| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is yjcS [H]
Identifier: 169628405
GI number: 169628405
Start: 1312024
End: 1313925
Strand: Direct
Name: yjcS [H]
Synonym: MAB_1312
Alternate gene names: 169628405
Gene position: 1312024-1313925 (Clockwise)
Preceding gene: 169628404
Following gene: 169628406
Centisome position: 25.89
GC content: 63.09
Gene sequence:
>1902_bases ATGGCCGAGCAAACCCAGCCCACATCTCGCATCCTCGAACAGAATGCGGCCGCGGCGCAGGAACTCCCGTTCGCCAATAC CGCCGACCAGGAAGACGCCGACCGGGGGTTCATCGCTGCGCTGGAGCCGGGAGTGGTTCGCGACGATTCAGGAAAGGTGG TGTGGGACAACGATTCGTATGCGTTCCTGCAGGGCGCATGTCCAGGATCGGTGCACCCCAGCCTGTGGCGCCAGTGCGGG CTAAACATCCGCCAAGGGCTCTACCACGTCACCGAGGGCATCTATCAGGTTCGGGGCCTGGACATCTCGAATATGACGCT GGTCGAGGGTGAACGCGGAGTCATCGTGATCGACCCGTTGGTGTCCGTCGAGACCGCGGCCGCGGGGCTGGCGCTGTACC GGCACCATCGCGGTGACCGTCCCGTGACCGGGTTGATCTATACGCACTCGCATGTGGACCATTTCGGGGGTGCACTCGGG GTGACCAGCCCCGAGGATGTGGCGACCGGGCGCTGCCCCGTGCTGGCGCCTGCCGGCCTGCTGGAACATGCGGTGGCCGA GAACGTGTACGCCGGACCCGCGATGACTCGTCGTGCCGTCTACATGTACGGCGCATTTCTGCCCAGAGGCCCGCTCGGGC AGGTAGGAGCCGGCCTGGGGCAGACCAATTCGCTCGGCACCGTCACCTTGATCCCGCCAACCGTGGACATCACCCACACC GGGCAAGAGGAGACGGTCGACGGTGTGCGCATGGTTTTCCAGCTCACGCCGGGCACCGAGGCCCCCGCCGAGATGAACTT TCATTTTCCCGAGCGACGGGCGCTCTGCATGGCCGAGAACGCAACTCACACCCTGCACAATCTGTTGACATTGCGCGGCG CGCTGGTACGCGATCCGCATGTCTGGGCGCGGTATATCACCGAGGCCATCAATCTGTACGCCCGTGACTCCGATGTGGTG TTCGCCTCGCATCATTGGCCCACCTGGGGCACCGAACGTCTTGTGGAATACCTTGCCTTGCAGCGCGATTTGTATGCCTA TCTGCACGATCAGACGTTGCGTATGCTCAACCAGGGACTGGTGGGTTCGGAGATCGCCGAAGATCTGCAACTGCCGCCGG CGATCGCCGGCGCTTGGCACACGCGCGGCTACTACGGTTCGGTCAGCCACAACGTCAAGGCGATCTATCAGCGCTACATG GGCTGGTTCGACGGTAACCCCGCGCACCTCTGGGAACATCCGCCCGTGGAGAACGCGCGGCGACATGTGGAATTCATGGG CGGCGCTCAGGAGGTGCTGCGTAAGGCGCGTATCGCCTTTGAGCAGGGCGACTATCGATGGGTGGCCCAGGTGCTCAACT ACGTGATCTTCGCGGATCCTGCCAATGACGCGGCGAAGGCATTGCAAGCCAACTGCTTTGAGCAACTCGGTTATGGCGCC GAGAATGCCACTTGGCGCAACTTCTATTTGATGGGCGCCTATGAGTTACGCCATGGCAGCGTGGGCACACCGGTCTCGAT CGGGTCGCCCTCGATGATGGCGGCGTTGAGCGTCGATCAAATCTTCGACGCACTCTCGTTGCGGGTCAATGGCCCCAAGG CGTGGGACGAACGCTTTGTCAGCGACTGGCGATTCACCGACGAGGATCGGGTACACCGTGTGGAACTGCGTAACGGGGTG CTGGTGCACTATGACCTGCCCGAGACTGCCAATGCGCCGCAGCCTGCGGTCGCCTTTACCCTTACTCGGACGGGGCTCGT CAAACTTCTGTTGGCAGGGGAGGACCCTGGGCGACTGTTCGCCTCAGGGGAGATCACGGTGGAAGGCGATGCGAGCGGGT TCGCGCGGCTGGTCTCGGTGCTTGATGAACCCGATCCAGGTTTTGCGATCGTGACGCCGTAG
Upstream 100 bases:
>100_bases GACAGATTGTGGTCACAGCGGTTGCCTCGGCTCGATGAACGTGTTTGAGAGATAACGGCTTTCGCGGTCACGCGACAGCG CCAGTGGGTACTATCGCGAT
Downstream 100 bases:
>100_bases CCGGATGCGCGCATGTTGCCGCTAGCATTGGACGACAATGGTTTTCGGGGGTTTTGGGGGTGTTGCATTGGGTGAGCTGC AGATCACGTTTGTCAGCGAG
Product: Beta-lactamase-like
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 633; Mature: 632
Protein sequence:
>633_residues MAEQTQPTSRILEQNAAAAQELPFANTADQEDADRGFIAALEPGVVRDDSGKVVWDNDSYAFLQGACPGSVHPSLWRQCG LNIRQGLYHVTEGIYQVRGLDISNMTLVEGERGVIVIDPLVSVETAAAGLALYRHHRGDRPVTGLIYTHSHVDHFGGALG VTSPEDVATGRCPVLAPAGLLEHAVAENVYAGPAMTRRAVYMYGAFLPRGPLGQVGAGLGQTNSLGTVTLIPPTVDITHT GQEETVDGVRMVFQLTPGTEAPAEMNFHFPERRALCMAENATHTLHNLLTLRGALVRDPHVWARYITEAINLYARDSDVV FASHHWPTWGTERLVEYLALQRDLYAYLHDQTLRMLNQGLVGSEIAEDLQLPPAIAGAWHTRGYYGSVSHNVKAIYQRYM GWFDGNPAHLWEHPPVENARRHVEFMGGAQEVLRKARIAFEQGDYRWVAQVLNYVIFADPANDAAKALQANCFEQLGYGA ENATWRNFYLMGAYELRHGSVGTPVSIGSPSMMAALSVDQIFDALSLRVNGPKAWDERFVSDWRFTDEDRVHRVELRNGV LVHYDLPETANAPQPAVAFTLTRTGLVKLLLAGEDPGRLFASGEITVEGDASGFARLVSVLDEPDPGFAIVTP
Sequences:
>Translated_633_residues MAEQTQPTSRILEQNAAAAQELPFANTADQEDADRGFIAALEPGVVRDDSGKVVWDNDSYAFLQGACPGSVHPSLWRQCG LNIRQGLYHVTEGIYQVRGLDISNMTLVEGERGVIVIDPLVSVETAAAGLALYRHHRGDRPVTGLIYTHSHVDHFGGALG VTSPEDVATGRCPVLAPAGLLEHAVAENVYAGPAMTRRAVYMYGAFLPRGPLGQVGAGLGQTNSLGTVTLIPPTVDITHT GQEETVDGVRMVFQLTPGTEAPAEMNFHFPERRALCMAENATHTLHNLLTLRGALVRDPHVWARYITEAINLYARDSDVV FASHHWPTWGTERLVEYLALQRDLYAYLHDQTLRMLNQGLVGSEIAEDLQLPPAIAGAWHTRGYYGSVSHNVKAIYQRYM GWFDGNPAHLWEHPPVENARRHVEFMGGAQEVLRKARIAFEQGDYRWVAQVLNYVIFADPANDAAKALQANCFEQLGYGA ENATWRNFYLMGAYELRHGSVGTPVSIGSPSMMAALSVDQIFDALSLRVNGPKAWDERFVSDWRFTDEDRVHRVELRNGV LVHYDLPETANAPQPAVAFTLTRTGLVKLLLAGEDPGRLFASGEITVEGDASGFARLVSVLDEPDPGFAIVTP >Mature_632_residues AEQTQPTSRILEQNAAAAQELPFANTADQEDADRGFIAALEPGVVRDDSGKVVWDNDSYAFLQGACPGSVHPSLWRQCGL NIRQGLYHVTEGIYQVRGLDISNMTLVEGERGVIVIDPLVSVETAAAGLALYRHHRGDRPVTGLIYTHSHVDHFGGALGV TSPEDVATGRCPVLAPAGLLEHAVAENVYAGPAMTRRAVYMYGAFLPRGPLGQVGAGLGQTNSLGTVTLIPPTVDITHTG QEETVDGVRMVFQLTPGTEAPAEMNFHFPERRALCMAENATHTLHNLLTLRGALVRDPHVWARYITEAINLYARDSDVVF ASHHWPTWGTERLVEYLALQRDLYAYLHDQTLRMLNQGLVGSEIAEDLQLPPAIAGAWHTRGYYGSVSHNVKAIYQRYMG WFDGNPAHLWEHPPVENARRHVEFMGGAQEVLRKARIAFEQGDYRWVAQVLNYVIFADPANDAAKALQANCFEQLGYGAE NATWRNFYLMGAYELRHGSVGTPVSIGSPSMMAALSVDQIFDALSLRVNGPKAWDERFVSDWRFTDEDRVHRVELRNGVL VHYDLPETANAPQPAVAFTLTRTGLVKLLLAGEDPGRLFASGEITVEGDASGFARLVSVLDEPDPGFAIVTP
Specific function: Unknown
COG id: COG2015
COG function: function code Q; Alkyl sulfatase and related hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082368, Length=635, Percent_Identity=44.7244094488189, Blast_Score=561, Evalue=1e-161, Organism=Saccharomyces cerevisiae, GI6324409, Length=634, Percent_Identity=45.2681388012618, Blast_Score=565, Evalue=1e-162,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 - InterPro: IPR003033 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 69492; Mature: 69361
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEQTQPTSRILEQNAAAAQELPFANTADQEDADRGFIAALEPGVVRDDSGKVVWDNDSY CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCEEECCCCCEEECCCCE AFLQGACPGSVHPSLWRQCGLNIRQGLYHVTEGIYQVRGLDISNMTLVEGERGVIVIDPL EEEECCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEECCC VSVETAAAGLALYRHHRGDRPVTGLIYTHSHVDHFGGALGVTSPEDVATGRCPVLAPAGL HHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHCCCCCCCCCCHHHCCCCCCCCCCHHH LEHAVAENVYAGPAMTRRAVYMYGAFLPRGPLGQVGAGLGQTNSLGTVTLIPPTVDITHT HHHHHHHCCCCCCHHHHHHHEEHHCCCCCCCCHHHCCCCCCCCCCCEEEEECCCEEEEEC GQEETVDGVRMVFQLTPGTEAPAEMNFHFPERRALCMAENATHTLHNLLTLRGALVRDPH CCHHHHCCEEEEEEECCCCCCCCCCCCCCCCHHEEEEECCCHHHHHHHHHHHHHHCCCHH VWARYITEAINLYARDSDVVFASHHWPTWGTERLVEYLALQRDLYAYLHDQTLRMLNQGL HHHHHHHHHHHHEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC VGSEIAEDLQLPPAIAGAWHTRGYYGSVSHNVKAIYQRYMGWFDGNPAHLWEHPPVENAR CHHHHHHHHCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH RHVEFMGGAQEVLRKARIAFEQGDYRWVAQVLNYVIFADPANDAAKALQANCFEQLGYGA HHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHCCCC ENATWRNFYLMGAYELRHGSVGTPVSIGSPSMMAALSVDQIFDALSLRVNGPKAWDERFV CCCEEEEEEEEEEEEECCCCCCCCEECCCCHHHHHHHHHHHHHHHHEEECCCHHHHHHHH SDWRFTDEDRVHRVELRNGVLVHYDLPETANAPQPAVAFTLTRTGLVKLLLAGEDPGRLF HCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCEEEEEEHHCCEEEEEECCCCCCEE ASGEITVEGDASGFARLVSVLDEPDPGFAIVTP ECCEEEEECCCHHHHHHHHHHCCCCCCEEEECC >Mature Secondary Structure AEQTQPTSRILEQNAAAAQELPFANTADQEDADRGFIAALEPGVVRDDSGKVVWDNDSY CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCEEECCCCCEEECCCCE AFLQGACPGSVHPSLWRQCGLNIRQGLYHVTEGIYQVRGLDISNMTLVEGERGVIVIDPL EEEECCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEECCC VSVETAAAGLALYRHHRGDRPVTGLIYTHSHVDHFGGALGVTSPEDVATGRCPVLAPAGL HHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHCCCCCCCCCCHHHCCCCCCCCCCHHH LEHAVAENVYAGPAMTRRAVYMYGAFLPRGPLGQVGAGLGQTNSLGTVTLIPPTVDITHT HHHHHHHCCCCCCHHHHHHHEEHHCCCCCCCCHHHCCCCCCCCCCCEEEEECCCEEEEEC GQEETVDGVRMVFQLTPGTEAPAEMNFHFPERRALCMAENATHTLHNLLTLRGALVRDPH CCHHHHCCEEEEEEECCCCCCCCCCCCCCCCHHEEEEECCCHHHHHHHHHHHHHHCCCHH VWARYITEAINLYARDSDVVFASHHWPTWGTERLVEYLALQRDLYAYLHDQTLRMLNQGL HHHHHHHHHHHHEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC VGSEIAEDLQLPPAIAGAWHTRGYYGSVSHNVKAIYQRYMGWFDGNPAHLWEHPPVENAR CHHHHHHHHCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH RHVEFMGGAQEVLRKARIAFEQGDYRWVAQVLNYVIFADPANDAAKALQANCFEQLGYGA HHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHCCCC ENATWRNFYLMGAYELRHGSVGTPVSIGSPSMMAALSVDQIFDALSLRVNGPKAWDERFV CCCEEEEEEEEEEEEECCCCCCCCEECCCCHHHHHHHHHHHHHHHHEEECCCHHHHHHHH SDWRFTDEDRVHRVELRNGVLVHYDLPETANAPQPAVAFTLTRTGLVKLLLAGEDPGRLF HCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCEEEEEEHHCCEEEEEECCCCCCEE ASGEITVEGDASGFARLVSVLDEPDPGFAIVTP ECCEEEEECCCHHHHHHHHHHCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503 [H]