| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628283
Identifier: 169628283
GI number: 169628283
Start: 1203900
End: 1204745
Strand: Direct
Name: 169628283
Synonym: MAB_1190
Alternate gene names: NA
Gene position: 1203900-1204745 (Clockwise)
Preceding gene: 169628276
Following gene: 169628287
Centisome position: 23.76
GC content: 66.9
Gene sequence:
>846_bases GTGCGAACCACCAGCAATCCCATTCTTCGGACGCTGCCCGGTAAAGAGGGCGGCGGCTATGCGCAGTTCGGAGCGGGTGC GGCAGGCGCTGGTGCCATGGCGGCCCAGCAGATGCGCCAGGACCCCTACACCGCGTACCCGGAGGCCCAGGCGGGCGTAT CCCGGCCGCTGACCATCGACGATGTGGTGACCAAGACCGGCATCACCCTCGGTGTGATCGTCGCCGTCGCCGTTGCCTCC TTCTTCCTCGTCAGCACCAACCCGGGGCTGGCGCTGCCGTTCCTGCTGGTGGGTGGCTTCGGCGGTCTGATCATGGTGGC GATCGCGAGCTTCGGGCGTAAGCAGGACAACCCGGCCATCGTGCTGAGCTATGCCGCGCTGGAAGGTCTGTTCGTCGGCG CGATCTCCTTCGCCCTGACCTTCCAGGTGGCGGGGGCCAACGCCGGCGCCCTGATCGGCCAGGCGATCCTCGGCACCGTG GGCGTGTTCATCGGCATGCTGTTCGTGTACCGCTCGGGTGCCATCCGCGTCACCCCCAAGTTCCAGCGGATGCTGCTGGC CGGTCTGGTCGGCGTGCTGGTGCTGGCGCTGGGCAATATGGTGCTCGGATTCTTCGGCATCGACATGGGGCTGCGCAGCG GTGGCCCGATCGCGATCATCTTCTCGCTCGTTTGCATCGGTCTGGCCGCGTTCAGCTTCCTGATCGACTTCGACGCCGCA GACCAGATGGTGCGCGCCGGTGCCCCGGAGAAGGCGGCCTGGGGCATCGCCCTCGGCCTGGCCGTCACCCTGGTCTGGCT CTACGTCGAAATCCTGCGACTGCTGAGCTACTTCCAGAACGACTAG
Upstream 100 bases:
>100_bases CTTGCACTTGCCTGCTCGTTAAAGGTCCAGTTGACTTGTTAGACGTCATCCGCGGAGGTCGCATATCGCGCCGCCGCACA TCCAGGAGAGGATCACGACG
Downstream 100 bases:
>100_bases CACTAAGCAACGAAAAGGGGCGCTCCGGAAGGGGCGCCCCTTTTTAATGCGAATGTTCAGCCGGAAACGCGGACCCGGCC CGCGGCCTCGGCGGCGTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Permease Of Facilitator Superfamily Protein; Membrane Spanning Protein
Number of amino acids: Translated: 281; Mature: 281
Protein sequence:
>281_residues MRTTSNPILRTLPGKEGGGYAQFGAGAAGAGAMAAQQMRQDPYTAYPEAQAGVSRPLTIDDVVTKTGITLGVIVAVAVAS FFLVSTNPGLALPFLLVGGFGGLIMVAIASFGRKQDNPAIVLSYAALEGLFVGAISFALTFQVAGANAGALIGQAILGTV GVFIGMLFVYRSGAIRVTPKFQRMLLAGLVGVLVLALGNMVLGFFGIDMGLRSGGPIAIIFSLVCIGLAAFSFLIDFDAA DQMVRAGAPEKAAWGIALGLAVTLVWLYVEILRLLSYFQND
Sequences:
>Translated_281_residues MRTTSNPILRTLPGKEGGGYAQFGAGAAGAGAMAAQQMRQDPYTAYPEAQAGVSRPLTIDDVVTKTGITLGVIVAVAVAS FFLVSTNPGLALPFLLVGGFGGLIMVAIASFGRKQDNPAIVLSYAALEGLFVGAISFALTFQVAGANAGALIGQAILGTV GVFIGMLFVYRSGAIRVTPKFQRMLLAGLVGVLVLALGNMVLGFFGIDMGLRSGGPIAIIFSLVCIGLAAFSFLIDFDAA DQMVRAGAPEKAAWGIALGLAVTLVWLYVEILRLLSYFQND >Mature_281_residues MRTTSNPILRTLPGKEGGGYAQFGAGAAGAGAMAAQQMRQDPYTAYPEAQAGVSRPLTIDDVVTKTGITLGVIVAVAVAS FFLVSTNPGLALPFLLVGGFGGLIMVAIASFGRKQDNPAIVLSYAALEGLFVGAISFALTFQVAGANAGALIGQAILGTV GVFIGMLFVYRSGAIRVTPKFQRMLLAGLVGVLVLALGNMVLGFFGIDMGLRSGGPIAIIFSLVCIGLAAFSFLIDFDAA DQMVRAGAPEKAAWGIALGLAVTLVWLYVEILRLLSYFQND
Specific function: Unknown
COG id: COG4760
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29059; Mature: 29059
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTTSNPILRTLPGKEGGGYAQFGAGAAGAGAMAAQQMRQDPYTAYPEAQAGVSRPLTID CCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHCCCCCCCCHH DVVTKTGITLGVIVAVAVASFFLVSTNPGLALPFLLVGGFGGLIMVAIASFGRKQDNPAI HHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHCCCCCCCEE VLSYAALEGLFVGAISFALTFQVAGANAGALIGQAILGTVGVFIGMLFVYRSGAIRVTPK EEEHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECHH FQRMLLAGLVGVLVLALGNMVLGFFGIDMGLRSGGPIAIIFSLVCIGLAAFSFLIDFDAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHH DQMVRAGAPEKAAWGIALGLAVTLVWLYVEILRLLSYFQND HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRTTSNPILRTLPGKEGGGYAQFGAGAAGAGAMAAQQMRQDPYTAYPEAQAGVSRPLTID CCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHCCCCCCCCHH DVVTKTGITLGVIVAVAVASFFLVSTNPGLALPFLLVGGFGGLIMVAIASFGRKQDNPAI HHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHCCCCCCCEE VLSYAALEGLFVGAISFALTFQVAGANAGALIGQAILGTVGVFIGMLFVYRSGAIRVTPK EEEHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECHH FQRMLLAGLVGVLVLALGNMVLGFFGIDMGLRSGGPIAIIFSLVCIGLAAFSFLIDFDAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHH DQMVRAGAPEKAAWGIALGLAVTLVWLYVEILRLLSYFQND HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA