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The map label for this gene is 169628325

Identifier: 169628325

GI number: 169628325

Start: 1243767

End: 1245449

Strand: Reverse

Name: 169628325

Synonym: MAB_1232c

Alternate gene names: NA

Gene position: 1245449-1243767 (Counterclockwise)

Preceding gene: 169628326

Following gene: 169628323

Centisome position: 24.58

GC content: 62.75

Gene sequence:

>1683_bases
ATGGACTATGACTACGACGTAGTCGTCATCGGGTCCGGTTTCGGTGGGAGCGTTGCGGCCCTCCGCCTCACCGAAAAGGG
CTACCGAGTCGGCGTATTGGACATGGGAAAACGTTGGAAACGCGAAGATTTCCCACCGAATAACTGGCACGTGCGCAAGG
CGATGTGGGCACCGGCGCTGGGCTGTTACGGCCCCCAACGTCTCACGGTTCTCGGCAAGACCTTCATCGCCAGCGCGGTG
GGTGTGGGTGGTGGCTCGCTGATCTACGGCAACACCCTCTACGAGCCGTTGGAGCAGTTTTACGTCGACAAGCAGTGGGC
GCATATCAGCGACTGGAAGTCCGAGCTGGCCCCGTATTACGACCAGGCCAGCCGCATGCTGGGCGTCGCACAGACTCCGC
ACACCACCCCGCCCGATGAGGTGCTGTTGGCGGTGGCCAAGGATCTGGGCGTCGAGGACACCTATCACCCCACCAACGTG
GGCGTCTTCTTCGGCGACGAGCCCGGCAAGACGGTGCCCGACCCGTTCTTCGGCGGCGCCGGACCCGAGCGCACGGGTTG
TATCGGATGCGCGGCCTGTATGACCGGCTGCAAACACAACGCCAAGAACACCACCGAGACCAACTATCTCTATCTGGCCG
AACACGCTGGCGCACAGATCCATCCGTTGACCCAGGTTCTCGACGTCCGCCCGCTGGAAGACGGTGAGGGATACGCGGTC
AGTACCAAGCAAACCGGGCGACTGTTACGCAAGAAGAAGCGCACGTTCACCGCGCAGCATGTGGTGTTCTCGGCGGCGTC
GCTGGGCACCCAGCGACTGCTGCACAAATTCAAGGATTCGGGGTCGCTGCCCAATCTGTCGGAACGTCTGGGCGAACAGA
CGCGCACCAACTCTGAATCAGTGCCTATCGTCTACTCCCCCACCCGTGACGACTTCTCGCAGGGAGTCGCCATCACATCG
TCAATTCACCCCGAACCCAACACCCACGTCGAAGTGGTTCGGTACGGGGAGGGATCGACCTTCCTGAGCATGTTGGGTAC
CAATATGGTCGACGGCGGCCCGTGGCGTTTCGCGCGAACCTGGCTGGCGAACCTGCGGCACCCCGCGATGATGTTGCGGT
CGATGTTCCCCTACCGTGCCGCGCAGCACTCCATCATCGTGTTGGTGATGCAGTCGCTGGACAACTCGCTGACCACCTAC
CTCAAACGCGGAATGTTCGGCAAGAAGATGACCGCGAAACAGGGTTCCGGAGAACCGAATCCGGACTGGATCCCGGTGGC
CCACGATGTCGCACGCCGCATGGCCGACAAGGTCGACGGATACGCGGGCAGTACGCATCTGGATTCGATGAACATCCCGC
TGACGGCGCACTTCATCGGTGGCTGTCCCATCGGCGATTCGCCCGAGACGGGAGTGATCGATCCGTACCAACGAATCTAC
GGCCATCCCGGTCTACATATCTGCGATGGATCGGCGATCTCGGCGAACCTGGGAGTGAACCCGTCGTTCACCATCACCGC
ACAGGCCGAGCGCGCCATGGCGTTCTGGCCCAACAAGGGCGAGGCCGATCCACGCCCGGCGCTGGGCTCGGCATACCGGC
GCGTCGCGCCAGTGCAGCCGAATCACCCGACGGTTCCCGAGTCCGCACCCGGTGCGCTGCGCTTGCCGTTGACACCGGTC
TGA

Upstream 100 bases:

>100_bases
GGCCATCAACGCGATCCACGAGAAGATGCGCGCCGCACTCGCTCAGGCACAAGGCTGATTTTCACCCCGCAGCGCACGAC
CAACCAGTAGGTTGGCCGCC

Downstream 100 bases:

>100_bases
ACATGAAGGTGCCGGGCCACCAAGCGGATGGCCCGGCACCGGCTCACTCTCAGCAGGTGAGCCATGTGAGCGGCTACGCG
GAGCGCAGCCGCCGTAGTCC

Product: cholesterol oxidase ChoD

Products: NA

Alternate protein names: Glucose-Methanol-Choline Oxidoreductase; FAD Dependent Oxidoreductase; GMC Oxidoreductase; Oxidoreductase; Choline Dehydrogenase-Like Flavoprotein; Choline Dehydrogenase; Oxidase; Cholesterol Oxidase ChoD; Cholesterol-O2 Oxidoreductase; Fad-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Oxidoreductase Glucose-Methanol-Choline Family; GMC Oxidoreductase Family Protein; Cholesterol Oxidase Chod; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Gmc Oxidoreductase Family Protein; GMC Oxidoreductase Family; Ferredoxin Domain Gmc Oxidoreductase; Cholesterol Oxidase ChoD; GMC Family Oxidoreductase

Number of amino acids: Translated: 560; Mature: 560

Protein sequence:

>560_residues
MDYDYDVVVIGSGFGGSVAALRLTEKGYRVGVLDMGKRWKREDFPPNNWHVRKAMWAPALGCYGPQRLTVLGKTFIASAV
GVGGGSLIYGNTLYEPLEQFYVDKQWAHISDWKSELAPYYDQASRMLGVAQTPHTTPPDEVLLAVAKDLGVEDTYHPTNV
GVFFGDEPGKTVPDPFFGGAGPERTGCIGCAACMTGCKHNAKNTTETNYLYLAEHAGAQIHPLTQVLDVRPLEDGEGYAV
STKQTGRLLRKKKRTFTAQHVVFSAASLGTQRLLHKFKDSGSLPNLSERLGEQTRTNSESVPIVYSPTRDDFSQGVAITS
SIHPEPNTHVEVVRYGEGSTFLSMLGTNMVDGGPWRFARTWLANLRHPAMMLRSMFPYRAAQHSIIVLVMQSLDNSLTTY
LKRGMFGKKMTAKQGSGEPNPDWIPVAHDVARRMADKVDGYAGSTHLDSMNIPLTAHFIGGCPIGDSPETGVIDPYQRIY
GHPGLHICDGSAISANLGVNPSFTITAQAERAMAFWPNKGEADPRPALGSAYRRVAPVQPNHPTVPESAPGALRLPLTPV

Sequences:

>Translated_560_residues
MDYDYDVVVIGSGFGGSVAALRLTEKGYRVGVLDMGKRWKREDFPPNNWHVRKAMWAPALGCYGPQRLTVLGKTFIASAV
GVGGGSLIYGNTLYEPLEQFYVDKQWAHISDWKSELAPYYDQASRMLGVAQTPHTTPPDEVLLAVAKDLGVEDTYHPTNV
GVFFGDEPGKTVPDPFFGGAGPERTGCIGCAACMTGCKHNAKNTTETNYLYLAEHAGAQIHPLTQVLDVRPLEDGEGYAV
STKQTGRLLRKKKRTFTAQHVVFSAASLGTQRLLHKFKDSGSLPNLSERLGEQTRTNSESVPIVYSPTRDDFSQGVAITS
SIHPEPNTHVEVVRYGEGSTFLSMLGTNMVDGGPWRFARTWLANLRHPAMMLRSMFPYRAAQHSIIVLVMQSLDNSLTTY
LKRGMFGKKMTAKQGSGEPNPDWIPVAHDVARRMADKVDGYAGSTHLDSMNIPLTAHFIGGCPIGDSPETGVIDPYQRIY
GHPGLHICDGSAISANLGVNPSFTITAQAERAMAFWPNKGEADPRPALGSAYRRVAPVQPNHPTVPESAPGALRLPLTPV
>Mature_560_residues
MDYDYDVVVIGSGFGGSVAALRLTEKGYRVGVLDMGKRWKREDFPPNNWHVRKAMWAPALGCYGPQRLTVLGKTFIASAV
GVGGGSLIYGNTLYEPLEQFYVDKQWAHISDWKSELAPYYDQASRMLGVAQTPHTTPPDEVLLAVAKDLGVEDTYHPTNV
GVFFGDEPGKTVPDPFFGGAGPERTGCIGCAACMTGCKHNAKNTTETNYLYLAEHAGAQIHPLTQVLDVRPLEDGEGYAV
STKQTGRLLRKKKRTFTAQHVVFSAASLGTQRLLHKFKDSGSLPNLSERLGEQTRTNSESVPIVYSPTRDDFSQGVAITS
SIHPEPNTHVEVVRYGEGSTFLSMLGTNMVDGGPWRFARTWLANLRHPAMMLRSMFPYRAAQHSIIVLVMQSLDNSLTTY
LKRGMFGKKMTAKQGSGEPNPDWIPVAHDVARRMADKVDGYAGSTHLDSMNIPLTAHFIGGCPIGDSPETGVIDPYQRIY
GHPGLHICDGSAISANLGVNPSFTITAQAERAMAFWPNKGEADPRPALGSAYRRVAPVQPNHPTVPESAPGALRLPLTPV

Specific function: Unknown

COG id: COG2303

COG function: function code E; Choline dehydrogenase and related flavoproteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61038; Mature: 61038

Theoretical pI: Translated: 7.90; Mature: 7.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYDYDVVVIGSGFGGSVAALRLTEKGYRVGVLDMGKRWKREDFPPNNWHVRKAMWAPAL
CCCCEEEEEEECCCCCCEEEEEEECCCCEEEEEHHCCHHCCCCCCCCCCEEEHHHHCCCC
GCYGPQRLTVLGKTFIASAVGVGGGSLIYGNTLYEPLEQFYVDKQWAHISDWKSELAPYY
CCCCCCHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHCCCCCCHHHHHHHHHCHHH
DQASRMLGVAQTPHTTPPDEVLLAVAKDLGVEDTYHPTNVGVFFGDEPGKTVPDPFFGGA
HHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCC
GPERTGCIGCAACMTGCKHNAKNTTETNYLYLAEHAGAQIHPLTQVLDVRPLEDGEGYAV
CCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEHHHHHHHCCCCCCCCCEEE
STKQTGRLLRKKKRTFTAQHVVFSAASLGTQRLLHKFKDSGSLPNLSERLGEQTRTNSES
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCC
VPIVYSPTRDDFSQGVAITSSIHPEPNTHVEVVRYGEGSTFLSMLGTNMVDGGPWRFART
CCEEECCCHHHHHCCEEEEECCCCCCCCCEEEEEECCCCHHHHHHCCCCCCCCCHHHHHH
WLANLRHPAMMLRSMFPYRAAQHSIIVLVMQSLDNSLTTYLKRGMFGKKMTAKQGSGEPN
HHHHCCCHHHHHHHHCCHHHHCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDWIPVAHDVARRMADKVDGYAGSTHLDSMNIPLTAHFIGGCPIGDSPETGVIDPYQRIY
CCEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHH
GHPGLHICDGSAISANLGVNPSFTITAQAERAMAFWPNKGEADPRPALGSAYRRVAPVQP
CCCCCEEECCCEEEEECCCCCCEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCC
NHPTVPESAPGALRLPLTPV
CCCCCCCCCCCEEECCCCCC
>Mature Secondary Structure
MDYDYDVVVIGSGFGGSVAALRLTEKGYRVGVLDMGKRWKREDFPPNNWHVRKAMWAPAL
CCCCEEEEEEECCCCCCEEEEEEECCCCEEEEEHHCCHHCCCCCCCCCCEEEHHHHCCCC
GCYGPQRLTVLGKTFIASAVGVGGGSLIYGNTLYEPLEQFYVDKQWAHISDWKSELAPYY
CCCCCCHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHCCCCCCHHHHHHHHHCHHH
DQASRMLGVAQTPHTTPPDEVLLAVAKDLGVEDTYHPTNVGVFFGDEPGKTVPDPFFGGA
HHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCC
GPERTGCIGCAACMTGCKHNAKNTTETNYLYLAEHAGAQIHPLTQVLDVRPLEDGEGYAV
CCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEHHHHHHHCCCCCCCCCEEE
STKQTGRLLRKKKRTFTAQHVVFSAASLGTQRLLHKFKDSGSLPNLSERLGEQTRTNSES
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCC
VPIVYSPTRDDFSQGVAITSSIHPEPNTHVEVVRYGEGSTFLSMLGTNMVDGGPWRFART
CCEEECCCHHHHHCCEEEEECCCCCCCCCEEEEEECCCCHHHHHHCCCCCCCCCHHHHHH
WLANLRHPAMMLRSMFPYRAAQHSIIVLVMQSLDNSLTTYLKRGMFGKKMTAKQGSGEPN
HHHHCCCHHHHHHHHCCHHHHCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDWIPVAHDVARRMADKVDGYAGSTHLDSMNIPLTAHFIGGCPIGDSPETGVIDPYQRIY
CCEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHH
GHPGLHICDGSAISANLGVNPSFTITAQAERAMAFWPNKGEADPRPALGSAYRRVAPVQP
CCCCCEEECCCEEEEECCCCCCEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCC
NHPTVPESAPGALRLPLTPV
CCCCCCCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA