| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628328
Identifier: 169628328
GI number: 169628328
Start: 1246914
End: 1248122
Strand: Direct
Name: 169628328
Synonym: MAB_1235
Alternate gene names: NA
Gene position: 1246914-1248122 (Clockwise)
Preceding gene: 169628324
Following gene: 169628329
Centisome position: 24.61
GC content: 63.85
Gene sequence:
>1209_bases ATGGGCGATAACGACGAGTCGAAGAACAGTGTCGTCACCGAATACCTGCTGCTCGGGCTGCGATTTGACCGTATTGAGAG CGGGTACGTCGACTCCTTCACCGGTGATCCCGCACTGCGGCAGCGTGTCGAGAATGAACCCACGCCCAACCCGGCCGACC TCGCCCGTCAGGCCACCACGCTGCGCGCGGAGCTGGCCGCCAGTGACCTCGACGGGGCGCGCAAGGCGTTCATCGACACT CATTTGAAGGCGCTGGCGTGTGCCGGGCGCAAGTTCGCCGGCGAAGACATCGGATTTGTCGACGAGGTGCATGACTACTT CGACGTGCGCATCGCCAAGGGAGATGAAGAGCGCTACCGGCAAGCCCATGAGGCGCTCGAAAACGTTCTACCCGAAGGCG GTTCACTCTTGGAACGCAAGACCGCCTATGACCGGTCGCAGGAGATCGACCCGAGTCGGCTGCGGGAATGTGTGGACGCC TTCTCCAGCGCGCTGCGCGACCGGGTGCGCGCGGACTTTCCGCTGCCTGACACCGAGACGGTGAAGTACGAGGTGGTCAG CGATAAGCCGTGGTCGGGATTCAACTACTACGAGGGCAATTATCGCTCCACGGTCGCGGTCAACTCCGACCTCAAGCAGT ACCTGAATAACGTGCCCGCCCTGATCGCGCACGAGTCGTATCCGGGGCATCACACCGAGCACTGCCGCAAGGAGGCAGGG CTGGTGCGAATCGGAGAACAAGCGGAGCAAACGATATTCCTGGTCAACACGCCGCAGTGCCTGATGGCCGAAGGCCTCGC CGACCTGGCGCTCTATGCCGCCGTGGGCGAGGACTGGGGCTTATGGGCGCAGGAGATCTATGCCGACCTGGGGCTGCGTT TCGACGGCGAACAGGCTCAGGCCATCGGGCGGGCTCGGGCCGGCCTGATCAACGTCCGCCAGGATGCCGCCCTGATGCTG CATGACGAGCACCGCGACGTCGAGGACGTCATCGCCTTTCTCAAACGCTGGCTGCTGGTCTCGGATGAGCGGGCCCGGCA CATGCTCAAATTCCTGTCGTCGCCGCTGTGGCGCGCATACATCTCCACGTACGTCGAGGGCTATCAATTGTTGAAGGGCT GGCTGGATCGGCGCCCGGCGGAGCAGTCGCTGACGGCCCGCTTCGGCAGGCTGCTCGATGAGCCCCTGGTGGCGTCCACG TTGGTGTAG
Upstream 100 bases:
>100_bases TTCCGGTCGAACTCCACGTAGGGGCTCGGCTCGCTCAGCCGCGGCATGAACGCAAGTCTTGCAGGAGCCATTCGTGAACG CGGCACTAGGGTTGTGTGAC
Downstream 100 bases:
>100_bases CCGCCGACTAGGCTGATGGCCATGACGACTTCAGCCTCCAGCGATATCGCGCAGGGTGCGCAGTATGCCGAGACCGCCAG CGCCGCCTACCGGTCGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 402; Mature: 401
Protein sequence:
>402_residues MGDNDESKNSVVTEYLLLGLRFDRIESGYVDSFTGDPALRQRVENEPTPNPADLARQATTLRAELAASDLDGARKAFIDT HLKALACAGRKFAGEDIGFVDEVHDYFDVRIAKGDEERYRQAHEALENVLPEGGSLLERKTAYDRSQEIDPSRLRECVDA FSSALRDRVRADFPLPDTETVKYEVVSDKPWSGFNYYEGNYRSTVAVNSDLKQYLNNVPALIAHESYPGHHTEHCRKEAG LVRIGEQAEQTIFLVNTPQCLMAEGLADLALYAAVGEDWGLWAQEIYADLGLRFDGEQAQAIGRARAGLINVRQDAALML HDEHRDVEDVIAFLKRWLLVSDERARHMLKFLSSPLWRAYISTYVEGYQLLKGWLDRRPAEQSLTARFGRLLDEPLVAST LV
Sequences:
>Translated_402_residues MGDNDESKNSVVTEYLLLGLRFDRIESGYVDSFTGDPALRQRVENEPTPNPADLARQATTLRAELAASDLDGARKAFIDT HLKALACAGRKFAGEDIGFVDEVHDYFDVRIAKGDEERYRQAHEALENVLPEGGSLLERKTAYDRSQEIDPSRLRECVDA FSSALRDRVRADFPLPDTETVKYEVVSDKPWSGFNYYEGNYRSTVAVNSDLKQYLNNVPALIAHESYPGHHTEHCRKEAG LVRIGEQAEQTIFLVNTPQCLMAEGLADLALYAAVGEDWGLWAQEIYADLGLRFDGEQAQAIGRARAGLINVRQDAALML HDEHRDVEDVIAFLKRWLLVSDERARHMLKFLSSPLWRAYISTYVEGYQLLKGWLDRRPAEQSLTARFGRLLDEPLVAST LV >Mature_401_residues GDNDESKNSVVTEYLLLGLRFDRIESGYVDSFTGDPALRQRVENEPTPNPADLARQATTLRAELAASDLDGARKAFIDTH LKALACAGRKFAGEDIGFVDEVHDYFDVRIAKGDEERYRQAHEALENVLPEGGSLLERKTAYDRSQEIDPSRLRECVDAF SSALRDRVRADFPLPDTETVKYEVVSDKPWSGFNYYEGNYRSTVAVNSDLKQYLNNVPALIAHESYPGHHTEHCRKEAGL VRIGEQAEQTIFLVNTPQCLMAEGLADLALYAAVGEDWGLWAQEIYADLGLRFDGEQAQAIGRARAGLINVRQDAALMLH DEHRDVEDVIAFLKRWLLVSDERARHMLKFLSSPLWRAYISTYVEGYQLLKGWLDRRPAEQSLTARFGRLLDEPLVASTL V
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45324; Mature: 45193
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDNDESKNSVVTEYLLLGLRFDRIESGYVDSFTGDPALRQRVENEPTPNPADLARQATT CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHH LRAELAASDLDGARKAFIDTHLKALACAGRKFAGEDIGFVDEVHDYFDVRIAKGDEERYR HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHEEEECCCHHHHH QAHEALENVLPEGGSLLERKTAYDRSQEIDPSRLRECVDAFSSALRDRVRADFPLPDTET HHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC VKYEVVSDKPWSGFNYYEGNYRSTVAVNSDLKQYLNNVPALIAHESYPGHHTEHCRKEAG EEEEEECCCCCCCCCCCCCCCCEEEEECHHHHHHHHCCCEEEEECCCCCCCHHHHHHHCC LVRIGEQAEQTIFLVNTPQCLMAEGLADLALYAAVGEDWGLWAQEIYADLGLRFDGEQAQ CEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHH AIGRARAGLINVRQDAALMLHDEHRDVEDVIAFLKRWLLVSDERARHMLKFLSSPLWRAY HHHHHHHHHEECCCCCEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHH ISTYVEGYQLLKGWLDRRPAEQSLTARFGRLLDEPLVASTLV HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHCC >Mature Secondary Structure GDNDESKNSVVTEYLLLGLRFDRIESGYVDSFTGDPALRQRVENEPTPNPADLARQATT CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHH LRAELAASDLDGARKAFIDTHLKALACAGRKFAGEDIGFVDEVHDYFDVRIAKGDEERYR HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHEEEECCCHHHHH QAHEALENVLPEGGSLLERKTAYDRSQEIDPSRLRECVDAFSSALRDRVRADFPLPDTET HHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC VKYEVVSDKPWSGFNYYEGNYRSTVAVNSDLKQYLNNVPALIAHESYPGHHTEHCRKEAG EEEEEECCCCCCCCCCCCCCCCEEEEECHHHHHHHHCCCEEEEECCCCCCCHHHHHHHCC LVRIGEQAEQTIFLVNTPQCLMAEGLADLALYAAVGEDWGLWAQEIYADLGLRFDGEQAQ CEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHH AIGRARAGLINVRQDAALMLHDEHRDVEDVIAFLKRWLLVSDERARHMLKFLSSPLWRAY HHHHHHHHHEECCCCCEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHH ISTYVEGYQLLKGWLDRRPAEQSLTARFGRLLDEPLVASTLV HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA