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The map label for this gene is ycfQ [C]

Identifier: 169628242

GI number: 169628242

Start: 1164821

End: 1165465

Strand: Direct

Name: ycfQ [C]

Synonym: MAB_1149

Alternate gene names: 169628242

Gene position: 1164821-1165465 (Clockwise)

Preceding gene: 169628239

Following gene: 169628243

Centisome position: 22.99

GC content: 64.19

Gene sequence:

>645_bases
ATGGCGGTACCTAGTAGGCCGGATGTCCCCGGGCGGACTCCGCGGGTCCGGATGGCTGGCTCCGAGCGTCGCCGTCAGCT
GATCGATGTGGCACGGTCGCTCTTCGCCGAACGCGGGTATGAGGCAACCTCCATCGAGGAGATCGCTCAGCGCGCGGGGG
TGTCCAAGCCGGTTGTGTACGAACATTTCGGCGGCAAGGAGGGGCTTTACGCCGTTGTGGTGGATCGCGAGATGTCGGTG
TTGTTGGACGGCATCACCTCGTCGTTGACGAGTTATCGCTCGCGGGTCCGGCTCGAGCAGGTGGCGTTGGCGCTGCTGAG
CTACATCGAAGAGCGCACCGACGGCTTCCGGATTCTGATTCGGGATTCGCCGCCCGGGGTCAGCTCGGGTACCTATTCGA
GTCTGCTCAACGATGCGGTCAGCCAGGTGTCGAGCATCCTTGCGGGCGACTTCCAGCGCCGCGGTCTGGACGCCGAGATG
GCGCCGCTGTACGCGCAGGCTCTCGTCGGGCAGGTGTCGATGACGGCCCAATGGTGGCTCGATGCCCGCGAGCCCAAAAA
GGAAGTCGTTGCGGCCCATATCGTCAACCTGTGCTGGCATGGGTTGAAGCACCTGGAAGCCGATCCGCAGCTGCACGAGG
AATGA

Upstream 100 bases:

>100_bases
GGACTGTTACAGAATGAAGACTGTAGTCGACCACGGAGCAAGGCTTGTCCGGGCGACTCGGCAGGCTGGCGCGAGGCGCG
TCGTAGGAAAGTGATGGCAG

Downstream 100 bases:

>100_bases
CGCCCCGCGCAGGAACATCTGCGCACTGCGGACCGTTCGACTTAACGGATGGTTCGTAAAGGTGGTGGTCGGTTGTGACC
GGGTCTCGAGTGTTTGTTGG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; TetR-Family Transcriptional Regulator; Transcriptional Regulator; Regulatory Protein TetR; TetR-Type Transcriptional Regulator; TetR/AcrR Family Transcriptional Regulator; Transcriptional Regulatory Protein; Transcriptional Regulator TetR-Family; Transcriptional Regulator TetR Family Protein; Transcription Regulator; Transcription Regulator Tetr Family; Transcriptional Regulator Tetr Family; TetR-Family Regulatory Protein; TetR-Family Transcriptional Regulator Protein

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MAVPSRPDVPGRTPRVRMAGSERRRQLIDVARSLFAERGYEATSIEEIAQRAGVSKPVVYEHFGGKEGLYAVVVDREMSV
LLDGITSSLTSYRSRVRLEQVALALLSYIEERTDGFRILIRDSPPGVSSGTYSSLLNDAVSQVSSILAGDFQRRGLDAEM
APLYAQALVGQVSMTAQWWLDAREPKKEVVAAHIVNLCWHGLKHLEADPQLHEE

Sequences:

>Translated_214_residues
MAVPSRPDVPGRTPRVRMAGSERRRQLIDVARSLFAERGYEATSIEEIAQRAGVSKPVVYEHFGGKEGLYAVVVDREMSV
LLDGITSSLTSYRSRVRLEQVALALLSYIEERTDGFRILIRDSPPGVSSGTYSSLLNDAVSQVSSILAGDFQRRGLDAEM
APLYAQALVGQVSMTAQWWLDAREPKKEVVAAHIVNLCWHGLKHLEADPQLHEE
>Mature_213_residues
AVPSRPDVPGRTPRVRMAGSERRRQLIDVARSLFAERGYEATSIEEIAQRAGVSKPVVYEHFGGKEGLYAVVVDREMSVL
LDGITSSLTSYRSRVRLEQVALALLSYIEERTDGFRILIRDSPPGVSSGTYSSLLNDAVSQVSSILAGDFQRRGLDAEMA
PLYAQALVGQVSMTAQWWLDAREPKKEVVAAHIVNLCWHGLKHLEADPQLHEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23718; Mature: 23587

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVPSRPDVPGRTPRVRMAGSERRRQLIDVARSLFAERGYEATSIEEIAQRAGVSKPVVY
CCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCEEH
EHFGGKEGLYAVVVDREMSVLLDGITSSLTSYRSRVRLEQVALALLSYIEERTDGFRILI
HCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
RDSPPGVSSGTYSSLLNDAVSQVSSILAGDFQRRGLDAEMAPLYAQALVGQVSMTAQWWL
ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
DAREPKKEVVAAHIVNLCWHGLKHLEADPQLHEE
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
AVPSRPDVPGRTPRVRMAGSERRRQLIDVARSLFAERGYEATSIEEIAQRAGVSKPVVY
CCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCEEH
EHFGGKEGLYAVVVDREMSVLLDGITSSLTSYRSRVRLEQVALALLSYIEERTDGFRILI
HCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
RDSPPGVSSGTYSSLLNDAVSQVSSILAGDFQRRGLDAEMAPLYAQALVGQVSMTAQWWL
ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
DAREPKKEVVAAHIVNLCWHGLKHLEADPQLHEE
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA