| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628371
Identifier: 169628371
GI number: 169628371
Start: 1283471
End: 1284805
Strand: Direct
Name: 169628371
Synonym: MAB_1278
Alternate gene names: NA
Gene position: 1283471-1284805 (Clockwise)
Preceding gene: 169628370
Following gene: 169628372
Centisome position: 25.33
GC content: 67.72
Gene sequence:
>1335_bases ATGACGATCGAACAGATGGCCCCGCGCGACGCCCAGATGTATTGGATGTCCACGAAAATCCCCAACGATCAGTTCCTGCT GTTCTGCTTCGATTCGCCGACAGCCGACCTCGATACCGTGCGCTCGGTGATCGCGGCCCGCGCGGCCCGGATCGCGGACC TGCGGGTACGGGCCGTCGACGTCGCCGGGCACCTCGATTACCCGTACTGGGTTCCGCGTGATGAGTCGCAGCTCCCGCTG ACGGTGCATACGCTGGCCGATGCCAGCTGGCCGCAGTGTCGATCGGCCGTGGCCGCGCTGCTGTCCAGCACTGTCGATAT CCGCGAAAGCCCATGGCATTTACATCTTTTCCCGGGCGTGAAGGGGGCGCCGCAGGTTCCCGGTCCGGCACTTGTCGCGG TGCTGCAGGTGTCGCACGCCCTGGCCGACGGGCAGCGCTCCACCGCTGCCGCGCGCGCATTGTTCGGAGACGGGATGCCG ATGAGTGGCTCGTTGCCCGCGGTTCCTGCGCTCGCCACCGTGCGTGCTCTGGTGGGTTTCCCGGTGAAGTTGGGACGATT GCTGCGCGCGAGCAGGGACGGGTACCGGGCCTACAAGAGGCAGCAGGAGCTTGTGTCGGCCGGTGCGTTGGAGCCGGAAC CGCAAGGCTTCCCACTGATTTCGCTCAATGCCCGGCCCGATCATCGTCGGGAAATCCGGATGATCGTGCGTCCTCGGGAG GAACTTCGTGCCGCCGGAGTCAGCGTGACCGTCGCGGTCATGACGGCGATTGCCGCCGCACTACCGCGGTACCTACGTGA TCACGGCCAGTGGGTGCCGGACAGGTTGGGTGCTGAGGTGACCGTCGCTGAGCCTGGAGAGTCTGCGGCCCGCAACAACT TCCGCAACGTCGGCGTGGACCTGTGCTGGGACGAGCCCGACTTGCGCGTCCGGGCCCGCCGGATCGCCGACGGTATCGAA AGCAGGCGCCGTCGTGCCGCGCACCCGGTCCTGGTGGCCCAGCGTGCGGGTGGCTCGGCACTTCCCGCGCCGATGATGTG GGCGGGCGTGAGCGCCTTCGACGCCGACCTCATGCCGCCCACGGTCGCGGGCAACACCGTGGTGTCGAGTGTGGTGCGCG GTGCCGCCGATCTTGTCCTCGGCGGGGGCCGGGTGGCGTTCACCGCCGGGTTCCCGGCGCTGTCGCCGGTGATGGGGCTG ACGCATGGTGTGCACGGGATCGGTGACACTGTCACAGTGAGTGTGCACACGAGTGCGGCGGTGCTGCCCGACGCTGACCA TTACGAAGCCTTGTTGGCCGGCGCTCTTGACGAGGTTTCCCGCCAGCTGCGATGA
Upstream 100 bases:
>100_bases GCGGCGGGTGAGGACGAGGCACATGTGTATCGGTACTACGGCAGAATTGCGCCGTGGCAACAGCTATGGGACGACTGGCG CACCTACAAGTAGGCGTTCG
Downstream 100 bases:
>100_bases GTTTTGGTACCGGCACCGGTCGATACCGGTATGCCAACAATTACTCCTTGCCTATGGTTCGACACCCAAGCCGAAGAGGC CGCCAACTTCTACGTGTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 444; Mature: 443
Protein sequence:
>444_residues MTIEQMAPRDAQMYWMSTKIPNDQFLLFCFDSPTADLDTVRSVIAARAARIADLRVRAVDVAGHLDYPYWVPRDESQLPL TVHTLADASWPQCRSAVAALLSSTVDIRESPWHLHLFPGVKGAPQVPGPALVAVLQVSHALADGQRSTAAARALFGDGMP MSGSLPAVPALATVRALVGFPVKLGRLLRASRDGYRAYKRQQELVSAGALEPEPQGFPLISLNARPDHRREIRMIVRPRE ELRAAGVSVTVAVMTAIAAALPRYLRDHGQWVPDRLGAEVTVAEPGESAARNNFRNVGVDLCWDEPDLRVRARRIADGIE SRRRRAAHPVLVAQRAGGSALPAPMMWAGVSAFDADLMPPTVAGNTVVSSVVRGAADLVLGGGRVAFTAGFPALSPVMGL THGVHGIGDTVTVSVHTSAAVLPDADHYEALLAGALDEVSRQLR
Sequences:
>Translated_444_residues MTIEQMAPRDAQMYWMSTKIPNDQFLLFCFDSPTADLDTVRSVIAARAARIADLRVRAVDVAGHLDYPYWVPRDESQLPL TVHTLADASWPQCRSAVAALLSSTVDIRESPWHLHLFPGVKGAPQVPGPALVAVLQVSHALADGQRSTAAARALFGDGMP MSGSLPAVPALATVRALVGFPVKLGRLLRASRDGYRAYKRQQELVSAGALEPEPQGFPLISLNARPDHRREIRMIVRPRE ELRAAGVSVTVAVMTAIAAALPRYLRDHGQWVPDRLGAEVTVAEPGESAARNNFRNVGVDLCWDEPDLRVRARRIADGIE SRRRRAAHPVLVAQRAGGSALPAPMMWAGVSAFDADLMPPTVAGNTVVSSVVRGAADLVLGGGRVAFTAGFPALSPVMGL THGVHGIGDTVTVSVHTSAAVLPDADHYEALLAGALDEVSRQLR >Mature_443_residues TIEQMAPRDAQMYWMSTKIPNDQFLLFCFDSPTADLDTVRSVIAARAARIADLRVRAVDVAGHLDYPYWVPRDESQLPLT VHTLADASWPQCRSAVAALLSSTVDIRESPWHLHLFPGVKGAPQVPGPALVAVLQVSHALADGQRSTAAARALFGDGMPM SGSLPAVPALATVRALVGFPVKLGRLLRASRDGYRAYKRQQELVSAGALEPEPQGFPLISLNARPDHRREIRMIVRPREE LRAAGVSVTVAVMTAIAAALPRYLRDHGQWVPDRLGAEVTVAEPGESAARNNFRNVGVDLCWDEPDLRVRARRIADGIES RRRRAAHPVLVAQRAGGSALPAPMMWAGVSAFDADLMPPTVAGNTVVSSVVRGAADLVLGGGRVAFTAGFPALSPVMGLT HGVHGIGDTVTVSVHTSAAVLPDADHYEALLAGALDEVSRQLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47570; Mature: 47439
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIEQMAPRDAQMYWMSTKIPNDQFLLFCFDSPTADLDTVRSVIAARAARIADLRVRAVD CCCHHCCCCCCEEEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHEEEEEE VAGHLDYPYWVPRDESQLPLTVHTLADASWPQCRSAVAALLSSTVDIRESPWHLHLFPGV EECCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCC KGAPQVPGPALVAVLQVSHALADGQRSTAAARALFGDGMPMSGSLPAVPALATVRALVGF CCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCC PVKLGRLLRASRDGYRAYKRQQELVSAGALEPEPQGFPLISLNARPDHRREIRMIVRPRE CHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHEECCHH ELRAAGVSVTVAVMTAIAAALPRYLRDHGQWVPDRLGAEVTVAEPGESAARNNFRNVGVD HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCEEEEECCCCHHHHCCHHHCCCE LCWDEPDLRVRARRIADGIESRRRRAAHPVLVAQRAGGSALPAPMMWAGVSAFDADLMPP EECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHCCCHHCCCCCCC TVAGNTVVSSVVRGAADLVLGGGRVAFTAGFPALSPVMGLTHGVHGIGDTVTVSVHTSAA CCCCHHHHHHHHHCHHHEEECCCEEEEEECCCHHHHHHHHHHCCCCCCCEEEEEEECCEE VLPDADHYEALLAGALDEVSRQLR ECCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TIEQMAPRDAQMYWMSTKIPNDQFLLFCFDSPTADLDTVRSVIAARAARIADLRVRAVD CCHHCCCCCCEEEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHEEEEEE VAGHLDYPYWVPRDESQLPLTVHTLADASWPQCRSAVAALLSSTVDIRESPWHLHLFPGV EECCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCC KGAPQVPGPALVAVLQVSHALADGQRSTAAARALFGDGMPMSGSLPAVPALATVRALVGF CCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCC PVKLGRLLRASRDGYRAYKRQQELVSAGALEPEPQGFPLISLNARPDHRREIRMIVRPRE CHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHEECCHH ELRAAGVSVTVAVMTAIAAALPRYLRDHGQWVPDRLGAEVTVAEPGESAARNNFRNVGVD HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCEEEEECCCCHHHHCCHHHCCCE LCWDEPDLRVRARRIADGIESRRRRAAHPVLVAQRAGGSALPAPMMWAGVSAFDADLMPP EECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHCCCHHCCCCCCC TVAGNTVVSSVVRGAADLVLGGGRVAFTAGFPALSPVMGLTHGVHGIGDTVTVSVHTSAA CCCCHHHHHHHHHCHHHEEECCCEEEEEECCCHHHHHHHHHHCCCCCCCEEEEEEECCEE VLPDADHYEALLAGALDEVSRQLR ECCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA