| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628351
Identifier: 169628351
GI number: 169628351
Start: 1265051
End: 1265920
Strand: Reverse
Name: 169628351
Synonym: MAB_1258c
Alternate gene names: NA
Gene position: 1265920-1265051 (Counterclockwise)
Preceding gene: 169628352
Following gene: 169628349
Centisome position: 24.98
GC content: 68.97
Gene sequence:
>870_bases GTGCCATGGTGGGGCGCCATCCTCATCGCGGTTGCCGGAACCCTGTTTGGTTTCGCACTTGACGCGATGATCAATGGCGA GAAGCTGACCGGCGCGTTCGCTGGCTGCTACGCGGCGGGATGTGTCGTGGCGGTTCTCGCGGTCCGCTACGCATCGATCT TCACCGCCGTCGTGCAGCCGCCGCTCATCCTCTTCGCGAGCATCCCGATGGCCTACCTGATCATGTCGCAGGCACCGCTT GCCGGGGGCAAGTCGACAGCGATCACCATCGGGTACCCCCTGATCGAAAGATTCCCGCTGATGATCAGCACCGCGTTGGG TGTATTGATCATCGGAGTGGTGCGCTGGTACTGGGGAATCTTCTCCGGCAGGCCGGCCCGGGACAAAACCGCCAAACCCG CCAAGCCCAAGGCCACCAAGTCGGCCAAGCCGCGAACGACCCGGACCCGGGTGCAGACGCTGGTCGACGCGGAGACCGAC GCCACGGCCAAGACCGGGGGAACTGCCGTGCGCAGCCGCCGTCCCCGCGTCGAGGAGGCCGCCGCACGGACACGCCATGG GCGTCACGAGTCCCCGACACGCCGCCGTCCCACCCGTGATTCCGAGCCCGTGTCGCGGCGGGCCTCGTCGATAGGCACCC CCTGGGAAGACGAGCGCCCGATGCGCACCGAACGCCGCCCGGCACGCCGGCTCCGCGACGAATACGACTATGACGACTAC GGGTACGACGAGCGGCCCCGATACCGGGAGCCGCGGGCAGAGGCCCCACGCGAGCCGCACCGGCCTGCCGTCAGGTACCG GGACGAACGTCCGCCGGTACCGCCGCGGCGCCGCCAGGACCGGTACGACGCCTGGGACTACGACCGCTAG
Upstream 100 bases:
>100_bases CATCCGGCGCGGCACCGGTACCTTTCAACATGTGACAGGTCAACGCGCCCGCTCATCGGTGGAAGCCGATCATCGGTCGG CACACCCCGATATCCCGGGC
Downstream 100 bases:
>100_bases CCAGAGCGCCGCGAGGCCCGCAGTTCACGCGGCAGCGCGAACACCAACGTCTCGTTGGCGGTGGTGACCGGCTGCACCTC GCCGTATCCATGCTCGGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MPWWGAILIAVAGTLFGFALDAMINGEKLTGAFAGCYAAGCVVAVLAVRYASIFTAVVQPPLILFASIPMAYLIMSQAPL AGGKSTAITIGYPLIERFPLMISTALGVLIIGVVRWYWGIFSGRPARDKTAKPAKPKATKSAKPRTTRTRVQTLVDAETD ATAKTGGTAVRSRRPRVEEAAARTRHGRHESPTRRRPTRDSEPVSRRASSIGTPWEDERPMRTERRPARRLRDEYDYDDY GYDERPRYREPRAEAPREPHRPAVRYRDERPPVPPRRRQDRYDAWDYDR
Sequences:
>Translated_289_residues MPWWGAILIAVAGTLFGFALDAMINGEKLTGAFAGCYAAGCVVAVLAVRYASIFTAVVQPPLILFASIPMAYLIMSQAPL AGGKSTAITIGYPLIERFPLMISTALGVLIIGVVRWYWGIFSGRPARDKTAKPAKPKATKSAKPRTTRTRVQTLVDAETD ATAKTGGTAVRSRRPRVEEAAARTRHGRHESPTRRRPTRDSEPVSRRASSIGTPWEDERPMRTERRPARRLRDEYDYDDY GYDERPRYREPRAEAPREPHRPAVRYRDERPPVPPRRRQDRYDAWDYDR >Mature_288_residues PWWGAILIAVAGTLFGFALDAMINGEKLTGAFAGCYAAGCVVAVLAVRYASIFTAVVQPPLILFASIPMAYLIMSQAPLA GGKSTAITIGYPLIERFPLMISTALGVLIIGVVRWYWGIFSGRPARDKTAKPAKPKATKSAKPRTTRTRVQTLVDAETDA TAKTGGTAVRSRRPRVEEAAARTRHGRHESPTRRRPTRDSEPVSRRASSIGTPWEDERPMRTERRPARRLRDEYDYDDYG YDERPRYREPRAEAPREPHRPAVRYRDERPPVPPRRRQDRYDAWDYDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32611; Mature: 32479
Theoretical pI: Translated: 10.79; Mature: 10.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPWWGAILIAVAGTLFGFALDAMINGEKLTGAFAGCYAAGCVVAVLAVRYASIFTAVVQP CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PLILFASIPMAYLIMSQAPLAGGKSTAITIGYPLIERFPLMISTALGVLIIGVVRWYWGI HHHHHHHHHHHHHHHHCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSGRPARDKTAKPAKPKATKSAKPRTTRTRVQTLVDAETDATAKTGGTAVRSRRPRVEEA HCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHCCCHHHHHCCCCHHHH AARTRHGRHESPTRRRPTRDSEPVSRRASSIGTPWEDERPMRTERRPARRLRDEYDYDDY HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC GYDERPRYREPRAEAPREPHRPAVRYRDERPPVPPRRRQDRYDAWDYDR CCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PWWGAILIAVAGTLFGFALDAMINGEKLTGAFAGCYAAGCVVAVLAVRYASIFTAVVQP CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PLILFASIPMAYLIMSQAPLAGGKSTAITIGYPLIERFPLMISTALGVLIIGVVRWYWGI HHHHHHHHHHHHHHHHCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSGRPARDKTAKPAKPKATKSAKPRTTRTRVQTLVDAETDATAKTGGTAVRSRRPRVEEA HCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHCCCHHHHHCCCCHHHH AARTRHGRHESPTRRRPTRDSEPVSRRASSIGTPWEDERPMRTERRPARRLRDEYDYDDY HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC GYDERPRYREPRAEAPREPHRPAVRYRDERPPVPPRRRQDRYDAWDYDR CCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA