCCAATGACGCGGCGAAGGCATTGCAAGCCAACTGCTTTGAGCAACTCGGTTATGGCGCC
GAGAATGCCACTTGGCGCAACTTCTATTTGATGGGCGCCTATGAGTTACGCCATGGCAGCGTGGGCACACCGGTCTCGAT
CGGGTCGCCCTCGATGATGGCGGCGTTGAGCGTCGATCAAATCTTCGACGCACTCTCGTTGCGGGTCAATGGCCCCAAGG
CGTGGGACGAACGCTTTGTCAGCGACTGGCGATTCACCGACGAGGATCGGGTACACCGTGTGGAACTGCGTAACGGGGTG
CTGGTGCACTATGACCTGCCCGAGACTGCCAATGCGCCGCAGCCTGCGGTCGCCTTTACCCTTACTCGGACGGGGCTCGT
CAAACTTCTGTTGGCAGGGGAGGACCCTGGGCGACTGTTCGCCTCAGGGGAGATCACGGTGGAAGGCGATGCGAGCGGGT
TCGCGCGGCTGGTCTCGGTGCTTGATGAACCCGATCCAGGTTTTGCGATCGTGACGCCGTAG

Upstream 100 bases:

>100_bases
GACAGATTGTGGTCACAGCGGTTGCCTCGGCTCGATGAACGTGTTTGAGAGATAACGGCTTTCGCGGTCACGCGACAGCG
CCAGTGGGTACTATCGCGAT

Downstream 100 bases:

>100_bases
CCGGATGCGCGCATGTTGCCGCTAGCATTGGACGACAATGGTTTTCGGGGGTTTTGGGGGTGTTGCATTGGGTGAGCTGC
AGATCACGTTTGTCAGCGAG

Product: Beta-lactamase-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 633; Mature: 632

Protein sequence:

>633_residues
MAEQTQPTSRILEQNAAAAQELPFANTADQEDADRGFIAALEPGVVRDDSGKVVWDNDSYAFLQGACPGSVHPSLWRQCG
LNIRQGLYHVTEGIYQVRGLDISNMTLVEGERGVIVIDPLVSVETAAAGLALYRHHRGDRPVTGLIYTHSHVDHFGGALG
VTSPEDVATGRCPVLAPAGLLEHAVAENVYAGPAMTRRAVYMYGAFLPRGPLGQVGAGLGQTNSLGTVTLIPPTVDITHT
GQEETVDGVRMVFQLTPGTEAPAEMNFHFPERRALCMAENATHTLHNLLTLRGALVRDPHVWARYITEAINLYARDSDVV
FASHHWPTWGTERLVEYLALQRDLYAYLHDQTLRMLNQGLVGSEIAEDLQLPPAIAGAWHTRGYYGSVSHNVKAIYQRYM
GWFDGNPAHLWEHPPVENARRHVEFMGGAQEVLRKARIAFEQGDYRWVAQVLNYVIFADPANDAAKALQANCFEQLGYGA
ENATWRNFYLMGAYELRHGSVGTPVSIGSPSMMAALSVDQIFDALSLRVNGPKAWDERFVSDWRFTDEDRVHRVELRNGV
LVHYDLPETANAPQPAVAFTLTRTGLVKLLLAGEDPGRLFASGEITVEGDASGFARLVSVLDEPDPGFAIVTP

Sequences:

>Translated_633_residues
MAEQTQPTSRILEQNAAAAQELPFANTADQEDADRGFIAALEPGVVRDDSGKVVWDNDSYAFLQGACPGSVHPSLWRQCG
LNIRQGLYHVTEGIYQVRGLDISNMTLVEGERGVIVIDPLVSVETAAAGLALYRHHRGDRPVTGLIYTHSHVDHFGGALG
VTSPEDVATGRCPVLAPAGLLEHAVAENVYAGPAMTRRAVYMYGAFLPRGPLGQVGAGLGQTNSLGTVTLIPPTVDITHT
GQEETVDGVRMVFQLTPGTEAPAEMNFHFPERRALCMAENATHTLHNLLTLRGALVRDPHVWARYITEAINLYARDSDVV
FASHHWPTWGTERLVEYLALQRDLYAYLHDQTLRMLNQGLVGSEIAEDLQLPPAIAGAWHTRGYYGSVSHNVKAIYQRYM
GWFDGNPAHLWEHPPVENARRHVEFMGGAQEVLRKARIAFEQGDYRWVAQVLNYVIFADPANDAAKALQANCFEQLGYGA
ENATWRNFYLMGAYELRHGSVGTPVSIGSPSMMAALSVDQIFDALSLRVNGPKAWDERFVSDWRFTDEDRVHRVELRNGV
LVHYDLPETANAPQPAVAFTLTRTGLVKLLLAGEDPGRLFASGEITVEGDASGFARLVSVLDEPDPGFAIVTP
>Mature_632_residues
AEQTQPTSRILEQNAAAAQELPFANTADQEDADRGFIAALEPGVVRDDSGKVVWDNDSYAFLQGACPGSVHPSLWRQCGL
NIRQGLYHVTEGIYQVRGLDISNMTLVEGERGVIVIDPLVSVETAAAGLALYRHHRGDRPVTGLIYTHSHVDHFGGALGV
TSPEDVATGRCPVLAPAGLLEHAVAENVYAGPAMTRRAVYMYGAFLPRGPLGQVGAGLGQTNSLGTVTLIPPTVDITHTG
QEETVDGVRMVFQLTPGTEAPAEMNFHFPERRALCMAENATHTLHNLLTLRGALVRDPHVWARYITEAINLYARDSDVVF
ASHHWPTWGTERLVEYLALQRDLYAYLHDQTLRMLNQGLVGSEIAEDLQLPPAIAGAWHTRGYYGSVSHNVKAIYQRYMG
WFDGNPAHLWEHPPVENARRHVEFMGGAQEVLRKARIAFEQGDYRWVAQVLNYVIFADPANDAAKALQANCFEQLGYGAE
NATWRNFYLMGAYELRHGSVGTPVSIGSPSMMAALSVDQIFDALSLRVNGPKAWDERFVSDWRFTDEDRVHRVELRNGVL
VHYDLPETANAPQPAVAFTLTRTGLVKLLLAGEDPGRLFASGEITVEGDASGFARLVSVLDEPDPGFAIVTP

Specific function: Unknown

COG id: COG2015

COG function: function code Q; Alkyl sulfatase and related hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082368, Length=635, Percent_Identity=44.7244094488189, Blast_Score=561, Evalue=1e-161,
Organism=Saccharomyces cerevisiae, GI6324409, Length=634, Percent_Identity=45.2681388012618, Blast_Score=565, Evalue=1e-162,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279
- InterPro:   IPR003033 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 69492; Mature: 69361

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEQTQPTSRILEQNAAAAQELPFANTADQEDADRGFIAALEPGVVRDDSGKVVWDNDSY
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCEEECCCCCEEECCCCE
AFLQGACPGSVHPSLWRQCGLNIRQGLYHVTEGIYQVRGLDISNMTLVEGERGVIVIDPL
EEEECCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEECCC
VSVETAAAGLALYRHHRGDRPVTGLIYTHSHVDHFGGALGVTSPEDVATGRCPVLAPAGL
HHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHCCCCCCCCCCHHHCCCCCCCCCCHHH
LEHAVAENVYAGPAMTRRAVYMYGAFLPRGPLGQVGAGLGQTNSLGTVTLIPPTVDITHT
HHHHHHHCCCCCCHHHHHHHEEHHCCCCCCCCHHHCCCCCCCCCCCEEEEECCCEEEEEC
GQEETVDGVRMVFQLTPGTEAPAEMNFHFPERRALCMAENATHTLHNLLTLRGALVRDPH
CCHHHHCCEEEEEEECCCCCCCCCCCCCCCCHHEEEEECCCHHHHHHHHHHHHHHCCCHH
VWARYITEAINLYARDSDVVFASHHWPTWGTERLVEYLALQRDLYAYLHDQTLRMLNQGL
HHHHHHHHHHHHEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
VGSEIAEDLQLPPAIAGAWHTRGYYGSVSHNVKAIYQRYMGWFDGNPAHLWEHPPVENAR
CHHHHHHHHCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH
RHVEFMGGAQEVLRKARIAFEQGDYRWVAQVLNYVIFADPANDAAKALQANCFEQLGYGA
HHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHCCCC
ENATWRNFYLMGAYELRHGSVGTPVSIGSPSMMAALSVDQIFDALSLRVNGPKAWDERFV
CCCEEEEEEEEEEEEECCCCCCCCEECCCCHHHHHHHHHHHHHHHHEEECCCHHHHHHHH
SDWRFTDEDRVHRVELRNGVLVHYDLPETANAPQPAVAFTLTRTGLVKLLLAGEDPGRLF
HCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCEEEEEEHHCCEEEEEECCCCCCEE
ASGEITVEGDASGFARLVSVLDEPDPGFAIVTP
ECCEEEEECCCHHHHHHHHHHCCCCCCEEEECC
>Mature Secondary Structure 
AEQTQPTSRILEQNAAAAQELPFANTADQEDADRGFIAALEPGVVRDDSGKVVWDNDSY
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCEEECCCCCEEECCCCE
AFLQGACPGSVHPSLWRQCGLNIRQGLYHVTEGIYQVRGLDISNMTLVEGERGVIVIDPL
EEEECCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEECCC
VSVETAAAGLALYRHHRGDRPVTGLIYTHSHVDHFGGALGVTSPEDVATGRCPVLAPAGL
HHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHCCCCCCCCCCHHHCCCCCCCCCCHHH
LEHAVAENVYAGPAMTRRAVYMYGAFLPRGPLGQVGAGLGQTNSLGTVTLIPPTVDITHT
HHHHHHHCCCCCCHHHHHHHEEHHCCCCCCCCHHHCCCCCCCCCCCEEEEECCCEEEEEC
GQEETVDGVRMVFQLTPGTEAPAEMNFHFPERRALCMAENATHTLHNLLTLRGALVRDPH
CCHHHHCCEEEEEEECCCCCCCCCCCCCCCCHHEEEEECCCHHHHHHHHHHHHHHCCCHH
VWARYITEAINLYARDSDVVFASHHWPTWGTERLVEYLALQRDLYAYLHDQTLRMLNQGL
HHHHHHHHHHHHEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
VGSEIAEDLQLPPAIAGAWHTRGYYGSVSHNVKAIYQRYMGWFDGNPAHLWEHPPVENAR
CHHHHHHHHCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH
RHVEFMGGAQEVLRKARIAFEQGDYRWVAQVLNYVIFADPANDAAKALQANCFEQLGYGA
HHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHCCCC
ENATWRNFYLMGAYELRHGSVGTPVSIGSPSMMAALSVDQIFDALSLRVNGPKAWDERFV
CCCEEEEEEEEEEEEECCCCCCCCEECCCCHHHHHHHHHHHHHHHHEEECCCHHHHHHHH
SDWRFTDEDRVHRVELRNGVLVHYDLPETANAPQPAVAFTLTRTGLVKLLLAGEDPGRLF
HCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCEEEEEEHHCCEEEEEECCCCCCEE
ASGEITVEGDASGFARLVSVLDEPDPGFAIVTP
ECCEEEEECCCHHHHHHHHHHCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]