| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is asp23 [H]
Identifier: 169628340
GI number: 169628340
Start: 1255749
End: 1256216
Strand: Reverse
Name: asp23 [H]
Synonym: MAB_1247c
Alternate gene names: 169628340
Gene position: 1256216-1255749 (Counterclockwise)
Preceding gene: 169628343
Following gene: 169628339
Centisome position: 24.79
GC content: 64.32
Gene sequence:
>468_bases ATGACCACGGCAACCCAGACCCGCGAACTGAGCTCGTCGAAGCAAGTCGACAAGTCCGGTAATGCCGTCGAGAAGGTCTC CAACCACGGCGTCACCACCATCGCCGACGTGGTGGTCTCCAAGATCGCCGGGATCGCCACACGCGAGGTCGACGGTGTCT ACGACCTGGGCGGCCAGGCCGCCCGCGTCGTGGGCAAGCTGCGTGAGACGCTGCCCGGTTCGCCCAGCCTTACGCAGGGA GTGAGTGTCGAGGTCGGCGAACGTCAGGCAGCCATCGACATCGGGATCGTGGCCGATTACGGGATCGCGATCCACGACCT GGCCGAGGGAATTCGCAGCAACGTTATCTCCGCCGTCGAGAACATGACCGGGCTCGAAGTCACCGAGGTCAACGTCACCG TGCATGACGTGCACTTCGCCGACAGTGATGACGACGCGTCCGACGCCGGAGAGCCACGAGTCCAGTGA
Upstream 100 bases:
>100_bases GTTAGGTCTCGTCGGCGTGCGCAGTTCCCACCGTTGCCCGACGAACTCATTGTGCCGGACAAAAATGTCCGGAAATTGAG ACAAGTCGAAGGAGAAGCTG
Downstream 100 bases:
>100_bases CGGACGCGACCGGCGAGCGGGTCGATCGCGTGGTCGCGGCCGTGACCGCCATCGACGGCGTCATCGGCCTCTATTCCGGG GGCCTCGGAGTCGCCGCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MTTATQTRELSSSKQVDKSGNAVEKVSNHGVTTIADVVVSKIAGIATREVDGVYDLGGQAARVVGKLRETLPGSPSLTQG VSVEVGERQAAIDIGIVADYGIAIHDLAEGIRSNVISAVENMTGLEVTEVNVTVHDVHFADSDDDASDAGEPRVQ
Sequences:
>Translated_155_residues MTTATQTRELSSSKQVDKSGNAVEKVSNHGVTTIADVVVSKIAGIATREVDGVYDLGGQAARVVGKLRETLPGSPSLTQG VSVEVGERQAAIDIGIVADYGIAIHDLAEGIRSNVISAVENMTGLEVTEVNVTVHDVHFADSDDDASDAGEPRVQ >Mature_154_residues TTATQTRELSSSKQVDKSGNAVEKVSNHGVTTIADVVVSKIAGIATREVDGVYDLGGQAARVVGKLRETLPGSPSLTQGV SVEVGERQAAIDIGIVADYGIAIHDLAEGIRSNVISAVENMTGLEVTEVNVTVHDVHFADSDDDASDAGEPRVQ
Specific function: May play a key role in alkaline pH tolerance [H]
COG id: COG1302
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the asp23 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005531 [H]
Pfam domain/function: PF03780 DUF322 [H]
EC number: NA
Molecular weight: Translated: 16126; Mature: 15995
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTATQTRELSSSKQVDKSGNAVEKVSNHGVTTIADVVVSKIAGIATREVDGVYDLGGQA CCCCCCHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCCHH ARVVGKLRETLPGSPSLTQGVSVEVGERQAAIDIGIVADYGIAIHDLAEGIRSNVISAVE HHHHHHHHHHCCCCCCCCCCCEEEECCCEEEEEEEEHHCCCCHHHHHHHHHHHHHHHHHH NMTGLEVTEVNVTVHDVHFADSDDDASDAGEPRVQ HCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure TTATQTRELSSSKQVDKSGNAVEKVSNHGVTTIADVVVSKIAGIATREVDGVYDLGGQA CCCCCHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCCHH ARVVGKLRETLPGSPSLTQGVSVEVGERQAAIDIGIVADYGIAIHDLAEGIRSNVISAVE HHHHHHHHHHCCCCCCCCCCCEEEECCCEEEEEEEEHHCCCCHHHHHHHHHHHHHHHHHH NMTGLEVTEVNVTVHDVHFADSDDDASDAGEPRVQ HCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA