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The map label for this gene is ygfA [H]

Identifier: 169628180

GI number: 169628180

Start: 1097703

End: 1098266

Strand: Reverse

Name: ygfA [H]

Synonym: MAB_1085c

Alternate gene names: 169628180

Gene position: 1098266-1097703 (Counterclockwise)

Preceding gene: 169628187

Following gene: 169628179

Centisome position: 21.67

GC content: 69.15

Gene sequence:

>564_bases
GTGCAGGCACGACGGGCGATATCGCCTGCTGAGCGCGAAAAGCAAAACGATGCGCTCGCCGCGCATGTCCTCACCGCGGT
CTCAGGGCTTTCCGTGATCGCCGCCTACCTGCCGGTGGGGTCCGAACCCGGATCGGTGCGGATGCTCGACGCCCTGCTGG
ACCGCGGGGTACGGATTCTGCTGCCCATCGCCCGCAATGACGAGGCAGGCATCCCCATGGCGCTGCGCTGGGGGTACTAC
GCGCGGGAAGAACTGGTCGATGCCCCTTTCGGTCTACGGGAACCCGCCAACCCGGTGGCCGGTTCGGCCGCCGCCCTCGC
CGAGGCTCAGCTTGTGCTGGTCCCGGCGCTCGCGGTGGACAAGCAGGGCAACCGGTTGGGGCGGGGCGCCGGCTTCTACG
ACCGCTCCCTGGGCTTCGCCGCGCGGGCGACGCCCCTGGTCACGCCGCTATTTGTCGGCGAGATACGCGATGAGCTCCCG
GCGGGACCACATGATGTCCCGATCACCCATGCGATCACGGCGGACGGATTGGTCACACTCGGCGCGGGGACGTGGCAGAC
CTAG

Upstream 100 bases:

>100_bases
ACTCACCCTAACCACTGACCCGGGAATTCCGCTGGCAAGGCGGTAGCGTCACGGAATCGGCACTTCTCAGAACATCAAGG
AAGCCCTGCGGCAACAGATT

Downstream 100 bases:

>100_bases
CACTCCAAGCGGTAGAGTGCTAGTGGCGTTTCACGGCTTGCCAGTTTCGGAGGACCCCCATGCCCACCTATTCCTATGCA
TGTGCCGACTGTGGCGACAA

Product: 5-formyltetrahydrofolate cyclo-ligase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MQARRAISPAEREKQNDALAAHVLTAVSGLSVIAAYLPVGSEPGSVRMLDALLDRGVRILLPIARNDEAGIPMALRWGYY
AREELVDAPFGLREPANPVAGSAAALAEAQLVLVPALAVDKQGNRLGRGAGFYDRSLGFAARATPLVTPLFVGEIRDELP
AGPHDVPITHAITADGLVTLGAGTWQT

Sequences:

>Translated_187_residues
MQARRAISPAEREKQNDALAAHVLTAVSGLSVIAAYLPVGSEPGSVRMLDALLDRGVRILLPIARNDEAGIPMALRWGYY
AREELVDAPFGLREPANPVAGSAAALAEAQLVLVPALAVDKQGNRLGRGAGFYDRSLGFAARATPLVTPLFVGEIRDELP
AGPHDVPITHAITADGLVTLGAGTWQT
>Mature_187_residues
MQARRAISPAEREKQNDALAAHVLTAVSGLSVIAAYLPVGSEPGSVRMLDALLDRGVRILLPIARNDEAGIPMALRWGYY
AREELVDAPFGLREPANPVAGSAAALAEAQLVLVPALAVDKQGNRLGRGAGFYDRSLGFAARATPLVTPLFVGEIRDELP
AGPHDVPITHAITADGLVTLGAGTWQT

Specific function: Unknown

COG id: COG0212

COG function: function code H; 5-formyltetrahydrofolate cyclo-ligase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 5-formyltetrahydrofolate cyclo-ligase family [H]

Homologues:

Organism=Escherichia coli, GI1789278, Length=175, Percent_Identity=27.4285714285714, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002698 [H]

Pfam domain/function: PF01812 5-FTHF_cyc-lig [H]

EC number: NA

Molecular weight: Translated: 19650; Mature: 19650

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQARRAISPAEREKQNDALAAHVLTAVSGLSVIAAYLPVGSEPGSVRMLDALLDRGVRIL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEE
LPIARNDEAGIPMALRWGYYAREELVDAPFGLREPANPVAGSAAALAEAQLVLVPALAVD
EEEECCCCCCCCEEEECCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCEEEEEEHHHCC
KQGNRLGRGAGFYDRSLGFAARATPLVTPLFVGEIRDELPAGPHDVPITHAITADGLVTL
CCCCCCCCCCCCCHHCCCCHHCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEE
GAGTWQT
CCCCCCC
>Mature Secondary Structure
MQARRAISPAEREKQNDALAAHVLTAVSGLSVIAAYLPVGSEPGSVRMLDALLDRGVRIL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEE
LPIARNDEAGIPMALRWGYYAREELVDAPFGLREPANPVAGSAAALAEAQLVLVPALAVD
EEEECCCCCCCCEEEECCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCEEEEEEHHHCC
KQGNRLGRGAGFYDRSLGFAARATPLVTPLFVGEIRDELPAGPHDVPITHAITADGLVTL
CCCCCCCCCCCCCHHCCCCHHCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEE
GAGTWQT
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]