| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628194
Identifier: 169628194
GI number: 169628194
Start: 1114590
End: 1115312
Strand: Reverse
Name: 169628194
Synonym: MAB_1100c
Alternate gene names: NA
Gene position: 1115312-1114590 (Counterclockwise)
Preceding gene: 169628198
Following gene: 169628193
Centisome position: 22.01
GC content: 60.58
Gene sequence:
>723_bases ATGCCGCCGCCGACTGGGAACGACCCCGGATCACCACCGACGCGGCTCGGCGCTCTTGAACTCGATCTCGCACCCGATCT TCCCGGGATCTACGCGTGGTATGCGCAGCTTGCCTTGTCTGAGGATGATTGGCATCCGCGGATGCGCAATGGATTCGACG TCGCGGGATTCGACCTAGTAAATGCGATCGAAGATTACGCCCGCATCCATGAGCCCGCGGCGGTGGAACTCAAAGGAGCA GCCACCTACGGGTTGAACTGGTTCGGCTCGATACGACGACAGTCCATCACCCGACGGTCCGCTGGTTCGGCCGAATCACC CATCAACGACCGACTTGGAGAGCTAGCTGCGACTGCAGACAATCGTCGGCTCCTCACCCAGCTGCTACTTTCGGCTCCGC CTGTCTTCGCCAGTCCGCTCTACATCGGCGTCGCGACGAACCTGCGAGAGCGACTTGCTGAACACCGCGCTAGCTTTGAG AAGGCAAACACACTGCTCCGAAGCAAGCCAGAACAAGCCGCCAACTTGCAATTTCTCGGCCGCGACCTTGGTGCGCGACT CGCGGGGGCAGGGATACCGCTCGAACGACTTGAGTGTTGGATTATGACGGCGCCACAACCGCCACCCGCCGACAGTGGGC CAACCACCAACCAGCGATCGGTTGCCCAAGCCGCCGAATGGATTGTCCAGCGAATCTTCCAACCCATTCTAGGGAGACAG TAA
Upstream 100 bases:
>100_bases CGACGCTACCAGCGCAGGTGCCCCCGTCATGGGAAGACACGACAGTTTGGCCCGTGGATATGCGTCACCTCGGCGACAAG CCACGACCTAGGATCAGGCC
Downstream 100 bases:
>100_bases ACATGAGCCTGAGTCAACTCGGCGGCGGACCGACGTTTCAGAACCACGTCCAAGGCACGGTCGGCCAGTTCAGAACACCG GCGGGCAGGGTCAACTACCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 240; Mature: 239
Protein sequence:
>240_residues MPPPTGNDPGSPPTRLGALELDLAPDLPGIYAWYAQLALSEDDWHPRMRNGFDVAGFDLVNAIEDYARIHEPAAVELKGA ATYGLNWFGSIRRQSITRRSAGSAESPINDRLGELAATADNRRLLTQLLLSAPPVFASPLYIGVATNLRERLAEHRASFE KANTLLRSKPEQAANLQFLGRDLGARLAGAGIPLERLECWIMTAPQPPPADSGPTTNQRSVAQAAEWIVQRIFQPILGRQ
Sequences:
>Translated_240_residues MPPPTGNDPGSPPTRLGALELDLAPDLPGIYAWYAQLALSEDDWHPRMRNGFDVAGFDLVNAIEDYARIHEPAAVELKGA ATYGLNWFGSIRRQSITRRSAGSAESPINDRLGELAATADNRRLLTQLLLSAPPVFASPLYIGVATNLRERLAEHRASFE KANTLLRSKPEQAANLQFLGRDLGARLAGAGIPLERLECWIMTAPQPPPADSGPTTNQRSVAQAAEWIVQRIFQPILGRQ >Mature_239_residues PPPTGNDPGSPPTRLGALELDLAPDLPGIYAWYAQLALSEDDWHPRMRNGFDVAGFDLVNAIEDYARIHEPAAVELKGAA TYGLNWFGSIRRQSITRRSAGSAESPINDRLGELAATADNRRLLTQLLLSAPPVFASPLYIGVATNLRERLAEHRASFEK ANTLLRSKPEQAANLQFLGRDLGARLAGAGIPLERLECWIMTAPQPPPADSGPTTNQRSVAQAAEWIVQRIFQPILGRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26194; Mature: 26063
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPPTGNDPGSPPTRLGALELDLAPDLPGIYAWYAQLALSEDDWHPRMRNGFDVAGFDLV CCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCHHHCCCCCCHHHHH NAIEDYARIHEPAAVELKGAATYGLNWFGSIRRQSITRRSAGSAESPINDRLGELAATAD HHHHHHHHHCCCCEEEECCCEECCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCC NRRLLTQLLLSAPPVFASPLYIGVATNLRERLAEHRASFEKANTLLRSKPEQAANLQFLG HHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH RDLGARLAGAGIPLERLECWIMTAPQPPPADSGPTTNQRSVAQAAEWIVQRIFQPILGRQ HHHHHHHHCCCCCHHHHEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PPPTGNDPGSPPTRLGALELDLAPDLPGIYAWYAQLALSEDDWHPRMRNGFDVAGFDLV CCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCHHHCCCCCCHHHHH NAIEDYARIHEPAAVELKGAATYGLNWFGSIRRQSITRRSAGSAESPINDRLGELAATAD HHHHHHHHHCCCCEEEECCCEECCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCC NRRLLTQLLLSAPPVFASPLYIGVATNLRERLAEHRASFEKANTLLRSKPEQAANLQFLG HHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH RDLGARLAGAGIPLERLECWIMTAPQPPPADSGPTTNQRSVAQAAEWIVQRIFQPILGRQ HHHHHHHHCCCCCHHHHEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA