| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628378
Identifier: 169628378
GI number: 169628378
Start: 1288633
End: 1290981
Strand: Reverse
Name: 169628378
Synonym: MAB_1285c
Alternate gene names: NA
Gene position: 1290981-1288633 (Counterclockwise)
Preceding gene: 169628379
Following gene: 169628377
Centisome position: 25.48
GC content: 59.26
Gene sequence:
>2349_bases ATGGGGATGACACTGGCCGAACTGCAGGAATGGCCGCCACATATCAAGGCGCTCGCAGACGCGGCATCCAAGCGTGGTGA TGCCAGCCAGCAGGCGGCGGACAAGGTACAGGCGATCGTCGATATGTCCACGTGGCAGGGCGATGCCGGCGAGGCCGCAA GGGACGCGATGAAACGCTCGGCCGCCCGCTTCGACAATGCTGGTTTCGAGGCGCTTTATGTCGCGATGCATGCCAATAAG GCCTATGGAGAGTCGCAAACATTGGCCGATGACATCGGGGCCTTCTTGGCGTACGCCGCAGCTCCCCCGAAGGTGGATAT CAATCCCAAGACCAATGCGGTGACGCCCCCGGACATCAGCGGGCTGAATAAAGAACAGCTACAGAAGGTCATCGACAAGC TGAAGGATCTCCAGCAGCGAGTGACCGGCCTCGTGGCCCGTGGCGAGATGTTGGACGACTCCCTGGCTCGGGTGCTCGAC GAAGGCACCGGCGGGCACACCATGGCCCAGAAACAGATCGCTGAGGGGACACCTGAACAAGCCGAACGCGATGTCCACGA CGTTCTCGCCGGAACCGCCACCGAAGAGCAAAAGGCGCGTGTCCAGGCAGCATCAATCCTTAGCCCGGAGCAGATCGCGG ATCGCGATGCGGGCCGGCCAGTGCAGTTGACGCGTCCGCAGCAGCAGGTGTTGGGTCAGCTGCAGGCACAGATGAACGGA ATGTCGGTGGAGGACATTCACCGGGCCGAACAGCGGTTGGGTAACAACAAGAGCATTATCGGCAACGCACTGCAGATGAT GGGTTCGAATCAATACGGCTACGCGAAGACCGAATTACGGCCCGGCGCACAGGGATCCACTACCGAACTCACAACAGGCG GGTATGACAAGCTGCCTACCTCGGTTCAAGAGGCGTTGAATGACAAATCTCCCGGCTTCAGCTACGTGTCTCAGGGCCCC GGCCAGGGAACCGCTCCCATTACCCAAGGATCAACCCTTGGCAACCTGGACAGGCTTTCGGATGTCATCAAAGACGGGGA TCCCGGTTTCCAAAACGGTACCGAGCTCGATCGAAGGCTCATGCAACGCGGTGCAGACATCTTGCACTTCGAGAATCAAA ATCACGACAGCCACGAAGGCGCCGCGGACTCGACGATTCAGAACATATTCTCTTCGGCTGGCCGGGACCACATTGTCGAT CACGACATGATGGTCAACCCGGAAGGTAAGCGTAATGACCAGTTCCTAGGTGATTTGACGCATCATCAATTCACCGACGG CGGCAAGGCTGCGGGCAGTTTGATGAGCTGGACTCACGACTCAGCTCACGTGGGGCCGGGAGTCTCCGCGGATCAGGCCA AACTCTCCGGGGAAACTGCGCACGCGTATGCCAGTTATGTGGCCGATCACAAGGAATTGAACGCGCTGCCCGCCAACGAC AACCAGGGCCTCGGCCAAGGAACGAAGACACTCGGCCAACTCAGCCCCGAGTTGGTGAAAGGCATGGCCTGGGGCCTGGC GCCATACACAGCCGCCATCGGTGGCGGCGATCCCGCGATATTCGGCAGCACTCCAGGTTTCGACAATGCTTTGGATACCG ATGACGCCATTGGCAATGGTTCCATGCCGCAGGCCAAGGCACTTTTCAAGGTGCTGAGCACGAATGCGGAAGCAGCCACC ACGCTAGGTGGAGCGCTCTACGGGGACTCGGTTATGGCCACGAATCACTACGCAGAAGCGGTAAAGCATTCTGGTGTAGG CGAAATCGGAGACCTGGATCAGGCGGGGAGATTCCGTGGCCTGGCAGACGCTGGATTGGCCGCAGGCAACGATGCACAAC ATAAGGCTGACACGGTCTCCAAGGAGCAATACGCTAAGGACCTACAGAGACTGAAAGAGACCGCGTACGGCGCCATCACC AAGATCCTGCCGATACCGGCGGAAGCAGCTACTCCTTTTGGAATCATGTCCGACGCTCTCAAGGACAGCATCGTCGGGAA GGCGCCCGAACCCGGCCAGCCCGCAAACACGACGGTACCGAATTTGAATCCGGCGTACGGCCAGCAGCAACTGCTGAACG CATACGCGGCCACGGGAGTCCTACGGCCCGAACAGTTCCCCCCGAATATGCTCGTGCCGGACCCCAAACACCCGGGAGTA ATGCGGGTGGGCACCTTGGAGGAATTGCGACAGATGAAGGGACCGGACGATCGTCCCGTTTACGAGCACCTGACTTCAGA CAAATACCACACCATGGTCAATGAAGCCCTTCGCCGGATACCAGGGGATGCAGGCTCTGCTCAGCCGCTGATTGATGCAT ACAACAACGCTGTAAAGACAACCGAATGA
Upstream 100 bases:
>100_bases GGTCACATCTCGTCTGCCCAGAAGTTCGTGGCGCGCGATGAGGCCAATCGCGACCTGATCAAGCGCGCGGGACCGGAAGG CAAGGTTTAGGGGGACTCGT
Downstream 100 bases:
>100_bases CCCACCCTCGGAAAAGGCACGCAGGGGCCCGCATACTATTCGGCTTGCTGGCGACGATCGTTTCGATGTCGGCGGGTTGC ACGCCCACTGAGCAACCACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 782; Mature: 781
Protein sequence:
>782_residues MGMTLAELQEWPPHIKALADAASKRGDASQQAADKVQAIVDMSTWQGDAGEAARDAMKRSAARFDNAGFEALYVAMHANK AYGESQTLADDIGAFLAYAAAPPKVDINPKTNAVTPPDISGLNKEQLQKVIDKLKDLQQRVTGLVARGEMLDDSLARVLD EGTGGHTMAQKQIAEGTPEQAERDVHDVLAGTATEEQKARVQAASILSPEQIADRDAGRPVQLTRPQQQVLGQLQAQMNG MSVEDIHRAEQRLGNNKSIIGNALQMMGSNQYGYAKTELRPGAQGSTTELTTGGYDKLPTSVQEALNDKSPGFSYVSQGP GQGTAPITQGSTLGNLDRLSDVIKDGDPGFQNGTELDRRLMQRGADILHFENQNHDSHEGAADSTIQNIFSSAGRDHIVD HDMMVNPEGKRNDQFLGDLTHHQFTDGGKAAGSLMSWTHDSAHVGPGVSADQAKLSGETAHAYASYVADHKELNALPAND NQGLGQGTKTLGQLSPELVKGMAWGLAPYTAAIGGGDPAIFGSTPGFDNALDTDDAIGNGSMPQAKALFKVLSTNAEAAT TLGGALYGDSVMATNHYAEAVKHSGVGEIGDLDQAGRFRGLADAGLAAGNDAQHKADTVSKEQYAKDLQRLKETAYGAIT KILPIPAEAATPFGIMSDALKDSIVGKAPEPGQPANTTVPNLNPAYGQQQLLNAYAATGVLRPEQFPPNMLVPDPKHPGV MRVGTLEELRQMKGPDDRPVYEHLTSDKYHTMVNEALRRIPGDAGSAQPLIDAYNNAVKTTE
Sequences:
>Translated_782_residues MGMTLAELQEWPPHIKALADAASKRGDASQQAADKVQAIVDMSTWQGDAGEAARDAMKRSAARFDNAGFEALYVAMHANK AYGESQTLADDIGAFLAYAAAPPKVDINPKTNAVTPPDISGLNKEQLQKVIDKLKDLQQRVTGLVARGEMLDDSLARVLD EGTGGHTMAQKQIAEGTPEQAERDVHDVLAGTATEEQKARVQAASILSPEQIADRDAGRPVQLTRPQQQVLGQLQAQMNG MSVEDIHRAEQRLGNNKSIIGNALQMMGSNQYGYAKTELRPGAQGSTTELTTGGYDKLPTSVQEALNDKSPGFSYVSQGP GQGTAPITQGSTLGNLDRLSDVIKDGDPGFQNGTELDRRLMQRGADILHFENQNHDSHEGAADSTIQNIFSSAGRDHIVD HDMMVNPEGKRNDQFLGDLTHHQFTDGGKAAGSLMSWTHDSAHVGPGVSADQAKLSGETAHAYASYVADHKELNALPAND NQGLGQGTKTLGQLSPELVKGMAWGLAPYTAAIGGGDPAIFGSTPGFDNALDTDDAIGNGSMPQAKALFKVLSTNAEAAT TLGGALYGDSVMATNHYAEAVKHSGVGEIGDLDQAGRFRGLADAGLAAGNDAQHKADTVSKEQYAKDLQRLKETAYGAIT KILPIPAEAATPFGIMSDALKDSIVGKAPEPGQPANTTVPNLNPAYGQQQLLNAYAATGVLRPEQFPPNMLVPDPKHPGV MRVGTLEELRQMKGPDDRPVYEHLTSDKYHTMVNEALRRIPGDAGSAQPLIDAYNNAVKTTE >Mature_781_residues GMTLAELQEWPPHIKALADAASKRGDASQQAADKVQAIVDMSTWQGDAGEAARDAMKRSAARFDNAGFEALYVAMHANKA YGESQTLADDIGAFLAYAAAPPKVDINPKTNAVTPPDISGLNKEQLQKVIDKLKDLQQRVTGLVARGEMLDDSLARVLDE GTGGHTMAQKQIAEGTPEQAERDVHDVLAGTATEEQKARVQAASILSPEQIADRDAGRPVQLTRPQQQVLGQLQAQMNGM SVEDIHRAEQRLGNNKSIIGNALQMMGSNQYGYAKTELRPGAQGSTTELTTGGYDKLPTSVQEALNDKSPGFSYVSQGPG QGTAPITQGSTLGNLDRLSDVIKDGDPGFQNGTELDRRLMQRGADILHFENQNHDSHEGAADSTIQNIFSSAGRDHIVDH DMMVNPEGKRNDQFLGDLTHHQFTDGGKAAGSLMSWTHDSAHVGPGVSADQAKLSGETAHAYASYVADHKELNALPANDN QGLGQGTKTLGQLSPELVKGMAWGLAPYTAAIGGGDPAIFGSTPGFDNALDTDDAIGNGSMPQAKALFKVLSTNAEAATT LGGALYGDSVMATNHYAEAVKHSGVGEIGDLDQAGRFRGLADAGLAAGNDAQHKADTVSKEQYAKDLQRLKETAYGAITK ILPIPAEAATPFGIMSDALKDSIVGKAPEPGQPANTTVPNLNPAYGQQQLLNAYAATGVLRPEQFPPNMLVPDPKHPGVM RVGTLEELRQMKGPDDRPVYEHLTSDKYHTMVNEALRRIPGDAGSAQPLIDAYNNAVKTTE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83006; Mature: 82875
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGMTLAELQEWPPHIKALADAASKRGDASQQAADKVQAIVDMSTWQGDAGEAARDAMKRS CCCCHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH AARFDNAGFEALYVAMHANKAYGESQTLADDIGAFLAYAAAPPKVDINPKTNAVTPPDIS HHHHCCCCCEEEEEEECCCHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC GLNKEQLQKVIDKLKDLQQRVTGLVARGEMLDDSLARVLDEGTGGHTMAQKQIAEGTPEQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHH AERDVHDVLAGTATEEQKARVQAASILSPEQIADRDAGRPVQLTRPQQQVLGQLQAQMNG HHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHCCCCCCEEECCHHHHHHHHHHHHHCC MSVEDIHRAEQRLGNNKSIIGNALQMMGSNQYGYAKTELRPGAQGSTTELTTGGYDKLPT CCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCCCHHCCH SVQEALNDKSPGFSYVSQGPGQGTAPITQGSTLGNLDRLSDVIKDGDPGFQNGTELDRRL HHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHH MQRGADILHFENQNHDSHEGAADSTIQNIFSSAGRDHIVDHDMMVNPEGKRNDQFLGDLT HHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCHHHHHHH HHQFTDGGKAAGSLMSWTHDSAHVGPGVSADQAKLSGETAHAYASYVADHKELNALPAND HHHCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHCCCCCCCC NQGLGQGTKTLGQLSPELVKGMAWGLAPYTAAIGGGDPAIFGSTPGFDNALDTDDAIGNG CCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCC SMPQAKALFKVLSTNAEAATTLGGALYGDSVMATNHYAEAVKHSGVGEIGDLDQAGRFRG CCHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHCC LADAGLAAGNDAQHKADTVSKEQYAKDLQRLKETAYGAITKILPIPAEAATPFGIMSDAL CHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHH KDSIVGKAPEPGQPANTTVPNLNPAYGQQQLLNAYAATGVLRPEQFPPNMLVPDPKHPGV HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCE MRVGTLEELRQMKGPDDRPVYEHLTSDKYHTMVNEALRRIPGDAGSAQPLIDAYNNAVKT EECCCHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHCCHHCC TE CC >Mature Secondary Structure GMTLAELQEWPPHIKALADAASKRGDASQQAADKVQAIVDMSTWQGDAGEAARDAMKRS CCCHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH AARFDNAGFEALYVAMHANKAYGESQTLADDIGAFLAYAAAPPKVDINPKTNAVTPPDIS HHHHCCCCCEEEEEEECCCHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC GLNKEQLQKVIDKLKDLQQRVTGLVARGEMLDDSLARVLDEGTGGHTMAQKQIAEGTPEQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHH AERDVHDVLAGTATEEQKARVQAASILSPEQIADRDAGRPVQLTRPQQQVLGQLQAQMNG HHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHCCCCCCEEECCHHHHHHHHHHHHHCC MSVEDIHRAEQRLGNNKSIIGNALQMMGSNQYGYAKTELRPGAQGSTTELTTGGYDKLPT CCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCCCHHCCH SVQEALNDKSPGFSYVSQGPGQGTAPITQGSTLGNLDRLSDVIKDGDPGFQNGTELDRRL HHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHH MQRGADILHFENQNHDSHEGAADSTIQNIFSSAGRDHIVDHDMMVNPEGKRNDQFLGDLT HHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCHHHHHHH HHQFTDGGKAAGSLMSWTHDSAHVGPGVSADQAKLSGETAHAYASYVADHKELNALPAND HHHCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHCCCCCCCC NQGLGQGTKTLGQLSPELVKGMAWGLAPYTAAIGGGDPAIFGSTPGFDNALDTDDAIGNG CCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCC SMPQAKALFKVLSTNAEAATTLGGALYGDSVMATNHYAEAVKHSGVGEIGDLDQAGRFRG CCHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHCC LADAGLAAGNDAQHKADTVSKEQYAKDLQRLKETAYGAITKILPIPAEAATPFGIMSDAL CHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHH KDSIVGKAPEPGQPANTTVPNLNPAYGQQQLLNAYAATGVLRPEQFPPNMLVPDPKHPGV HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCE MRVGTLEELRQMKGPDDRPVYEHLTSDKYHTMVNEALRRIPGDAGSAQPLIDAYNNAVKT EECCCHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHCCHHCC TE CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA