Definition Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence.
Accession NC_010397
Length 5,067,172

Click here to switch to the map view.

The map label for this gene is 169628188

Identifier: 169628188

GI number: 169628188

Start: 1105796

End: 1106938

Strand: Direct

Name: 169628188

Synonym: MAB_1094

Alternate gene names: NA

Gene position: 1105796-1106938 (Clockwise)

Preceding gene: 169628186

Following gene: 169628189

Centisome position: 21.82

GC content: 61.42

Gene sequence:

>1143_bases
GTGACGCAGACTCACACCGACGCCCAGTCGCCCACCTCGCCAGTTCGCGCCCGCACGGGTGAATTCGAGTGGGCATTCCC
CGCGATCCGCGGCGTCCAAGCTGGACGCGAGTACTACGTGACGATGTGCCCGCTACGGCTCATTCCCAGAATGTTCCTGT
TCGATGAGGAAGAGTTGACTGCGGAGATGCGGGCACAGCGCACGCTGAATAAGGGCCGCGTGCCGGAGATCGCCCGGTAC
ATCGTGGAGAACAGTGATAGCTACGTGTTCTCCGCGCTGACGGCGTCGGTGGACGTCGATGTGCGATTCGATCCGCTTGC
CACGGATGGTCCAAGCGATCGGGTGGGCACGCTCGTAATTCCTATGTCAGCTCGCTTCGTGATCAACGATGGTCAGCACC
GGCGCGCGGCCATCCAGCAAGCACTGGCAGAGAATCCTGCCCTGGGCGACGAGAGTATCGCGATCGTCTTGTTCCTCGAT
ATTGGCCTGGAGCGCTGCCAGCAGATGTTCGCTGATCTCAACCGCTACGCGGTTCGTCCCGCGAAGTCGATCGGCGTGCT
GTATGACCACCGGGACGAGATGTCCGCGCTGACGAGGCTTGTCGTGTTGCGCTCACCTTTCTTGCGTGATCTGACAGAGA
TGGAGACGTCGAACCTCGCCCAGCGGTCGCGGAAGCTGTTCACGCTGTCAGCGCTACACGCCGCCACCAAGGCGCTTCTC
GACGGTATCGAGGAGAGCAACTTCGAGCGTCGAGTCGATCTCGCTTCGAAGTACTGGGAACTGGTGATCGGTCAATTTCC
TGAGTGGGACCAGGTTTTCAACCGCGAGATAACCGCGGGCGAAGTGCGCCGAGACTTCATTCATACGCACGGAATCGTGC
TGCACGCCCTCGGCAAAGTGGGGAACAGTCTGCTGAGTCAGGGCAAAGGAGTCCGGTCTTGGTCGCCTGCCTTGAAGAAG
CTGCGGGACGTGGACTGGCACCGCGCAAGCAGTACGTGGGAGGGCCGCGCCGTCATTGGCGGCCGTGTGTCGAAGAGCGC
GGCCAACGTCCTGCTCACCACTGCGGCGATGCGCGCAGTTATGGGATTGCCGCTGCCGCCTGATGAGCAGCGTGCGGAAG
ACGTATTTGGAGGAGGGAATTAA

Upstream 100 bases:

>100_bases
CCAAGACCGTACGCGTAGGTTCTGACATGTGTTCGGAGAACCGCCGACGTCTGTTCGGATCACTTGTTCCGAACAACGCA
CTATGGTAGGACAATGAGAG

Downstream 100 bases:

>100_bases
GTGAAGCGAAGTCTGCCTATTACGCCGAAGCGGCGTTCGGCCTTTGATGAGTTGGGGTTTTCGGCGACCGTGGAGGCGGT
CGTCCGTCAGGCGCAGGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: DGQHR Domain Protein; Bacteriophage Protein; Thiol Protease Domain-Containing Protein; DGQHR Domain-Containing Protein; DNA Thiolation Protein

Number of amino acids: Translated: 380; Mature: 379

Protein sequence:

>380_residues
MTQTHTDAQSPTSPVRARTGEFEWAFPAIRGVQAGREYYVTMCPLRLIPRMFLFDEEELTAEMRAQRTLNKGRVPEIARY
IVENSDSYVFSALTASVDVDVRFDPLATDGPSDRVGTLVIPMSARFVINDGQHRRAAIQQALAENPALGDESIAIVLFLD
IGLERCQQMFADLNRYAVRPAKSIGVLYDHRDEMSALTRLVVLRSPFLRDLTEMETSNLAQRSRKLFTLSALHAATKALL
DGIEESNFERRVDLASKYWELVIGQFPEWDQVFNREITAGEVRRDFIHTHGIVLHALGKVGNSLLSQGKGVRSWSPALKK
LRDVDWHRASSTWEGRAVIGGRVSKSAANVLLTTAAMRAVMGLPLPPDEQRAEDVFGGGN

Sequences:

>Translated_380_residues
MTQTHTDAQSPTSPVRARTGEFEWAFPAIRGVQAGREYYVTMCPLRLIPRMFLFDEEELTAEMRAQRTLNKGRVPEIARY
IVENSDSYVFSALTASVDVDVRFDPLATDGPSDRVGTLVIPMSARFVINDGQHRRAAIQQALAENPALGDESIAIVLFLD
IGLERCQQMFADLNRYAVRPAKSIGVLYDHRDEMSALTRLVVLRSPFLRDLTEMETSNLAQRSRKLFTLSALHAATKALL
DGIEESNFERRVDLASKYWELVIGQFPEWDQVFNREITAGEVRRDFIHTHGIVLHALGKVGNSLLSQGKGVRSWSPALKK
LRDVDWHRASSTWEGRAVIGGRVSKSAANVLLTTAAMRAVMGLPLPPDEQRAEDVFGGGN
>Mature_379_residues
TQTHTDAQSPTSPVRARTGEFEWAFPAIRGVQAGREYYVTMCPLRLIPRMFLFDEEELTAEMRAQRTLNKGRVPEIARYI
VENSDSYVFSALTASVDVDVRFDPLATDGPSDRVGTLVIPMSARFVINDGQHRRAAIQQALAENPALGDESIAIVLFLDI
GLERCQQMFADLNRYAVRPAKSIGVLYDHRDEMSALTRLVVLRSPFLRDLTEMETSNLAQRSRKLFTLSALHAATKALLD
GIEESNFERRVDLASKYWELVIGQFPEWDQVFNREITAGEVRRDFIHTHGIVLHALGKVGNSLLSQGKGVRSWSPALKKL
RDVDWHRASSTWEGRAVIGGRVSKSAANVLLTTAAMRAVMGLPLPPDEQRAEDVFGGGN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42424; Mature: 42293

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQTHTDAQSPTSPVRARTGEFEWAFPAIRGVQAGREYYVTMCPLRLIPRMFLFDEEELT
CCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHCCCCEEEEECHHHHHHHHHHCCHHHHH
AEMRAQRTLNKGRVPEIARYIVENSDSYVFSALTASVDVDVRFDPLATDGPSDRVGTLVI
HHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEEHHEEEEEEEECCCCCCCCCCCCCEEEE
PMSARFVINDGQHRRAAIQQALAENPALGDESIAIVLFLDIGLERCQQMFADLNRYAVRP
ECCEEEEECCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCC
AKSIGVLYDHRDEMSALTRLVVLRSPFLRDLTEMETSNLAQRSRKLFTLSALHAATKALL
HHHHCCEECCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DGIEESNFERRVDLASKYWELVIGQFPEWDQVFNREITAGEVRRDFIHTHGIVLHALGKV
HHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
GNSLLSQGKGVRSWSPALKKLRDVDWHRASSTWEGRAVIGGRVSKSAANVLLTTAAMRAV
HHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHH
MGLPLPPDEQRAEDVFGGGN
HCCCCCCCHHHHHHHCCCCC
>Mature Secondary Structure 
TQTHTDAQSPTSPVRARTGEFEWAFPAIRGVQAGREYYVTMCPLRLIPRMFLFDEEELT
CCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHCCCCEEEEECHHHHHHHHHHCCHHHHH
AEMRAQRTLNKGRVPEIARYIVENSDSYVFSALTASVDVDVRFDPLATDGPSDRVGTLVI
HHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEEHHEEEEEEEECCCCCCCCCCCCCEEEE
PMSARFVINDGQHRRAAIQQALAENPALGDESIAIVLFLDIGLERCQQMFADLNRYAVRP
ECCEEEEECCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCC
AKSIGVLYDHRDEMSALTRLVVLRSPFLRDLTEMETSNLAQRSRKLFTLSALHAATKALL
HHHHCCEECCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DGIEESNFERRVDLASKYWELVIGQFPEWDQVFNREITAGEVRRDFIHTHGIVLHALGKV
HHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
GNSLLSQGKGVRSWSPALKKLRDVDWHRASSTWEGRAVIGGRVSKSAANVLLTTAAMRAV
HHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHH
MGLPLPPDEQRAEDVFGGGN
HCCCCCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA