| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628157
Identifier: 169628157
GI number: 169628157
Start: 1071976
End: 1073307
Strand: Direct
Name: 169628157
Synonym: MAB_1062
Alternate gene names: NA
Gene position: 1071976-1073307 (Clockwise)
Preceding gene: 169628156
Following gene: 169628158
Centisome position: 21.16
GC content: 67.64
Gene sequence:
>1332_bases GTGAACCAACCCTCGCGCGCCAATCCCGCACAGGCTCGCGCACTGCTGACGGTCGCATTTGGGCCGTCAGCAGTTGCGTT GGTCATCATTGCGGCAATCGTTCTGGTGCAGTTGGTGATCGCCAACAGCGATATGACCGGGACGTTCGGTGCGGTGGCCA GTATGTGGCTGGGCACTCACTTGGTACCGATCTCCATCGGTGGTCGCGTCATCGAGGTACTGCCGCTCCTGCCCACGGCG GCGATGGTGTGGGGTGTCGCCCGGACGGTGGCCTCGGCCCTCGCCCCGACCACGTCCTGGTACGTGATCCGGTGGGTGAT CGCTTCGGCGCTGGCAGGCCCGCTGCTCATGACGGCCATATCGCTGGCGATCATCCATGACGCGTCGACGGTGCTGACGC AGCTGCAATCACCGAACGCTCTGCGCGCCTTCGGCTGCGTATTGGGTGTGCATGCGGTAGGTGCGGTCATCGGCGTCGTG ACGCGAGTCGGCAGGCGGATCGCGCTCGTTCTGCAGCTGCCGTCGTGGCCGATGGATGCCGCCCGTGGTGCCGTCGCCGG CGTGCTGGCGCTGTTCGGGCTCTCCGGGGCCGTCACGGCCGGCTCGCTGGTGGTCCACTGGGCGACGATGGATCAGCTGT ACTCGGTTACCAACGATTTTGTCGGTCAGCTCAGCTTGACCCTGTTGGCGATCCTGTACGCCCCCAATGTGATTCTCGGC TCCTGCGCACTGGCTGTGGGCTCCAGCGCGCACGTGGGGACCGCGACCTTCAGCGCTTTCGCGGTGTTCGGGGGGCAGCT GCCGGCGGTACCCATTCTGGCGGCGGTCCCCACCCCGCCGCTGGGGCCGGCCTGGGTCGCGCTGATGATCATCGGTGCGG TATCCGGGGTGGCCGTCGGTCAACAGTGCGCGCGCCATCCGGTGCCGTGGCCCACCGCGATCCACAAAGTGGTGACGGCG GCCCTGCTGGCCGCCACCTTCCTGGCGATCGTCGGCAAGCTGGCCGGCGGACAGCTCGGGAACTTCGGGCGTCTGGGTAT CGACCAGGGCACCTTTGGCCCCGGGGTGTTCTTCTGGTTCCTGGTCATCGGCTTGCTGACGGTGTTCATGCTGGGTGGGG CGACCCGCCTGCCCGCCAGGACGCGGCGCGATCCGGAACCCGCACCCGAGCCCGAGATGGATCCGGAACCCGCACCCGCA CCCGAGCCGGATCCGGAACCCGCACCTGAACCTGAACCACAGCGCGAGCCGGAACCCGAATCAGAACCCGAAGCCGACAC GGATGAGGGTCCCGAGATCGACCCCAGCGACCCTCCGGAATCGGCCAAGTGA
Upstream 100 bases:
>100_bases TGGTGACGATCTGTTCGGCACCTCGCGTCCCTCCAATTAAGACTGTGTTCACGGCTTGGATGAGCCGCTGGCGCGAAGAC CATCGGCTCCCGATCGGCGC
Downstream 100 bases:
>100_bases CCAGCCCGGCTACGCTCAGCGGCGTGTCGGTGCCCAGTCAGTCAGTCGAGATCGCGCCATCTGCTCCCGCGCGGGTCGTG GTCTTGGCCTCCGGTACCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 443; Mature: 443
Protein sequence:
>443_residues MNQPSRANPAQARALLTVAFGPSAVALVIIAAIVLVQLVIANSDMTGTFGAVASMWLGTHLVPISIGGRVIEVLPLLPTA AMVWGVARTVASALAPTTSWYVIRWVIASALAGPLLMTAISLAIIHDASTVLTQLQSPNALRAFGCVLGVHAVGAVIGVV TRVGRRIALVLQLPSWPMDAARGAVAGVLALFGLSGAVTAGSLVVHWATMDQLYSVTNDFVGQLSLTLLAILYAPNVILG SCALAVGSSAHVGTATFSAFAVFGGQLPAVPILAAVPTPPLGPAWVALMIIGAVSGVAVGQQCARHPVPWPTAIHKVVTA ALLAATFLAIVGKLAGGQLGNFGRLGIDQGTFGPGVFFWFLVIGLLTVFMLGGATRLPARTRRDPEPAPEPEMDPEPAPA PEPDPEPAPEPEPQREPEPESEPEADTDEGPEIDPSDPPESAK
Sequences:
>Translated_443_residues MNQPSRANPAQARALLTVAFGPSAVALVIIAAIVLVQLVIANSDMTGTFGAVASMWLGTHLVPISIGGRVIEVLPLLPTA AMVWGVARTVASALAPTTSWYVIRWVIASALAGPLLMTAISLAIIHDASTVLTQLQSPNALRAFGCVLGVHAVGAVIGVV TRVGRRIALVLQLPSWPMDAARGAVAGVLALFGLSGAVTAGSLVVHWATMDQLYSVTNDFVGQLSLTLLAILYAPNVILG SCALAVGSSAHVGTATFSAFAVFGGQLPAVPILAAVPTPPLGPAWVALMIIGAVSGVAVGQQCARHPVPWPTAIHKVVTA ALLAATFLAIVGKLAGGQLGNFGRLGIDQGTFGPGVFFWFLVIGLLTVFMLGGATRLPARTRRDPEPAPEPEMDPEPAPA PEPDPEPAPEPEPQREPEPESEPEADTDEGPEIDPSDPPESAK >Mature_443_residues MNQPSRANPAQARALLTVAFGPSAVALVIIAAIVLVQLVIANSDMTGTFGAVASMWLGTHLVPISIGGRVIEVLPLLPTA AMVWGVARTVASALAPTTSWYVIRWVIASALAGPLLMTAISLAIIHDASTVLTQLQSPNALRAFGCVLGVHAVGAVIGVV TRVGRRIALVLQLPSWPMDAARGAVAGVLALFGLSGAVTAGSLVVHWATMDQLYSVTNDFVGQLSLTLLAILYAPNVILG SCALAVGSSAHVGTATFSAFAVFGGQLPAVPILAAVPTPPLGPAWVALMIIGAVSGVAVGQQCARHPVPWPTAIHKVVTA ALLAATFLAIVGKLAGGQLGNFGRLGIDQGTFGPGVFFWFLVIGLLTVFMLGGATRLPARTRRDPEPAPEPEMDPEPAPA PEPDPEPAPEPEPQREPEPESEPEADTDEGPEIDPSDPPESAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45581; Mature: 45581
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQPSRANPAQARALLTVAFGPSAVALVIIAAIVLVQLVIANSDMTGTFGAVASMWLGTH CCCCCCCCHHHHHEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCE LVPISIGGRVIEVLPLLPTAAMVWGVARTVASALAPTTSWYVIRWVIASALAGPLLMTAI EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH SLAIIHDASTVLTQLQSPNALRAFGCVLGVHAVGAVIGVVTRVGRRIALVLQLPSWPMDA HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHH ARGAVAGVLALFGLSGAVTAGSLVVHWATMDQLYSVTNDFVGQLSLTLLAILYAPNVILG HHHHHHHHHHHHCCCCHHHHCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH SCALAVGSSAHVGTATFSAFAVFGGQLPAVPILAAVPTPPLGPAWVALMIIGAVSGVAVG HHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH QQCARHPVPWPTAIHKVVTAALLAATFLAIVGKLAGGQLGNFGRLGIDQGTFGPGVFFWF HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH LVIGLLTVFMLGGATRLPARTRRDPEPAPEPEMDPEPAPAPEPDPEPAPEPEPQREPEPE HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SEPEADTDEGPEIDPSDPPESAK CCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNQPSRANPAQARALLTVAFGPSAVALVIIAAIVLVQLVIANSDMTGTFGAVASMWLGTH CCCCCCCCHHHHHEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCE LVPISIGGRVIEVLPLLPTAAMVWGVARTVASALAPTTSWYVIRWVIASALAGPLLMTAI EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH SLAIIHDASTVLTQLQSPNALRAFGCVLGVHAVGAVIGVVTRVGRRIALVLQLPSWPMDA HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHH ARGAVAGVLALFGLSGAVTAGSLVVHWATMDQLYSVTNDFVGQLSLTLLAILYAPNVILG HHHHHHHHHHHHCCCCHHHHCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH SCALAVGSSAHVGTATFSAFAVFGGQLPAVPILAAVPTPPLGPAWVALMIIGAVSGVAVG HHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH QQCARHPVPWPTAIHKVVTAALLAATFLAIVGKLAGGQLGNFGRLGIDQGTFGPGVFFWF HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH LVIGLLTVFMLGGATRLPARTRRDPEPAPEPEMDPEPAPAPEPDPEPAPEPEPQREPEPE HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SEPEADTDEGPEIDPSDPPESAK CCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]