| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628188
Identifier: 169628188
GI number: 169628188
Start: 1105796
End: 1106938
Strand: Direct
Name: 169628188
Synonym: MAB_1094
Alternate gene names: NA
Gene position: 1105796-1106938 (Clockwise)
Preceding gene: 169628186
Following gene: 169628189
Centisome position: 21.82
GC content: 61.42
Gene sequence:
>1143_bases GTGACGCAGACTCACACCGACGCCCAGTCGCCCACCTCGCCAGTTCGCGCCCGCACGGGTGAATTCGAGTGGGCATTCCC CGCGATCCGCGGCGTCCAAGCTGGACGCGAGTACTACGTGACGATGTGCCCGCTACGGCTCATTCCCAGAATGTTCCTGT TCGATGAGGAAGAGTTGACTGCGGAGATGCGGGCACAGCGCACGCTGAATAAGGGCCGCGTGCCGGAGATCGCCCGGTAC ATCGTGGAGAACAGTGATAGCTACGTGTTCTCCGCGCTGACGGCGTCGGTGGACGTCGATGTGCGATTCGATCCGCTTGC CACGGATGGTCCAAGCGATCGGGTGGGCACGCTCGTAATTCCTATGTCAGCTCGCTTCGTGATCAACGATGGTCAGCACC GGCGCGCGGCCATCCAGCAAGCACTGGCAGAGAATCCTGCCCTGGGCGACGAGAGTATCGCGATCGTCTTGTTCCTCGAT ATTGGCCTGGAGCGCTGCCAGCAGATGTTCGCTGATCTCAACCGCTACGCGGTTCGTCCCGCGAAGTCGATCGGCGTGCT GTATGACCACCGGGACGAGATGTCCGCGCTGACGAGGCTTGTCGTGTTGCGCTCACCTTTCTTGCGTGATCTGACAGAGA TGGAGACGTCGAACCTCGCCCAGCGGTCGCGGAAGCTGTTCACGCTGTCAGCGCTACACGCCGCCACCAAGGCGCTTCTC GACGGTATCGAGGAGAGCAACTTCGAGCGTCGAGTCGATCTCGCTTCGAAGTACTGGGAACTGGTGATCGGTCAATTTCC TGAGTGGGACCAGGTTTTCAACCGCGAGATAACCGCGGGCGAAGTGCGCCGAGACTTCATTCATACGCACGGAATCGTGC TGCACGCCCTCGGCAAAGTGGGGAACAGTCTGCTGAGTCAGGGCAAAGGAGTCCGGTCTTGGTCGCCTGCCTTGAAGAAG CTGCGGGACGTGGACTGGCACCGCGCAAGCAGTACGTGGGAGGGCCGCGCCGTCATTGGCGGCCGTGTGTCGAAGAGCGC GGCCAACGTCCTGCTCACCACTGCGGCGATGCGCGCAGTTATGGGATTGCCGCTGCCGCCTGATGAGCAGCGTGCGGAAG ACGTATTTGGAGGAGGGAATTAA
Upstream 100 bases:
>100_bases CCAAGACCGTACGCGTAGGTTCTGACATGTGTTCGGAGAACCGCCGACGTCTGTTCGGATCACTTGTTCCGAACAACGCA CTATGGTAGGACAATGAGAG
Downstream 100 bases:
>100_bases GTGAAGCGAAGTCTGCCTATTACGCCGAAGCGGCGTTCGGCCTTTGATGAGTTGGGGTTTTCGGCGACCGTGGAGGCGGT CGTCCGTCAGGCGCAGGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: DGQHR Domain Protein; Bacteriophage Protein; Thiol Protease Domain-Containing Protein; DGQHR Domain-Containing Protein; DNA Thiolation Protein
Number of amino acids: Translated: 380; Mature: 379
Protein sequence:
>380_residues MTQTHTDAQSPTSPVRARTGEFEWAFPAIRGVQAGREYYVTMCPLRLIPRMFLFDEEELTAEMRAQRTLNKGRVPEIARY IVENSDSYVFSALTASVDVDVRFDPLATDGPSDRVGTLVIPMSARFVINDGQHRRAAIQQALAENPALGDESIAIVLFLD IGLERCQQMFADLNRYAVRPAKSIGVLYDHRDEMSALTRLVVLRSPFLRDLTEMETSNLAQRSRKLFTLSALHAATKALL DGIEESNFERRVDLASKYWELVIGQFPEWDQVFNREITAGEVRRDFIHTHGIVLHALGKVGNSLLSQGKGVRSWSPALKK LRDVDWHRASSTWEGRAVIGGRVSKSAANVLLTTAAMRAVMGLPLPPDEQRAEDVFGGGN
Sequences:
>Translated_380_residues MTQTHTDAQSPTSPVRARTGEFEWAFPAIRGVQAGREYYVTMCPLRLIPRMFLFDEEELTAEMRAQRTLNKGRVPEIARY IVENSDSYVFSALTASVDVDVRFDPLATDGPSDRVGTLVIPMSARFVINDGQHRRAAIQQALAENPALGDESIAIVLFLD IGLERCQQMFADLNRYAVRPAKSIGVLYDHRDEMSALTRLVVLRSPFLRDLTEMETSNLAQRSRKLFTLSALHAATKALL DGIEESNFERRVDLASKYWELVIGQFPEWDQVFNREITAGEVRRDFIHTHGIVLHALGKVGNSLLSQGKGVRSWSPALKK LRDVDWHRASSTWEGRAVIGGRVSKSAANVLLTTAAMRAVMGLPLPPDEQRAEDVFGGGN >Mature_379_residues TQTHTDAQSPTSPVRARTGEFEWAFPAIRGVQAGREYYVTMCPLRLIPRMFLFDEEELTAEMRAQRTLNKGRVPEIARYI VENSDSYVFSALTASVDVDVRFDPLATDGPSDRVGTLVIPMSARFVINDGQHRRAAIQQALAENPALGDESIAIVLFLDI GLERCQQMFADLNRYAVRPAKSIGVLYDHRDEMSALTRLVVLRSPFLRDLTEMETSNLAQRSRKLFTLSALHAATKALLD GIEESNFERRVDLASKYWELVIGQFPEWDQVFNREITAGEVRRDFIHTHGIVLHALGKVGNSLLSQGKGVRSWSPALKKL RDVDWHRASSTWEGRAVIGGRVSKSAANVLLTTAAMRAVMGLPLPPDEQRAEDVFGGGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42424; Mature: 42293
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQTHTDAQSPTSPVRARTGEFEWAFPAIRGVQAGREYYVTMCPLRLIPRMFLFDEEELT CCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHCCCCEEEEECHHHHHHHHHHCCHHHHH AEMRAQRTLNKGRVPEIARYIVENSDSYVFSALTASVDVDVRFDPLATDGPSDRVGTLVI HHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEEHHEEEEEEEECCCCCCCCCCCCCEEEE PMSARFVINDGQHRRAAIQQALAENPALGDESIAIVLFLDIGLERCQQMFADLNRYAVRP ECCEEEEECCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCC AKSIGVLYDHRDEMSALTRLVVLRSPFLRDLTEMETSNLAQRSRKLFTLSALHAATKALL HHHHCCEECCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DGIEESNFERRVDLASKYWELVIGQFPEWDQVFNREITAGEVRRDFIHTHGIVLHALGKV HHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH GNSLLSQGKGVRSWSPALKKLRDVDWHRASSTWEGRAVIGGRVSKSAANVLLTTAAMRAV HHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHH MGLPLPPDEQRAEDVFGGGN HCCCCCCCHHHHHHHCCCCC >Mature Secondary Structure TQTHTDAQSPTSPVRARTGEFEWAFPAIRGVQAGREYYVTMCPLRLIPRMFLFDEEELT CCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHCCCCEEEEECHHHHHHHHHHCCHHHHH AEMRAQRTLNKGRVPEIARYIVENSDSYVFSALTASVDVDVRFDPLATDGPSDRVGTLVI HHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEEHHEEEEEEEECCCCCCCCCCCCCEEEE PMSARFVINDGQHRRAAIQQALAENPALGDESIAIVLFLDIGLERCQQMFADLNRYAVRP ECCEEEEECCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCC AKSIGVLYDHRDEMSALTRLVVLRSPFLRDLTEMETSNLAQRSRKLFTLSALHAATKALL HHHHCCEECCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DGIEESNFERRVDLASKYWELVIGQFPEWDQVFNREITAGEVRRDFIHTHGIVLHALGKV HHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH GNSLLSQGKGVRSWSPALKKLRDVDWHRASSTWEGRAVIGGRVSKSAANVLLTTAAMRAV HHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHH MGLPLPPDEQRAEDVFGGGN HCCCCCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA