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The map label for this gene is 169628310

Identifier: 169628310

GI number: 169628310

Start: 1229432

End: 1230019

Strand: Reverse

Name: 169628310

Synonym: MAB_1217c

Alternate gene names: NA

Gene position: 1230019-1229432 (Counterclockwise)

Preceding gene: 169628323

Following gene: 169628309

Centisome position: 24.27

GC content: 62.76

Gene sequence:

>588_bases
GTGTCCAGTGAAGTTGTGGTGCCCCTCACAGAAGAAACGCCACGGAACCGGCGGCAAGAAGAGACGATCCGCAAGATCGT
CACCGCGGGCCGCGAGATGCTCGGCGAGACCACCTATGCGGACATGACCATCCGTGGCGTCGCCGCCCGCGCCAAGGTCG
CCCCCGCCACGGCATACACGTATTTCTCTTCAAAGAGCCATCTCGTCGCCGAGATCTACCTCGACCTCATTCATGAGGCG
CCCTACTTCACCGACGTCAACGACACCCAGGCCGCACGAGTGACCAAAACACTGCGGAGCCTGGCGCTGGTGGTGGCCGA
TGAACCCGAGATCGCGACCGGCTGCACCACCGCCCTGCTGAGCAACAACGACGAGGCCGTGCGTGCCGTCCGGGACAAGA
TCGGGCTGGAAATCCATCGCAGGATCCGCTCTGCCATGGGACCGGACGCAGACCCTCGTGTGGTGTCGGCCCTGGAGATG
ACGTTCTTCGGCGCCCTCATGCACGCGGGAAGCGGCACCTTCACGTATCACCAGATCGCGGACAAGCTGACCTTCGTCGT
GGATCTCATGTTGGGGAAGAAGGAATGA

Upstream 100 bases:

>100_bases
ATGGCAAGGCCGCCATCAGAACGGGACAAATAATTGGTGTTGGACAGCATTTTTCAAACTCAACCTTGCCGGCCCATGCG
CTCCGCGCTAATCTGGACAC

Downstream 100 bases:

>100_bases
CAGTAGCCGAAACGTCAGCAGTACCACTGGTTTTCGACCCGTACGACTACGACTTCCACGAAGACCCGTACCCGTACTAC
CGGCGATTGCGCGACGAGGC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MSSEVVVPLTEETPRNRRQEETIRKIVTAGREMLGETTYADMTIRGVAARAKVAPATAYTYFSSKSHLVAEIYLDLIHEA
PYFTDVNDTQAARVTKTLRSLALVVADEPEIATGCTTALLSNNDEAVRAVRDKIGLEIHRRIRSAMGPDADPRVVSALEM
TFFGALMHAGSGTFTYHQIADKLTFVVDLMLGKKE

Sequences:

>Translated_195_residues
MSSEVVVPLTEETPRNRRQEETIRKIVTAGREMLGETTYADMTIRGVAARAKVAPATAYTYFSSKSHLVAEIYLDLIHEA
PYFTDVNDTQAARVTKTLRSLALVVADEPEIATGCTTALLSNNDEAVRAVRDKIGLEIHRRIRSAMGPDADPRVVSALEM
TFFGALMHAGSGTFTYHQIADKLTFVVDLMLGKKE
>Mature_194_residues
SSEVVVPLTEETPRNRRQEETIRKIVTAGREMLGETTYADMTIRGVAARAKVAPATAYTYFSSKSHLVAEIYLDLIHEAP
YFTDVNDTQAARVTKTLRSLALVVADEPEIATGCTTALLSNNDEAVRAVRDKIGLEIHRRIRSAMGPDADPRVVSALEMT
FFGALMHAGSGTFTYHQIADKLTFVVDLMLGKKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 21476; Mature: 21345

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSEVVVPLTEETPRNRRQEETIRKIVTAGREMLGETTYADMTIRGVAARAKVAPATAYT
CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHCEEEHHHHHHHHCCCHHHHE
YFSSKSHLVAEIYLDLIHEAPYFTDVNDTQAARVTKTLRSLALVVADEPEIATGCTTALL
EECCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
SNNDEAVRAVRDKIGLEIHRRIRSAMGPDADPRVVSALEMTFFGALMHAGSGTFTYHQIA
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
DKLTFVVDLMLGKKE
HHHHHHHHHHHCCCC
>Mature Secondary Structure 
SSEVVVPLTEETPRNRRQEETIRKIVTAGREMLGETTYADMTIRGVAARAKVAPATAYT
CCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHCEEEHHHHHHHHCCCHHHHE
YFSSKSHLVAEIYLDLIHEAPYFTDVNDTQAARVTKTLRSLALVVADEPEIATGCTTALL
EECCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
SNNDEAVRAVRDKIGLEIHRRIRSAMGPDADPRVVSALEMTFFGALMHAGSGTFTYHQIA
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
DKLTFVVDLMLGKKE
HHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]