| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is yeaO [H]
Identifier: 169628358
GI number: 169628358
Start: 1270015
End: 1270362
Strand: Reverse
Name: yeaO [H]
Synonym: MAB_1265c
Alternate gene names: 169628358
Gene position: 1270362-1270015 (Counterclockwise)
Preceding gene: 169628361
Following gene: 169628353
Centisome position: 25.07
GC content: 67.24
Gene sequence:
>348_bases GTGACCTTTTCCACCAAGCGGATCTACGAGTCCCCCGACCCCTCCGACGGCTATCGCGTACTGGTCGACAGACTGTGGCC GCGCGGGGTCAGTAAGGCCGCCGCGCAGGTCGATCTCTGGTTCAAGGACATCGCGCCGAGCCCCGATCTGCGGGTCCGCT GGCACCACGCACCCGACGACGACTGGGGCGCCTACGCCGACGAGTACCGCGCCGAGCTGGCCGGCAACCCGGCGGTGGAC ACCGCACACGAACTCGAACGTGAGCACGGCACCGTCACGTTGCTGTATGCCGCCAAGGACCCGCAGCACAACCACGCGAT CGTGCTGCGGGACTTCCTAGCCGATTGA
Upstream 100 bases:
>100_bases TGAATAGCGTCGACTTCCCGACGTTCGGCAGACCGACGATTCCCAGGTTCAGGCTCACGAGATGGAGAGTCTACGGACCG CGGCGATTAAGAATGGTGCG
Downstream 100 bases:
>100_bases CGTCAGCAGGTGATGTCGACGTTGACGACACGGTGTTGCAACAGAATGCCGCCCCAGGCCACCCCGGGCGTATTGACCAC GGTTCCCGGGTTGAGGAACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MTFSTKRIYESPDPSDGYRVLVDRLWPRGVSKAAAQVDLWFKDIAPSPDLRVRWHHAPDDDWGAYADEYRAELAGNPAVD TAHELEREHGTVTLLYAAKDPQHNHAIVLRDFLAD
Sequences:
>Translated_115_residues MTFSTKRIYESPDPSDGYRVLVDRLWPRGVSKAAAQVDLWFKDIAPSPDLRVRWHHAPDDDWGAYADEYRAELAGNPAVD TAHELEREHGTVTLLYAAKDPQHNHAIVLRDFLAD >Mature_114_residues TFSTKRIYESPDPSDGYRVLVDRLWPRGVSKAAAQVDLWFKDIAPSPDLRVRWHHAPDDDWGAYADEYRAELAGNPAVDT AHELEREHGTVTLLYAAKDPQHNHAIVLRDFLAD
Specific function: Unknown
COG id: COG3189
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv3073c [H]
Homologues:
Organism=Escherichia coli, GI87081976, Length=118, Percent_Identity=42.3728813559322, Blast_Score=90, Evalue=3e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007438 [H]
Pfam domain/function: PF04343 DUF488 [H]
EC number: NA
Molecular weight: Translated: 13097; Mature: 12965
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFSTKRIYESPDPSDGYRVLVDRLWPRGVSKAAAQVDLWFKDIAPSPDLRVRWHHAPDD CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCC DWGAYADEYRAELAGNPAVDTAHELEREHGTVTLLYAAKDPQHNHAIVLRDFLAD CCCCHHHHHHHHHCCCCCCCCHHHHHHCCCCEEEEEEECCCCCCCEEEEEECCCC >Mature Secondary Structure TFSTKRIYESPDPSDGYRVLVDRLWPRGVSKAAAQVDLWFKDIAPSPDLRVRWHHAPDD CCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCC DWGAYADEYRAELAGNPAVDTAHELEREHGTVTLLYAAKDPQHNHAIVLRDFLAD CCCCHHHHHHHHHCCCCCCCCHHHHHHCCCCEEEEEEECCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]