| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628386
Identifier: 169628386
GI number: 169628386
Start: 1297207
End: 1297728
Strand: Reverse
Name: 169628386
Synonym: MAB_1293c
Alternate gene names: NA
Gene position: 1297728-1297207 (Counterclockwise)
Preceding gene: 169628387
Following gene: 169628385
Centisome position: 25.61
GC content: 61.69
Gene sequence:
>522_bases ATGACCAAATACGCCGCGCTGCTTCGTGGAGTGAACGTCGGCGGCATCACGATGAAGATGGCCGACGTGCGCGATGCTCT TGAGACCGCCGGATTCGCCGGTGTGACAACGGTTCTGGCCAGCGGCAACGTACTATTGGATGCCGACGAACCCGCGGCGA CGGTGAAAGAGCGTCTGCAGCAAGTGCTCGGTGAGCGTTTCGGGTACGAGGCGTGGGTGCTGGTGTACGACCTGGACACC ATCGCCCGAATCATCGCGGCGTTCCCCTGGGAGCCAGAGATCGAGGGCGTGCATTCGTACGTGATGTTCTGCAGCGACCC GGTAGTGCTTACCGAGTTGGCAGCCCTGGAGAGCGAGCTCGACGAAAGCGAACAGATCGCCGCCGGTGACGGGGTGTTGT ATTGGCAAGTACCCAAGTCGCAGACCCTGGGCAGCCCCGTCGGCAAGACCACCGGCAAGAAGCGTTACAAGTCGACGACC ACCACCCGCAACTTACGCACGTTGCACAAGCTCGTTCGCTAG
Upstream 100 bases:
>100_bases ACAGCCACGACGAAGTGCGACGCATCGCCCAGCGCGTGCTGCCCGGCGCCCGGCTACAGCGCCTCGTACTGTGGCGTCAC CTGCTCACCTGGGAGAAATC
Downstream 100 bases:
>100_bases TAGGGTGGCGTACATGGCCGCCATTGATGCCCGCCACCTCGACGGGGTGTCCGAGACCGCACTCATCACGCTGAATCAGC GGGCCACCGAGGCCAACCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MTKYAALLRGVNVGGITMKMADVRDALETAGFAGVTTVLASGNVLLDADEPAATVKERLQQVLGERFGYEAWVLVYDLDT IARIIAAFPWEPEIEGVHSYVMFCSDPVVLTELAALESELDESEQIAAGDGVLYWQVPKSQTLGSPVGKTTGKKRYKSTT TTRNLRTLHKLVR
Sequences:
>Translated_173_residues MTKYAALLRGVNVGGITMKMADVRDALETAGFAGVTTVLASGNVLLDADEPAATVKERLQQVLGERFGYEAWVLVYDLDT IARIIAAFPWEPEIEGVHSYVMFCSDPVVLTELAALESELDESEQIAAGDGVLYWQVPKSQTLGSPVGKTTGKKRYKSTT TTRNLRTLHKLVR >Mature_172_residues TKYAALLRGVNVGGITMKMADVRDALETAGFAGVTTVLASGNVLLDADEPAATVKERLQQVLGERFGYEAWVLVYDLDTI ARIIAAFPWEPEIEGVHSYVMFCSDPVVLTELAALESELDESEQIAAGDGVLYWQVPKSQTLGSPVGKTTGKKRYKSTTT TRNLRTLHKLVR
Specific function: Unknown
COG id: COG3797
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18892; Mature: 18761
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKYAALLRGVNVGGITMKMADVRDALETAGFAGVTTVLASGNVLLDADEPAATVKERLQ CCHHHHHHHCCCCCCEEEHHHHHHHHHHHCCCHHHHHHHHCCCEEEECCCCHHHHHHHHH QVLGERFGYEAWVLVYDLDTIARIIAAFPWEPEIEGVHSYVMFCSDPVVLTELAALESEL HHHHHHCCCCEEEEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHC DESEQIAAGDGVLYWQVPKSQTLGSPVGKTTGKKRYKSTTTTRNLRTLHKLVR CCCHHEECCCCEEEEECCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHC >Mature Secondary Structure TKYAALLRGVNVGGITMKMADVRDALETAGFAGVTTVLASGNVLLDADEPAATVKERLQ CHHHHHHHCCCCCCEEEHHHHHHHHHHHCCCHHHHHHHHCCCEEEECCCCHHHHHHHHH QVLGERFGYEAWVLVYDLDTIARIIAAFPWEPEIEGVHSYVMFCSDPVVLTELAALESEL HHHHHHCCCCEEEEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHC DESEQIAAGDGVLYWQVPKSQTLGSPVGKTTGKKRYKSTTTTRNLRTLHKLVR CCCHHEECCCCEEEEECCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA