| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is ycbL [C]
Identifier: 169628207
GI number: 169628207
Start: 1126164
End: 1126883
Strand: Direct
Name: ycbL [C]
Synonym: MAB_1114
Alternate gene names: 169628207
Gene position: 1126164-1126883 (Clockwise)
Preceding gene: 169628204
Following gene: 169628208
Centisome position: 22.22
GC content: 67.08
Gene sequence:
>720_bases GTGTCGTCTCCGGATCTGCAGCAGCTCGCCCCTTCGCTGTTCCGTCTGCGTATTCCGGGTGGCCGGGCACATCTGCTGAA CTGCTATCTGTGGCTGGCGCCGGACGGCGTGACGCTGATCGACACGGGATGGCCCGATAGCGCGGAGCTGATCGAGCAGG CGCTCCATCAGCTCGGCAGGGGCCGCACAGACATCGTCCGGATCGTGCTCACCCATTTTCACGAGGACCATGTGGGAGCC GCGGCCGAGATAGCCGCCTGGTCGCGGGCCGAAGTAATTGCGGGAGAGCCTGACTCACCCTTCATCACCGGTGAACGCGG CGGGCCGGTGCCCGTGTTGACCGCGGGAGAGCAAGCCCTGCATCCCGGGTTCACCGAGCCACCACACGGGCCGGTGTGCC GCGTGGACCGCGCGGTGAAAGACGGTGAGGTGCTGGATTTCGCGGGCGGCGCGCACGTTATCGCGGTGCCGGGGCACACC CCCGGCAGTATTGCCTTGTATCTGCCCGCCGCCGATGCTGTGCTGACCGGCGATGCGGTGGCCGAATTCAACGGGCAGGT CATTCTCGGCGTGTTCAACTCTGATCGGCAGGTGGCGGCGAGGTCGCTGTCCAGGCTGGCTGCCACCGGCGCCGAGATCG GGGGTTTCGGCCACGGTGAGGCCATCCTGGAGAAGGCCAGTGCGCGCATTGCCACGGCCATCGACGCGTTTGGTGAGTGA
Upstream 100 bases:
>100_bases CCCTTGCATTTTGCTTATCCCTCCGATTGTGGCGCAAGGAACATCTGGCCGCACGGCTCTGATGAGGAACGAGCATCGCG CGCCGCGTAGCGTGGTGTGG
Downstream 100 bases:
>100_bases GATGTCCCACTTTCCAGCGTGTTCCCAGGTTGGCAGTCCACACTTCTAAGGTGACGCGGACACGGTGGGCCGGGTTGGGC CTTCTCGCCAGTGTTGTGGT
Product: metallo-beta-lactamase superfamily
Products: NA
Alternate protein names: Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Family Protein; Metallo-Beta-Lactamase; Metallo-Beta-Lactamase-Like Protein; Metal-Dependent Hydrolase; Hydrolase; Metallo-Beta-Lactamase Superfamily; Metallo-Beta-Lactamase Superfamily Protein; Glyoxalase II Family Member; Zn-Dependent Hydrolase Including Glyoxylases; Zinc-Dependent Hydrolase; Zn-Dependent Hydrolase; Beta-Lactamase-Like Protein
Number of amino acids: Translated: 239; Mature: 238
Protein sequence:
>239_residues MSSPDLQQLAPSLFRLRIPGGRAHLLNCYLWLAPDGVTLIDTGWPDSAELIEQALHQLGRGRTDIVRIVLTHFHEDHVGA AAEIAAWSRAEVIAGEPDSPFITGERGGPVPVLTAGEQALHPGFTEPPHGPVCRVDRAVKDGEVLDFAGGAHVIAVPGHT PGSIALYLPAADAVLTGDAVAEFNGQVILGVFNSDRQVAARSLSRLAATGAEIGGFGHGEAILEKASARIATAIDAFGE
Sequences:
>Translated_239_residues MSSPDLQQLAPSLFRLRIPGGRAHLLNCYLWLAPDGVTLIDTGWPDSAELIEQALHQLGRGRTDIVRIVLTHFHEDHVGA AAEIAAWSRAEVIAGEPDSPFITGERGGPVPVLTAGEQALHPGFTEPPHGPVCRVDRAVKDGEVLDFAGGAHVIAVPGHT PGSIALYLPAADAVLTGDAVAEFNGQVILGVFNSDRQVAARSLSRLAATGAEIGGFGHGEAILEKASARIATAIDAFGE >Mature_238_residues SSPDLQQLAPSLFRLRIPGGRAHLLNCYLWLAPDGVTLIDTGWPDSAELIEQALHQLGRGRTDIVRIVLTHFHEDHVGAA AEIAAWSRAEVIAGEPDSPFITGERGGPVPVLTAGEQALHPGFTEPPHGPVCRVDRAVKDGEVLDFAGGAHVIAVPGHTP GSIALYLPAADAVLTGDAVAEFNGQVILGVFNSDRQVAARSLSRLAATGAEIGGFGHGEAILEKASARIATAIDAFGE
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24960; Mature: 24829
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSPDLQQLAPSLFRLRIPGGRAHLLNCYLWLAPDGVTLIDTGWPDSAELIEQALHQLGR CCCCCHHHHHHHHEEEECCCCCEEEEEEEEEECCCCCEEEECCCCCHHHHHHHHHHHHCC GRTDIVRIVLTHFHEDHVGAAAEIAAWSRAEVIAGEPDSPFITGERGGPVPVLTAGEQAL CHHHHHHHHHHHHCCCCCCCHHHHHHCCCCEEEECCCCCCEEECCCCCCEEEEECCCHHH HPGFTEPPHGPVCRVDRAVKDGEVLDFAGGAHVIAVPGHTPGSIALYLPAADAVLTGDAV CCCCCCCCCCCCEECCCCCCCCCEEEECCCEEEEEECCCCCCCEEEEEECCCEEEECCHH AEFNGQVILGVFNSDRQVAARSLSRLAATGAEIGGFGHGEAILEKASARIATAIDAFGE EECCCEEEEEEECCCHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SSPDLQQLAPSLFRLRIPGGRAHLLNCYLWLAPDGVTLIDTGWPDSAELIEQALHQLGR CCCCHHHHHHHHEEEECCCCCEEEEEEEEEECCCCCEEEECCCCCHHHHHHHHHHHHCC GRTDIVRIVLTHFHEDHVGAAAEIAAWSRAEVIAGEPDSPFITGERGGPVPVLTAGEQAL CHHHHHHHHHHHHCCCCCCCHHHHHHCCCCEEEECCCCCCEEECCCCCCEEEEECCCHHH HPGFTEPPHGPVCRVDRAVKDGEVLDFAGGAHVIAVPGHTPGSIALYLPAADAVLTGDAV CCCCCCCCCCCCEECCCCCCCCCEEEECCCEEEEEECCCCCCCEEEEEECCCEEEECCHH AEFNGQVILGVFNSDRQVAARSLSRLAATGAEIGGFGHGEAILEKASARIATAIDAFGE EECCCEEEEEEECCCHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA