Definition Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence.
Accession NC_010397
Length 5,067,172

Click here to switch to the map view.

The map label for this gene is 169628260

Identifier: 169628260

GI number: 169628260

Start: 1183552

End: 1184034

Strand: Direct

Name: 169628260

Synonym: MAB_1167

Alternate gene names: NA

Gene position: 1183552-1184034 (Clockwise)

Preceding gene: 169628259

Following gene: 169628261

Centisome position: 23.36

GC content: 67.91

Gene sequence:

>483_bases
GTGATCTCAGACGACGATATCGCGGCGGTCACAGCGCAATTGGGCCGCGCGCCGCGAGGAATGCTGGAGGTCTCGTACCG
TTGTCCCAACGGTGAGCCCGCCGTCGTGAAGACGGCACCGCGGCTACCCGACGGCACGCCGTTCCCCACGCTCTATTACC
TGACGCATCCAGCGCTCACGGCTGCGGCCAGCCGGCTGGAGTCGGGCGGCCTGATGCGTGAAATGACCGAACGCCTTGCC
GTGGACGAGGAATTGGCGGCCGCCTATCGGCGGGCGCACGAGAGCTACCTCGCCGAGCGTGATGCCATCGAACCGCTCGG
AACCACCGTCACCGCAGGTGGCATGCCCGACAGGGTCAAGTGCCTGCACGTGTTGATCGGGCACTCGCTGGCCGTGGGCC
CGGGGGTGAACCCGTTGGGCGACGAGGCGATTCGTGAGCTGGCGGGCACCATGCCCGGTGTGCTTCCCGAGGCCTGGGAG
TGA

Upstream 100 bases:

>100_bases
ATCCCTGGTACACCAACCTGTGGCACAACATCGCCGACTCGCCGACTGTCGTCCCGACCCCACCGCCCGCCGTTCCGCCC
GCACCCCCGGCGCCGCACCC

Downstream 100 bases:

>100_bases
CGCGGGTTGCCGCCGTCGATTGCGGTACCAACTCGATTCGTCTGCTGGTCTCGGATATCGACGACTCCGGGCGGCTGACC
GATGTGCACCGCGAGATGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MISDDDIAAVTAQLGRAPRGMLEVSYRCPNGEPAVVKTAPRLPDGTPFPTLYYLTHPALTAAASRLESGGLMREMTERLA
VDEELAAAYRRAHESYLAERDAIEPLGTTVTAGGMPDRVKCLHVLIGHSLAVGPGVNPLGDEAIRELAGTMPGVLPEAWE

Sequences:

>Translated_160_residues
MISDDDIAAVTAQLGRAPRGMLEVSYRCPNGEPAVVKTAPRLPDGTPFPTLYYLTHPALTAAASRLESGGLMREMTERLA
VDEELAAAYRRAHESYLAERDAIEPLGTTVTAGGMPDRVKCLHVLIGHSLAVGPGVNPLGDEAIRELAGTMPGVLPEAWE
>Mature_160_residues
MISDDDIAAVTAQLGRAPRGMLEVSYRCPNGEPAVVKTAPRLPDGTPFPTLYYLTHPALTAAASRLESGGLMREMTERLA
VDEELAAAYRRAHESYLAERDAIEPLGTTVTAGGMPDRVKCLHVLIGHSLAVGPGVNPLGDEAIRELAGTMPGVLPEAWE

Specific function: Unknown

COG id: COG1507

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17032; Mature: 17032

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISDDDIAAVTAQLGRAPRGMLEVSYRCPNGEPAVVKTAPRLPDGTPFPTLYYLTHPALT
CCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCEEEEEHHHHHH
AAASRLESGGLMREMTERLAVDEELAAAYRRAHESYLAERDAIEPLGTTVTAGGMPDRVK
HHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHH
CLHVLIGHSLAVGPGVNPLGDEAIRELAGTMPGVLPEAWE
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MISDDDIAAVTAQLGRAPRGMLEVSYRCPNGEPAVVKTAPRLPDGTPFPTLYYLTHPALT
CCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCEEEEEHHHHHH
AAASRLESGGLMREMTERLAVDEELAAAYRRAHESYLAERDAIEPLGTTVTAGGMPDRVK
HHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHH
CLHVLIGHSLAVGPGVNPLGDEAIRELAGTMPGVLPEAWE
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA