| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628193
Identifier: 169628193
GI number: 169628193
Start: 1112353
End: 1114635
Strand: Reverse
Name: 169628193
Synonym: MAB_1099c
Alternate gene names: NA
Gene position: 1114635-1112353 (Counterclockwise)
Preceding gene: 169628194
Following gene: 169628187
Centisome position: 22.0
GC content: 55.76
Gene sequence:
>2283_bases ATGGATTGTCCAGCGAATCTTCCAACCCATTCTAGGGAGACAGTAAACATGAGCCTGAGTCAACTCGGCGGCGGACCGAC GTTTCAGAACCACGTCCAAGGCACGGTCGGCCAGTTCAGAACACCGGCGGGCAGGGTCAACTACCTGATGACCAAGGCGC GCCTGGGCGCCGAAGCCACAGACCCCGAACGACGGCTCACGCAACATCTAGCGCCAGTACGCGAGGTGATTGAGGCCGAA GAGCTGGATTTCAGCCAGCTCCTTCAGCGCGATCTTGACGACCATCGCGTTGCAGTGAGCCTAGTCCCGTATCTGCTCAA CCCCGATTCCACTGGACCTGCGTTCTTTCCGCCGATCGTCGCTATCGCGTTGCCTTTCGAGCACCAGCACCCCTCAGAGT TTCCATCGCTCGATCTCGCTACAACCGTGTCTGATTCGGGTCTCTCATGGGCACAGCAAGATGCAGGGCAACACCTCCGC ACACGTCGGCTGCTTGGGGCGGATGGCAAAACGAATCCGGTCGCCCTAGGACAGCTGTGGTGGAATAAAGAGTTCTGTCG GATCGTCGTTATCGATGGCCAGCACCGCGCGATGGCGCTACTGGCCATCGATCGCACGCTCCGGTCTATGTGGCAAGACA GCGGCGGTGCACGCTATCGCTACTTCTATGAGACTCGCATTAAAGAGATAGTTAAGAGCCTCGGCAATGTTGCTCTCGAT GACATCGAAGTGCCGGTTAATGTGCTCTGGTTCCCGGACCTATTTGGACCAGACAAAGATCCGCATAAGGCGGCACGCAA GCTGTTTGTCGACGTGAACAAAGAGGCGCGCGCGCCGAGCGAATCCCGCCTGATCTTGTTGTCCGACGGTGAACTGGTTA ATATTCTCACTCGGACCTCATTGACCCAGCTACGCAACCAGGCGACTGACGAATTTCTTCCTCTTTACTGCATCGAGTAC GATAATCCGGATACTAAAACTACACAGTCCGCACGCTGGTCGGCTCTGACCAATATCCATGTCCTTAAGCAAATGGTCAC TAGGGTTATATTTGGACCTCCGAAGTACATCAATAAAGTCGATGTTACAATGGGCAAGCGCGAGCCGGAAGAAGAACGTA ATGCATTCATGCGAACACAGCTTGCCGTCGACAAGTTGTTTCCGCCAACGTTGCCGGGCGACGAACCGTTCTCCCGCGAT AAGTTGGGGAACCTAGCCTTTCCCGAGTCCGCTATCAGCACACTTGCGGACGCATACAAAGACACATGGAGTCGGGCACT TCTTATCCTCCTCAGCGAGACGTTGCCATTCAAAGCCCATGCCGACGCGCTCACCAAACTGAAGCAGAACTGGTTACCCG ACGAGGCTATTGCGATGCTGGCACACGACGCCCTCTTTAGCGGGGTGGGCATGTACTGGACTCTGCGGGATTCCGCCATC TACTACCAGGAGGAGCGTGCACTCCAGGGCGGAGCATCCACAAAGCCCGACGTGGTAAAAGCCTGGGACCTAATTGTGAA GAAGCAGGCTGAGTTTGAAGAGCTTCGCGCGCAGGAACTATTGGGAACCAAGTCTAAGCGGGAGAGCGCCAATCAGCTTT TTCAGGCAATTAATACCCATGCCTGCCAGCTAGGACTCGCGTTGACACTTGGAACTCTGCATAGGCTCGCGAGAGAAAGC GATGCCAGTGTCGTCGATATCGCACATTGCATGACGCGTGGGATCAACGCCTGGATGTTGAGTAAAATAACGGGCGACTA CGACCGACGACTAGCACTCGCAAAACGGCGCGACGATTTTCCGCGACACCCTCTTAACGTGATTGCCAATATGGACGCAC CTCGAGCGATTCAGTTCCGCTACTTCTGGCTTGAGATTCTTGGGTCGGAGCAAGCAGCACCTGAACTCGACGGTGTGATT TCAGGTTCGACGCTCAAGGCGCATCGCGACATCGCGAGAGGTGCATACATCGAGTATGTCGCCGGCGAGAAGGAGAAAGC GCTCAAGACTTCCGATCCAGGACTGAACGACGCTCAGCGTCGGAAACAGGCGAAGGAATCCGCGACGTCAGAATTGCGCA CGGCATTACTTCGCTGGTTCAGCATCAGCGCCGCCGACTGGGACGCATGGGTGGAAGCACAGGCGGACGCAGCAATCTCC ACGGATTCCGCTGATGAAGTTGACGCGGGCGAAGACGAACTTGAAGGTGAATCGGGGGACATCGAGGATGAAACGGAAGA ATCGGTTGAGCTCGAAGACCTAATTGGACCGGAATCGAGCTGA
Upstream 100 bases:
>100_bases CGCTCGAACGACTTGAGTGTTGGATTATGACGGCGCCACAACCGCCACCCGCCGACAGTGGGCCAACCACCAACCAGCGA TCGGTTGCCCAAGCCGCCGA
Downstream 100 bases:
>100_bases ATTGGTAGATTTCCATTCCTGAAGCAAGTGCTGTCGCGTCACTTCGCGTCAGTTCCGCTTAGCGCTTGTCTAAGCACAAG TCGATGCCCACGAACTGACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 760; Mature: 760
Protein sequence:
>760_residues MDCPANLPTHSRETVNMSLSQLGGGPTFQNHVQGTVGQFRTPAGRVNYLMTKARLGAEATDPERRLTQHLAPVREVIEAE ELDFSQLLQRDLDDHRVAVSLVPYLLNPDSTGPAFFPPIVAIALPFEHQHPSEFPSLDLATTVSDSGLSWAQQDAGQHLR TRRLLGADGKTNPVALGQLWWNKEFCRIVVIDGQHRAMALLAIDRTLRSMWQDSGGARYRYFYETRIKEIVKSLGNVALD DIEVPVNVLWFPDLFGPDKDPHKAARKLFVDVNKEARAPSESRLILLSDGELVNILTRTSLTQLRNQATDEFLPLYCIEY DNPDTKTTQSARWSALTNIHVLKQMVTRVIFGPPKYINKVDVTMGKREPEEERNAFMRTQLAVDKLFPPTLPGDEPFSRD KLGNLAFPESAISTLADAYKDTWSRALLILLSETLPFKAHADALTKLKQNWLPDEAIAMLAHDALFSGVGMYWTLRDSAI YYQEERALQGGASTKPDVVKAWDLIVKKQAEFEELRAQELLGTKSKRESANQLFQAINTHACQLGLALTLGTLHRLARES DASVVDIAHCMTRGINAWMLSKITGDYDRRLALAKRRDDFPRHPLNVIANMDAPRAIQFRYFWLEILGSEQAAPELDGVI SGSTLKAHRDIARGAYIEYVAGEKEKALKTSDPGLNDAQRRKQAKESATSELRTALLRWFSISAADWDAWVEAQADAAIS TDSADEVDAGEDELEGESGDIEDETEESVELEDLIGPESS
Sequences:
>Translated_760_residues MDCPANLPTHSRETVNMSLSQLGGGPTFQNHVQGTVGQFRTPAGRVNYLMTKARLGAEATDPERRLTQHLAPVREVIEAE ELDFSQLLQRDLDDHRVAVSLVPYLLNPDSTGPAFFPPIVAIALPFEHQHPSEFPSLDLATTVSDSGLSWAQQDAGQHLR TRRLLGADGKTNPVALGQLWWNKEFCRIVVIDGQHRAMALLAIDRTLRSMWQDSGGARYRYFYETRIKEIVKSLGNVALD DIEVPVNVLWFPDLFGPDKDPHKAARKLFVDVNKEARAPSESRLILLSDGELVNILTRTSLTQLRNQATDEFLPLYCIEY DNPDTKTTQSARWSALTNIHVLKQMVTRVIFGPPKYINKVDVTMGKREPEEERNAFMRTQLAVDKLFPPTLPGDEPFSRD KLGNLAFPESAISTLADAYKDTWSRALLILLSETLPFKAHADALTKLKQNWLPDEAIAMLAHDALFSGVGMYWTLRDSAI YYQEERALQGGASTKPDVVKAWDLIVKKQAEFEELRAQELLGTKSKRESANQLFQAINTHACQLGLALTLGTLHRLARES DASVVDIAHCMTRGINAWMLSKITGDYDRRLALAKRRDDFPRHPLNVIANMDAPRAIQFRYFWLEILGSEQAAPELDGVI SGSTLKAHRDIARGAYIEYVAGEKEKALKTSDPGLNDAQRRKQAKESATSELRTALLRWFSISAADWDAWVEAQADAAIS TDSADEVDAGEDELEGESGDIEDETEESVELEDLIGPESS >Mature_760_residues MDCPANLPTHSRETVNMSLSQLGGGPTFQNHVQGTVGQFRTPAGRVNYLMTKARLGAEATDPERRLTQHLAPVREVIEAE ELDFSQLLQRDLDDHRVAVSLVPYLLNPDSTGPAFFPPIVAIALPFEHQHPSEFPSLDLATTVSDSGLSWAQQDAGQHLR TRRLLGADGKTNPVALGQLWWNKEFCRIVVIDGQHRAMALLAIDRTLRSMWQDSGGARYRYFYETRIKEIVKSLGNVALD DIEVPVNVLWFPDLFGPDKDPHKAARKLFVDVNKEARAPSESRLILLSDGELVNILTRTSLTQLRNQATDEFLPLYCIEY DNPDTKTTQSARWSALTNIHVLKQMVTRVIFGPPKYINKVDVTMGKREPEEERNAFMRTQLAVDKLFPPTLPGDEPFSRD KLGNLAFPESAISTLADAYKDTWSRALLILLSETLPFKAHADALTKLKQNWLPDEAIAMLAHDALFSGVGMYWTLRDSAI YYQEERALQGGASTKPDVVKAWDLIVKKQAEFEELRAQELLGTKSKRESANQLFQAINTHACQLGLALTLGTLHRLARES DASVVDIAHCMTRGINAWMLSKITGDYDRRLALAKRRDDFPRHPLNVIANMDAPRAIQFRYFWLEILGSEQAAPELDGVI SGSTLKAHRDIARGAYIEYVAGEKEKALKTSDPGLNDAQRRKQAKESATSELRTALLRWFSISAADWDAWVEAQADAAIS TDSADEVDAGEDELEGESGDIEDETEESVELEDLIGPESS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 84867; Mature: 84867
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDCPANLPTHSRETVNMSLSQLGGGPTFQNHVQGTVGQFRTPAGRVNYLMTKARLGAEAT CCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCC DPERRLTQHLAPVREVIEAEELDFSQLLQRDLDDHRVAVSLVPYLLNPDSTGPAFFPPIV CHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHH AIALPFEHQHPSEFPSLDLATTVSDSGLSWAQQDAGQHLRTRRLLGADGKTNPVALGQLW HEECCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHH WNKEFCRIVVIDGQHRAMALLAIDRTLRSMWQDSGGARYRYFYETRIKEIVKSLGNVALD CCCCEEEEEEEECCCCEEHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCEEC DIEVPVNVLWFPDLFGPDKDPHKAARKLFVDVNKEARAPSESRLILLSDGELVNILTRTS CCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCHHHCCCCCCCEEEEECCCEEHHHHHHH LTQLRNQATDEFLPLYCIEYDNPDTKTTQSARWSALTNIHVLKQMVTRVIFGPPKYINKV HHHHHHHCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCEE DVTMGKREPEEERNAFMRTQLAVDKLFPPTLPGDEPFSRDKLGNLAFPESAISTLADAYK EEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHH DTWSRALLILLSETLPFKAHADALTKLKQNWLPDEAIAMLAHDALFSGVGMYWTLRDSAI HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEECCEE YYQEERALQGGASTKPDVVKAWDLIVKKQAEFEELRAQELLGTKSKRESANQLFQAINTH EEHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH ACQLGLALTLGTLHRLARESDASVVDIAHCMTRGINAWMLSKITGDYDRRLALAKRRDDF HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHCCCC PRHPLNVIANMDAPRAIQFRYFWLEILGSEQAAPELDGVISGSTLKAHRDIARGAYIEYV CCCCHHHHCCCCCCCEEHHHEEEHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEE AGEKEKALKTSDPGLNDAQRRKQAKESATSELRTALLRWFSISAADWDAWVEAQADAAIS CCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEC TDSADEVDAGEDELEGESGDIEDETEESVELEDLIGPESS CCCCCCCCCCCHHCCCCCCCCCCCHHHCCCHHHHCCCCCC >Mature Secondary Structure MDCPANLPTHSRETVNMSLSQLGGGPTFQNHVQGTVGQFRTPAGRVNYLMTKARLGAEAT CCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCC DPERRLTQHLAPVREVIEAEELDFSQLLQRDLDDHRVAVSLVPYLLNPDSTGPAFFPPIV CHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHH AIALPFEHQHPSEFPSLDLATTVSDSGLSWAQQDAGQHLRTRRLLGADGKTNPVALGQLW HEECCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHH WNKEFCRIVVIDGQHRAMALLAIDRTLRSMWQDSGGARYRYFYETRIKEIVKSLGNVALD CCCCEEEEEEEECCCCEEHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCEEC DIEVPVNVLWFPDLFGPDKDPHKAARKLFVDVNKEARAPSESRLILLSDGELVNILTRTS CCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCHHHCCCCCCCEEEEECCCEEHHHHHHH LTQLRNQATDEFLPLYCIEYDNPDTKTTQSARWSALTNIHVLKQMVTRVIFGPPKYINKV HHHHHHHCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCEE DVTMGKREPEEERNAFMRTQLAVDKLFPPTLPGDEPFSRDKLGNLAFPESAISTLADAYK EEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHH DTWSRALLILLSETLPFKAHADALTKLKQNWLPDEAIAMLAHDALFSGVGMYWTLRDSAI HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEECCEE YYQEERALQGGASTKPDVVKAWDLIVKKQAEFEELRAQELLGTKSKRESANQLFQAINTH EEHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH ACQLGLALTLGTLHRLARESDASVVDIAHCMTRGINAWMLSKITGDYDRRLALAKRRDDF HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHCCCC PRHPLNVIANMDAPRAIQFRYFWLEILGSEQAAPELDGVISGSTLKAHRDIARGAYIEYV CCCCHHHHCCCCCCCEEHHHEEEHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEE AGEKEKALKTSDPGLNDAQRRKQAKESATSELRTALLRWFSISAADWDAWVEAQADAAIS CCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEC TDSADEVDAGEDELEGESGDIEDETEESVELEDLIGPESS CCCCCCCCCCCHHCCCCCCCCCCCHHHCCCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA