| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is efeU [H]
Identifier: 169628252
GI number: 169628252
Start: 1173994
End: 1176045
Strand: Direct
Name: efeU [H]
Synonym: MAB_1159
Alternate gene names: 169628252
Gene position: 1173994-1176045 (Clockwise)
Preceding gene: 169628251
Following gene: 169628253
Centisome position: 23.17
GC content: 65.94
Gene sequence:
>2052_bases GTGGTCTTGTCAGACGCGATTCCCAACTTGCTCATCGGCCTGCGCGAGGGGCTTGAAGCCGGACTGGTGGTGAGCATTTT GCTTGCCGCCGTCCATCGATCCGCGCTGGCGGAGCAGGGCCGTCGCGTCACTGCTCCGATATGGCTGGGTGTGCTCGGCG CTCTCACGGTGTCCGCCAGCTTCGCGGCAGTACTCAACTCCACCACCAGTTCCCTGAGCGCCATCGGCCAGGACGTGGTG GGCGGGTTGCTCAGCATCCTGGCGGTCGGACTCGTCACCGCGATGATCTTCTGGATGTCGCGCACCGCGGCCAACCTGTC GGGTGAACTGTCCGGAAAGGTAGAGCATGCCCTGGTCCTCGGCGCGGGGGCACTCGCGCTGACCGCGTTCCTCGCGGTTG CCCGCGAGGGCCTGGAGACCACCCTGTTCTTCTGGACCGCGGCCAAGGCGGCCGGCGAGACCACTGGCCCGGTGGTCGGT GGCGCCCTCGGTCTGGCCATTGCCGTGGTGCTGTGCTGGCTGCTGTACCGGCGCGCGGTTCGCCTGAATCTCAGGGTGTT CTTCACTCGGACCGCCATCGTCCTGATCGTGATCGCCGCGGGCATCCTGGCCTACGGTGTGGGGGATCTGCAGACCGCGG GCTGGCTGCCCGGACACTCCTGGTACGCCTTCGATCTGAGCCCACGGATATCCGCGGACTCCTGGTGGGTAACCATCATC ACCGGCATCACACAGCTCACGCCCAGGATGACGGTGCTTCAGGTGCTGGCCTGGGTCGGATACCTGGTCATGGTCATTCC GGCGTTCATGAGGGTCTCGCGGATGGCGCCCTCACCCGCCGGGCCTGAGGAGGACCAGGCGCCATCGGCCTTTGCGCGCC TGATCGGCCAGCGTCCCGTCGCTGTCGCGGCTGCCATTGTGGTGGTGCCCGCGCTGTTGGCCGCGGCCGTTATCGCGATC TTGCCCGCGGCCAACCACGATGCCGGCGCCCAGGTGACGGTGACCGCCGAGGGCTGTGCCGATGACTGGAAATCGGCACG GTCCGGCTTGCAGACGTTCACCGTGATGAACAGGTCAGGCAAGACGGGGGAGATCAATCTCGTCGATACCAATAACGCGG TCGTTGCCGAGATCGAGACTCTGGGCCCATCCACGAGCGCTACTATGACGGCCGCGTTGTCGAATGGAACCTACAAATTC GTGTGCCTCATGGCCGGTGAGCCCGCCAAATACTCTGCGGCTCAACAAGTCAGTGGCGATTCGGTCCCCGGCGCTCCGCA ACCGGTGGTGCGTGTGACCGACGAAGATCTCGCGGTGCCGATGGCGGCATACCAGCGGTACGCCGATGGCTTGCTGGGTG TTCTCGGTGGTCAGGTCCGGGCCGTGCGCAACGACCTGGGGTCCGGCAACATCGAGGCCGCCAAGAAGGATTGGGTGCCG GCGATTTTGACCTGGAACCGGATTGGCGCCGCCTACGGCAGTTTCAAGGACTACGGAGACGCCATTGCCGGGCTGCCCCA CGGGCTGCCCGACGGGGTCGACGATCCCGATTTCAAAGGCTTGCGCCGCCTGGAATATGGGTTGTGGCATGGTCAGTCGG CGTCCACGCTGACTCCGGTCGCGGACGAGCTGGGGGCCACCATCGATACGTTGCGTGCCAACCTGTCGGATGTGATGACC GATCCGGCCGACCAGACCAAGCGTCCTCACGAAATCCTGGAGGACACCTTGCGTTTCCAGCTCATGGGCTTCACTGATCA GGGCGCGGGTACCGAATACCCGGAAGCGGCAGCGGCCGTCGATGCCACCCGGGCGGTGCTCGAGCAGTTCGCGCCGCTGG TCACCGCTCGTGCGCCGAAGCTGTTGGGGGAAAGCATGTCCCGGCTTGACGTGCTGGACGCCGCGCTCAAGGCCACGCAA CGGGATGGCCGCTGGCGCCCTCTCGCGCAGGTGCCGCTGCGCCAGCGACAGTCGGTAAACGCGGCGCTCGGCAATGCGGT CGAGAAGCTTGCCTCGGTACCGCTGCTCATCGAACTTCCGCCGAGCCGTTGA
Upstream 100 bases:
>100_bases AGCTAAATTCACGGCGGACGGGACTTTATGCCCGTCGTGTCGGGACCATTGCCCGTGAGGGTATTTGCACTGCGTATTAG GGGTGCCATACCTTATCTGC
Downstream 100 bases:
>100_bases CCAAGGAGTCGCGCAATATGGATGTCAATCGCAGGAACTTCCTTCGTGGTGCCGCCGTCGGAGCCGCGGGTACCGCGATC ACGGGTGCGGCGCTCGTCAA
Product: putative iron permease FTR1
Products: NA
Alternate protein names: Fe(2+) ion permease efeU; Ferrous iron uptake protein [H]
Number of amino acids: Translated: 683; Mature: 683
Protein sequence:
>683_residues MVLSDAIPNLLIGLREGLEAGLVVSILLAAVHRSALAEQGRRVTAPIWLGVLGALTVSASFAAVLNSTTSSLSAIGQDVV GGLLSILAVGLVTAMIFWMSRTAANLSGELSGKVEHALVLGAGALALTAFLAVAREGLETTLFFWTAAKAAGETTGPVVG GALGLAIAVVLCWLLYRRAVRLNLRVFFTRTAIVLIVIAAGILAYGVGDLQTAGWLPGHSWYAFDLSPRISADSWWVTII TGITQLTPRMTVLQVLAWVGYLVMVIPAFMRVSRMAPSPAGPEEDQAPSAFARLIGQRPVAVAAAIVVVPALLAAAVIAI LPAANHDAGAQVTVTAEGCADDWKSARSGLQTFTVMNRSGKTGEINLVDTNNAVVAEIETLGPSTSATMTAALSNGTYKF VCLMAGEPAKYSAAQQVSGDSVPGAPQPVVRVTDEDLAVPMAAYQRYADGLLGVLGGQVRAVRNDLGSGNIEAAKKDWVP AILTWNRIGAAYGSFKDYGDAIAGLPHGLPDGVDDPDFKGLRRLEYGLWHGQSASTLTPVADELGATIDTLRANLSDVMT DPADQTKRPHEILEDTLRFQLMGFTDQGAGTEYPEAAAAVDATRAVLEQFAPLVTARAPKLLGESMSRLDVLDAALKATQ RDGRWRPLAQVPLRQRQSVNAALGNAVEKLASVPLLIELPPSR
Sequences:
>Translated_683_residues MVLSDAIPNLLIGLREGLEAGLVVSILLAAVHRSALAEQGRRVTAPIWLGVLGALTVSASFAAVLNSTTSSLSAIGQDVV GGLLSILAVGLVTAMIFWMSRTAANLSGELSGKVEHALVLGAGALALTAFLAVAREGLETTLFFWTAAKAAGETTGPVVG GALGLAIAVVLCWLLYRRAVRLNLRVFFTRTAIVLIVIAAGILAYGVGDLQTAGWLPGHSWYAFDLSPRISADSWWVTII TGITQLTPRMTVLQVLAWVGYLVMVIPAFMRVSRMAPSPAGPEEDQAPSAFARLIGQRPVAVAAAIVVVPALLAAAVIAI LPAANHDAGAQVTVTAEGCADDWKSARSGLQTFTVMNRSGKTGEINLVDTNNAVVAEIETLGPSTSATMTAALSNGTYKF VCLMAGEPAKYSAAQQVSGDSVPGAPQPVVRVTDEDLAVPMAAYQRYADGLLGVLGGQVRAVRNDLGSGNIEAAKKDWVP AILTWNRIGAAYGSFKDYGDAIAGLPHGLPDGVDDPDFKGLRRLEYGLWHGQSASTLTPVADELGATIDTLRANLSDVMT DPADQTKRPHEILEDTLRFQLMGFTDQGAGTEYPEAAAAVDATRAVLEQFAPLVTARAPKLLGESMSRLDVLDAALKATQ RDGRWRPLAQVPLRQRQSVNAALGNAVEKLASVPLLIELPPSR >Mature_683_residues MVLSDAIPNLLIGLREGLEAGLVVSILLAAVHRSALAEQGRRVTAPIWLGVLGALTVSASFAAVLNSTTSSLSAIGQDVV GGLLSILAVGLVTAMIFWMSRTAANLSGELSGKVEHALVLGAGALALTAFLAVAREGLETTLFFWTAAKAAGETTGPVVG GALGLAIAVVLCWLLYRRAVRLNLRVFFTRTAIVLIVIAAGILAYGVGDLQTAGWLPGHSWYAFDLSPRISADSWWVTII TGITQLTPRMTVLQVLAWVGYLVMVIPAFMRVSRMAPSPAGPEEDQAPSAFARLIGQRPVAVAAAIVVVPALLAAAVIAI LPAANHDAGAQVTVTAEGCADDWKSARSGLQTFTVMNRSGKTGEINLVDTNNAVVAEIETLGPSTSATMTAALSNGTYKF VCLMAGEPAKYSAAQQVSGDSVPGAPQPVVRVTDEDLAVPMAAYQRYADGLLGVLGGQVRAVRNDLGSGNIEAAKKDWVP AILTWNRIGAAYGSFKDYGDAIAGLPHGLPDGVDDPDFKGLRRLEYGLWHGQSASTLTPVADELGATIDTLRANLSDVMT DPADQTKRPHEILEDTLRFQLMGFTDQGAGTEYPEAAAAVDATRAVLEQFAPLVTARAPKLLGESMSRLDVLDAALKATQ RDGRWRPLAQVPLRQRQSVNAALGNAVEKLASVPLLIELPPSR
Specific function: Functions only as an uptake system for Fe(2+) ion acquisition [H]
COG id: COG0672
COG function: function code P; High-affinity Fe2+/Pb2+ permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oxidase-dependent Fe transporter (OFeT) (TC 9.A.10.1) family [H]
Homologues:
Organism=Escherichia coli, GI1787254, Length=314, Percent_Identity=23.5668789808917, Blast_Score=74, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005217 - InterPro: IPR004923 [H]
Pfam domain/function: PF03239 FTR1 [H]
EC number: NA
Molecular weight: Translated: 71681; Mature: 71681
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLSDAIPNLLIGLREGLEAGLVVSILLAAVHRSALAEQGRRVTAPIWLGVLGALTVSAS CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHH FAAVLNSTTSSLSAIGQDVVGGLLSILAVGLVTAMIFWMSRTAANLSGELSGKVEHALVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHEE GAGALALTAFLAVAREGLETTLFFWTAAKAAGETTGPVVGGALGLAIAVVLCWLLYRRAV CCHHHHHHHHHHHHHHCCHHEEHEEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RLNLRVFFTRTAIVLIVIAAGILAYGVGDLQTAGWLPGHSWYAFDLSPRISADSWWVTII HHHHHEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHH TGITQLTPRMTVLQVLAWVGYLVMVIPAFMRVSRMAPSPAGPEEDQAPSAFARLIGQRPV HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHH AVAAAIVVVPALLAAAVIAILPAANHDAGAQVTVTAEGCADDWKSARSGLQTFTVMNRSG HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHCCHHEEEEECCCC KTGEINLVDTNNAVVAEIETLGPSTSATMTAALSNGTYKFVCLMAGEPAKYSAAQQVSGD CCCEEEEEECCCEEEEEEECCCCCCCHHEEEEECCCCEEEEEEEECCCCHHHHHHHCCCC SVPGAPQPVVRVTDEDLAVPMAAYQRYADGLLGVLGGQVRAVRNDLGSGNIEAAKKDWVP CCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCC AILTWNRIGAAYGSFKDYGDAIAGLPHGLPDGVDDPDFKGLRRLEYGLWHGQSASTLTPV HHEEHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC ADELGATIDTLRANLSDVMTDPADQTKRPHEILEDTLRFQLMGFTDQGAGTEYPEAAAAV HHHHCCHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHEEEEECCCCCCCCCCCHHHHHH DATRAVLEQFAPLVTARAPKLLGESMSRLDVLDAALKATQRDGRWRPLAQVPLRQRQSVN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHH AALGNAVEKLASVPLLIELPPSR HHHHHHHHHHHCCCEEEECCCCC >Mature Secondary Structure MVLSDAIPNLLIGLREGLEAGLVVSILLAAVHRSALAEQGRRVTAPIWLGVLGALTVSAS CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHH FAAVLNSTTSSLSAIGQDVVGGLLSILAVGLVTAMIFWMSRTAANLSGELSGKVEHALVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHEE GAGALALTAFLAVAREGLETTLFFWTAAKAAGETTGPVVGGALGLAIAVVLCWLLYRRAV CCHHHHHHHHHHHHHHCCHHEEHEEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RLNLRVFFTRTAIVLIVIAAGILAYGVGDLQTAGWLPGHSWYAFDLSPRISADSWWVTII HHHHHEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHH TGITQLTPRMTVLQVLAWVGYLVMVIPAFMRVSRMAPSPAGPEEDQAPSAFARLIGQRPV HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHH AVAAAIVVVPALLAAAVIAILPAANHDAGAQVTVTAEGCADDWKSARSGLQTFTVMNRSG HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHCCHHEEEEECCCC KTGEINLVDTNNAVVAEIETLGPSTSATMTAALSNGTYKFVCLMAGEPAKYSAAQQVSGD CCCEEEEEECCCEEEEEEECCCCCCCHHEEEEECCCCEEEEEEEECCCCHHHHHHHCCCC SVPGAPQPVVRVTDEDLAVPMAAYQRYADGLLGVLGGQVRAVRNDLGSGNIEAAKKDWVP CCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCC AILTWNRIGAAYGSFKDYGDAIAGLPHGLPDGVDDPDFKGLRRLEYGLWHGQSASTLTPV HHEEHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC ADELGATIDTLRANLSDVMTDPADQTKRPHEILEDTLRFQLMGFTDQGAGTEYPEAAAAV HHHHCCHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHEEEEECCCCCCCCCCCHHHHHH DATRAVLEQFAPLVTARAPKLLGESMSRLDVLDAALKATQRDGRWRPLAQVPLRQRQSVN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHH AALGNAVEKLASVPLLIELPPSR HHHHHHHHHHHCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]