| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is fabH
Identifier: 169628234
GI number: 169628234
Start: 1157354
End: 1158376
Strand: Reverse
Name: fabH
Synonym: MAB_1141c
Alternate gene names: 169628234
Gene position: 1158376-1157354 (Counterclockwise)
Preceding gene: 169628235
Following gene: 169628231
Centisome position: 22.86
GC content: 66.18
Gene sequence:
>1023_bases ATGACCGATATCGCGGAGATCACCGGCATCAACAAGATCGGCCTACTCAGCCTGGGGGCGTACCGACCCGAGCGCGTGGT CACCAACGACGAGATCTGCGAGCGCATCGAGTCTTCGGACGAGTGGATCTACACCCGCACCGGCATCAAAACCCGGCGGT TCGCCGCCGATGAGGAAACCGCTCAGACGCTGGCCATCGAGGCCGGGCGCAAGGCGATCGCCAATGCCTTGCTGACCGGT GCCGAGATCGACGCGGTGATCGTCGCCACCAGCACGCACTACCTGCAGACGCCGGCCTCGGCCCCGGCCGTGGCCACCGC GCTGGGCGCCCAAGGTGTCCCCGCCTTCGACCTGTCGGCCGGCTGCGCCGGATTCGGATACGCCGTGGGCGTGGCGGGCG ACATGATCCGGGGCGGCAGCGCCAGCAAGGTGCTGGTGATCGGCTCGGAAAAACTCTCCCCCGCACTGGATATGACCGAT CGCGGCAACTGTTTCATCTTCGGCGACGGGGCCGGCGCGGTTGTCGTCGGCGAGACCGCCGAACAAGGTATCGGCCCCAC CGTGTGGGGTAGCGACGGCAGCCAATCCAACGCCATTCGGCAGGACATCGACTGGATGGACTTCGCGGCGGCACCCGATC CGGAGGGCCCGCGCCCCTACTTACGTATCGAGGGTACGTCGGTATTCCGTTGGGCCGCATTCGAAATGGGTAAGGTCGGA CAGCGAGCCATGGAAGCCGCGAAGGTGGGGCCCGAGCAGATCGATGTCTTCGTACCGCATCAGGCCAACACCCGGATCAA CGAGCTGCTGGCCAAGAATCTGCACCTGCGCGCGGATGCGGTCATTGCCAATGACATCGAGCACACCGGCAACACCTCGG CGGCATCGGTGCCGTTGGCCATGGAGACACTGCTGTCCACCGGCGCCGCCAAGCCGGGCGATCTGGCGCTGCTCATCGGC TATGGCGCCGGGCTCAGCTACGCCGCACAGGTGGTCAGGATGCCTCCTGTGCCGTTCGAGTGA
Upstream 100 bases:
>100_bases AGACGCCGCCGAGCTGCTGATTCGCCTCGGTCTGGAGGCAGCACAGAATCAGGTGCATGCCTGGGGTTAGATCCCTGGAT GTGCCCGCTATGGTCTCCTC
Downstream 100 bases:
>100_bases TGTCGCTGCGCGAATGTAACCGCACACATACGATCTGCGTCGATTCAGTGCGTGGCGTTACGTTCGGCGTTGGTCGTTCG ACGCCTTGCGGTAGGCCCTA
Product: 3-oxoacyl-(acyl carrier protein) synthase III
Products: NA
Alternate protein names: 3-oxoacyl-[acyl-carrier-protein] synthase III; Beta-ketoacyl-ACP synthase III; KAS III
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MTDIAEITGINKIGLLSLGAYRPERVVTNDEICERIESSDEWIYTRTGIKTRRFAADEETAQTLAIEAGRKAIANALLTG AEIDAVIVATSTHYLQTPASAPAVATALGAQGVPAFDLSAGCAGFGYAVGVAGDMIRGGSASKVLVIGSEKLSPALDMTD RGNCFIFGDGAGAVVVGETAEQGIGPTVWGSDGSQSNAIRQDIDWMDFAAAPDPEGPRPYLRIEGTSVFRWAAFEMGKVG QRAMEAAKVGPEQIDVFVPHQANTRINELLAKNLHLRADAVIANDIEHTGNTSAASVPLAMETLLSTGAAKPGDLALLIG YGAGLSYAAQVVRMPPVPFE
Sequences:
>Translated_340_residues MTDIAEITGINKIGLLSLGAYRPERVVTNDEICERIESSDEWIYTRTGIKTRRFAADEETAQTLAIEAGRKAIANALLTG AEIDAVIVATSTHYLQTPASAPAVATALGAQGVPAFDLSAGCAGFGYAVGVAGDMIRGGSASKVLVIGSEKLSPALDMTD RGNCFIFGDGAGAVVVGETAEQGIGPTVWGSDGSQSNAIRQDIDWMDFAAAPDPEGPRPYLRIEGTSVFRWAAFEMGKVG QRAMEAAKVGPEQIDVFVPHQANTRINELLAKNLHLRADAVIANDIEHTGNTSAASVPLAMETLLSTGAAKPGDLALLIG YGAGLSYAAQVVRMPPVPFE >Mature_339_residues TDIAEITGINKIGLLSLGAYRPERVVTNDEICERIESSDEWIYTRTGIKTRRFAADEETAQTLAIEAGRKAIANALLTGA EIDAVIVATSTHYLQTPASAPAVATALGAQGVPAFDLSAGCAGFGYAVGVAGDMIRGGSASKVLVIGSEKLSPALDMTDR GNCFIFGDGAGAVVVGETAEQGIGPTVWGSDGSQSNAIRQDIDWMDFAAAPDPEGPRPYLRIEGTSVFRWAAFEMGKVGQ RAMEAAKVGPEQIDVFVPHQANTRINELLAKNLHLRADAVIANDIEHTGNTSAASVPLAMETLLSTGAAKPGDLALLIGY GAGLSYAAQVVRMPPVPFE
Specific function: Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the
COG id: COG0332
COG function: function code I; 3-oxoacyl-[acyl-carrier-protein] synthase III
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fabH family
Homologues:
Organism=Escherichia coli, GI1787333, Length=324, Percent_Identity=37.6543209876543, Blast_Score=214, Evalue=5e-57,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FABH_MYCA9 (B1MKD7)
Other databases:
- EMBL: CU458896 - RefSeq: YP_001701883.1 - ProteinModelPortal: B1MKD7 - SMR: B1MKD7 - EnsemblBacteria: EBMYCT00000007009 - GeneID: 5963666 - GenomeReviews: CU458896_GR - KEGG: mab:MAB_1141c - GeneTree: EBGT00050000016069 - HOGENOM: HBG649927 - OMA: VIANDIE - ProtClustDB: PRK09352 - BioCyc: MABS561007:MAB_1141C-MONOMER - GO: GO:0005737 - HAMAP: MF_01815 - InterPro: IPR013751 - InterPro: IPR013747 - InterPro: IPR004655 - InterPro: IPR016039 - InterPro: IPR016038 - Gene3D: G3DSA:3.40.47.10 - TIGRFAMs: TIGR00747
Pfam domain/function: PF08545 ACP_syn_III; PF08541 ACP_syn_III_C; SSF53901 Thiolase-like
EC number: =2.3.1.180
Molecular weight: Translated: 35547; Mature: 35415
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: ACT_SITE 122-122 ACT_SITE 260-260 ACT_SITE 291-291
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDIAEITGINKIGLLSLGAYRPERVVTNDEICERIESSDEWIYTRTGIKTRRFAADEET CCCCHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCEEEECCCHHH AQTLAIEAGRKAIANALLTGAEIDAVIVATSTHYLQTPASAPAVATALGAQGVPAFDLSA HHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEECCCCCCHHHHHHCCCCCCCEECCC GCAGFGYAVGVAGDMIRGGSASKVLVIGSEKLSPALDMTDRGNCFIFGDGAGAVVVGETA CCCCHHHHHHCCHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCEEEECCCH EQGIGPTVWGSDGSQSNAIRQDIDWMDFAAAPDPEGPRPYLRIEGTSVFRWAAFEMGKVG HHCCCCEEECCCCCCCCHHHHCCCHHHCCCCCCCCCCCCEEEECCCCEEEEEHHHHHHHH QRAMEAAKVGPEQIDVFVPHQANTRINELLAKNLHLRADAVIANDIEHTGNTSAASVPLA HHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCEEECEEEECCHHCCCCCCCCCCHHH METLLSTGAAKPGDLALLIGYGAGLSYAAQVVRMPPVPFE HHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHCCCCCCCC >Mature Secondary Structure TDIAEITGINKIGLLSLGAYRPERVVTNDEICERIESSDEWIYTRTGIKTRRFAADEET CCCHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCEEEECCCHHH AQTLAIEAGRKAIANALLTGAEIDAVIVATSTHYLQTPASAPAVATALGAQGVPAFDLSA HHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEECCCCCCHHHHHHCCCCCCCEECCC GCAGFGYAVGVAGDMIRGGSASKVLVIGSEKLSPALDMTDRGNCFIFGDGAGAVVVGETA CCCCHHHHHHCCHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCEEEECCCH EQGIGPTVWGSDGSQSNAIRQDIDWMDFAAAPDPEGPRPYLRIEGTSVFRWAAFEMGKVG HHCCCCEEECCCCCCCCHHHHCCCHHHCCCCCCCCCCCCEEEECCCCEEEEEHHHHHHHH QRAMEAAKVGPEQIDVFVPHQANTRINELLAKNLHLRADAVIANDIEHTGNTSAASVPLA HHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCEEECEEEECCHHCCCCCCCCCCHHH METLLSTGAAKPGDLALLIGYGAGLSYAAQVVRMPPVPFE HHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA