| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is metG [H]
Identifier: 169628221
GI number: 169628221
Start: 1139038
End: 1140609
Strand: Reverse
Name: metG [H]
Synonym: MAB_1128c
Alternate gene names: 169628221
Gene position: 1140609-1139038 (Counterclockwise)
Preceding gene: 169628225
Following gene: 169628220
Centisome position: 22.51
GC content: 64.25
Gene sequence:
>1572_bases ATGCCTGAATCATTGGATCCGTTCTACATCACCACCGCCATCGCGTATCCGAACGGCGAACCGCACATCGGACACGCATA TGAGTACGTCGCGACCGACGCCGTCGCCCGCTTCAAACGGCTGGACGGCTTCGACGTGCGCTATCTCACGGGCACCGATG AGCACGGTTTGAAGGTGGCGCAGACGGCCGCCGCGGCCGGAATCCCCACCGCGCAGCTGGCCCGGCACAATTCCGATGTG TTCGAGGCGCTACAGCGCACACTCAACATCTCCTTCGACCGGTTCATCCGCACGACCGACCCGGATCACTACGAGGCCTC GAAGGCCATCTGGCGCAAGATGGCCGATAACGGTGACATCTATTTGGACACCTACTCCGGCTGGTACTCGGTGCGCGACG AGGCGTACTACACCGACGCGGAGACCACGGTGGCCCCCGACGGCACCCGCACCGCCACCGCGACGGGGACTCCGGTCGAC TGGACCGAGGAGCATTCCTATTTCTTCAGGCTCTCGGCGTACCAGGACAAGCTGCTGGCGCACTACGAGGCACATCCCGA GTTCATCGGCCCCGATGTGCGACGCAACGAGGTGGTCAGCTTCGTCTCCGGCGGGCTGCGCGACCTGTCCATCTCACGGA CCACCTTCGACTGGGGCGTGCCGGTCCCCGACAACCCCGAACATGTCATGTACGTGTGGGTGGACGCGCTGACCAACTAC CTGACGGGGGTCGGCTACCCGGATACCGATTCGGAGCTGTTCGGGCGGTACTGGCCCGCCAACATCCACATGATCGGCAA GGACATCATCCGGTTCCACACCGTGTACTGGCCCGCCTTCCTGATGTCTGCCGGGATCGCGCTGCCCCAGCGGGTCTTCG CGCACGGCTTCCTGACCAACAAGGGCGAGAAGATGAGCAAGTCGATCGGCAACGTCGTCGACCCCATCAACCTCGTCAAC ACCTTTGGCCTGGATCAGGTGCGCTACTTTCTGCTGCGCGAGGTGCCGTTCGGGCAGGACGGCAGCTATACCGAAGAAGG CCTGATCGGACGGATCAACGCCGACCTGGCCAACGAGCTGGGCAATCTGGCGCAGCGGTCACTGTCGATGGTGGCCAAGA ACCTGGGCGGAATCGTGCCGGAGCCGGGTGAATTCGCCCCCGAGGACACCGAACTCCTCGCCGCCGCCGACACGCTGCTG GAGCAGGCCCGGACGCATTTCGAGGTGCCCGCCATGCATCTGGCGCTGGAAGCGATCTGGCAGGTGCTGGGGGCGAGCAA TCGGTACTTCTCGGCACAGGAGCCCTGGGTGCTGGCCAAGAGCTTCCAGACAGACGGATCCGCGGCGGACCAAGAGCGCT TCGGCACCGTGCTGTACACCACGCTGGAAGTGGTTCGAATTGTCGCGCTGTTGGTGCAGCCGGTGATGCCCGAGTCGGCA GCCAAGCTGCTGGATCTGTTGGGCCAGGCCGACGATCAGCGGGACTTCGCGGCCATCGGAACACGGTTGAAGCCCGGCGT GAGCCTGCCCGCGCCGACGGGTGTGTTCCCGAAATATCAGGTGCCCAAGTAG
Upstream 100 bases:
>100_bases TCGGGTGGGCGGGAACGAATGCGGTCGGGTGGGGCCTGCCTGTTATTGCCGGGCGTCATCAGGTATCCATTCTATTTGGA TAGATACAGTTGCTCCCACC
Downstream 100 bases:
>100_bases GCCGCCGAATGTGAGCCCGGTCACGGTCCGTCACAGATTTCGTCGCCCCGGTGTCTTAAGGGCATCAGCGACGGAAAGGA AGTCACCGAAATGACCGAGA
Product: methionyl-tRNA synthetase
Products: NA
Alternate protein names: Methionine--tRNA ligase; MetRS [H]
Number of amino acids: Translated: 523; Mature: 522
Protein sequence:
>523_residues MPESLDPFYITTAIAYPNGEPHIGHAYEYVATDAVARFKRLDGFDVRYLTGTDEHGLKVAQTAAAAGIPTAQLARHNSDV FEALQRTLNISFDRFIRTTDPDHYEASKAIWRKMADNGDIYLDTYSGWYSVRDEAYYTDAETTVAPDGTRTATATGTPVD WTEEHSYFFRLSAYQDKLLAHYEAHPEFIGPDVRRNEVVSFVSGGLRDLSISRTTFDWGVPVPDNPEHVMYVWVDALTNY LTGVGYPDTDSELFGRYWPANIHMIGKDIIRFHTVYWPAFLMSAGIALPQRVFAHGFLTNKGEKMSKSIGNVVDPINLVN TFGLDQVRYFLLREVPFGQDGSYTEEGLIGRINADLANELGNLAQRSLSMVAKNLGGIVPEPGEFAPEDTELLAAADTLL EQARTHFEVPAMHLALEAIWQVLGASNRYFSAQEPWVLAKSFQTDGSAADQERFGTVLYTTLEVVRIVALLVQPVMPESA AKLLDLLGQADDQRDFAAIGTRLKPGVSLPAPTGVFPKYQVPK
Sequences:
>Translated_523_residues MPESLDPFYITTAIAYPNGEPHIGHAYEYVATDAVARFKRLDGFDVRYLTGTDEHGLKVAQTAAAAGIPTAQLARHNSDV FEALQRTLNISFDRFIRTTDPDHYEASKAIWRKMADNGDIYLDTYSGWYSVRDEAYYTDAETTVAPDGTRTATATGTPVD WTEEHSYFFRLSAYQDKLLAHYEAHPEFIGPDVRRNEVVSFVSGGLRDLSISRTTFDWGVPVPDNPEHVMYVWVDALTNY LTGVGYPDTDSELFGRYWPANIHMIGKDIIRFHTVYWPAFLMSAGIALPQRVFAHGFLTNKGEKMSKSIGNVVDPINLVN TFGLDQVRYFLLREVPFGQDGSYTEEGLIGRINADLANELGNLAQRSLSMVAKNLGGIVPEPGEFAPEDTELLAAADTLL EQARTHFEVPAMHLALEAIWQVLGASNRYFSAQEPWVLAKSFQTDGSAADQERFGTVLYTTLEVVRIVALLVQPVMPESA AKLLDLLGQADDQRDFAAIGTRLKPGVSLPAPTGVFPKYQVPK >Mature_522_residues PESLDPFYITTAIAYPNGEPHIGHAYEYVATDAVARFKRLDGFDVRYLTGTDEHGLKVAQTAAAAGIPTAQLARHNSDVF EALQRTLNISFDRFIRTTDPDHYEASKAIWRKMADNGDIYLDTYSGWYSVRDEAYYTDAETTVAPDGTRTATATGTPVDW TEEHSYFFRLSAYQDKLLAHYEAHPEFIGPDVRRNEVVSFVSGGLRDLSISRTTFDWGVPVPDNPEHVMYVWVDALTNYL TGVGYPDTDSELFGRYWPANIHMIGKDIIRFHTVYWPAFLMSAGIALPQRVFAHGFLTNKGEKMSKSIGNVVDPINLVNT FGLDQVRYFLLREVPFGQDGSYTEEGLIGRINADLANELGNLAQRSLSMVAKNLGGIVPEPGEFAPEDTELLAAADTLLE QARTHFEVPAMHLALEAIWQVLGASNRYFSAQEPWVLAKSFQTDGSAADQERFGTVLYTTLEVVRIVALLVQPVMPESAA KLLDLLGQADDQRDFAAIGTRLKPGVSLPAPTGVFPKYQVPK
Specific function: Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation [H]
COG id: COG0143
COG function: function code J; Methionyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily [H]
Homologues:
Organism=Homo sapiens, GI24308436, Length=514, Percent_Identity=38.3268482490272, Blast_Score=349, Evalue=4e-96, Organism=Homo sapiens, GI14043022, Length=527, Percent_Identity=26.7552182163188, Blast_Score=159, Evalue=8e-39, Organism=Escherichia coli, GI1788432, Length=513, Percent_Identity=26.7056530214425, Blast_Score=185, Evalue=6e-48, Organism=Escherichia coli, GI1786861, Length=179, Percent_Identity=24.5810055865922, Blast_Score=63, Evalue=4e-11, Organism=Caenorhabditis elegans, GI212645096, Length=531, Percent_Identity=35.969868173258, Blast_Score=322, Evalue=3e-88, Organism=Caenorhabditis elegans, GI71992781, Length=426, Percent_Identity=34.7417840375587, Blast_Score=242, Evalue=3e-64, Organism=Caenorhabditis elegans, GI17540794, Length=533, Percent_Identity=26.4540337711069, Blast_Score=149, Evalue=4e-36, Organism=Saccharomyces cerevisiae, GI6321610, Length=542, Percent_Identity=31.1808118081181, Blast_Score=292, Evalue=9e-80, Organism=Saccharomyces cerevisiae, GI6321704, Length=521, Percent_Identity=22.8406909788868, Blast_Score=105, Evalue=2e-23, Organism=Saccharomyces cerevisiae, GI6323414, Length=175, Percent_Identity=27.4285714285714, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI21358483, Length=501, Percent_Identity=38.9221556886228, Blast_Score=346, Evalue=3e-95, Organism=Drosophila melanogaster, GI24655311, Length=552, Percent_Identity=25, Blast_Score=134, Evalue=2e-31, Organism=Drosophila melanogaster, GI21355409, Length=179, Percent_Identity=26.2569832402235, Blast_Score=69, Evalue=1e-11,
Paralogues:
None
Copy number: 871 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001412 - InterPro: IPR015413 - InterPro: IPR014758 - InterPro: IPR014729 - InterPro: IPR009080 [H]
Pfam domain/function: PF09334 tRNA-synt_1g [H]
EC number: =6.1.1.10 [H]
Molecular weight: Translated: 58107; Mature: 57976
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPESLDPFYITTAIAYPNGEPHIGHAYEYVATDAVARFKRLDGFDVRYLTGTDEHGLKVA CCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHH QTAAAAGIPTAQLARHNSDVFEALQRTLNISFDRFIRTTDPDHYEASKAIWRKMADNGDI HHHHHCCCCHHHHHHCCHHHHHHHHHHHCCCHHHHEECCCCCHHHHHHHHHHHHCCCCCE YLDTYSGWYSVRDEAYYTDAETTVAPDGTRTATATGTPVDWTEEHSYFFRLSAYQDKLLA EEEECCCEEEECCCEEEECCCCEECCCCCCEEECCCCCCCCCCCCCEEEEEHHHHHHHHH HYEAHPEFIGPDVRRNEVVSFVSGGLRDLSISRTTFDWGVPVPDNPEHVMYVWVDALTNY HHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCEEEEEEHHHHHHH LTGVGYPDTDSELFGRYWPANIHMIGKDIIRFHTVYWPAFLMSAGIALPQRVFAHGFLTN HHCCCCCCCCHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC KGEKMSKSIGNVVDPINLVNTFGLDQVRYFLLREVPFGQDGSYTEEGLIGRINADLANEL CCHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEECHHHHHHH GNLAQRSLSMVAKNLGGIVPEPGEFAPEDTELLAAADTLLEQARTHFEVPAMHLALEAIW HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH QVLGASNRYFSAQEPWVLAKSFQTDGSAADQERFGTVLYTTLEVVRIVALLVQPVMPESA HHHCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH AKLLDLLGQADDQRDFAAIGTRLKPGVSLPAPTGVFPKYQVPK HHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PESLDPFYITTAIAYPNGEPHIGHAYEYVATDAVARFKRLDGFDVRYLTGTDEHGLKVA CCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHH QTAAAAGIPTAQLARHNSDVFEALQRTLNISFDRFIRTTDPDHYEASKAIWRKMADNGDI HHHHHCCCCHHHHHHCCHHHHHHHHHHHCCCHHHHEECCCCCHHHHHHHHHHHHCCCCCE YLDTYSGWYSVRDEAYYTDAETTVAPDGTRTATATGTPVDWTEEHSYFFRLSAYQDKLLA EEEECCCEEEECCCEEEECCCCEECCCCCCEEECCCCCCCCCCCCCEEEEEHHHHHHHHH HYEAHPEFIGPDVRRNEVVSFVSGGLRDLSISRTTFDWGVPVPDNPEHVMYVWVDALTNY HHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCEEEEEEHHHHHHH LTGVGYPDTDSELFGRYWPANIHMIGKDIIRFHTVYWPAFLMSAGIALPQRVFAHGFLTN HHCCCCCCCCHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC KGEKMSKSIGNVVDPINLVNTFGLDQVRYFLLREVPFGQDGSYTEEGLIGRINADLANEL CCHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEECHHHHHHH GNLAQRSLSMVAKNLGGIVPEPGEFAPEDTELLAAADTLLEQARTHFEVPAMHLALEAIW HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH QVLGASNRYFSAQEPWVLAKSFQTDGSAADQERFGTVLYTTLEVVRIVALLVQPVMPESA HHHCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH AKLLDLLGQADDQRDFAAIGTRLKPGVSLPAPTGVFPKYQVPK HHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]