| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is 169628130
Identifier: 169628130
GI number: 169628130
Start: 1045205
End: 1046119
Strand: Reverse
Name: 169628130
Synonym: MAB_1035c
Alternate gene names: NA
Gene position: 1046119-1045205 (Counterclockwise)
Preceding gene: 169628137
Following gene: 169628129
Centisome position: 20.65
GC content: 63.17
Gene sequence:
>915_bases GTGACGGCTACCCTCAACAACGGCCCCGCTCGGACCCCCAATCGGGAGGAATACTCCGACCGGCTCCTCAAGGGCACGGT GCGGCGCTCATACCAGCCGATGGTGGATCTGGATTGGGACGCGCCGTTAGATCCGGACAAGTACTACCTGCCGCCCAAGG TCGTCTCGCTGTATGGCACCGAGGTGTGGAACCGCATGTCACGCGCGGAGCAGATCGAGCTGTCGCGGCACGAGATGGTG AATCTGCTCTCCACCGGCATCTGGTTCGAGAACATGCTCAACCAGGGCTTGCTGCGGGTGATGATGCACGCCAACCCCGT CAGCAGTGAGACGCTGTACTCGCTCGCCGAGATCGGTGACGAGACACGGCATATGACGATGTTTGCCAAGGCCATCGAAA AGACCGGCCTGCCCCCGTACCGGATGCCGTGGTATCAGCGGGTGATGGCCAACCTGCTACCTCTGGCGCTCAAGGGCCCG GTGCTCTGGGTCGCCGCCCTCATCGGCGAGGAAATCTTCGATGCCCTGCAGCGCGAGATCATGGACGACCCAGAGCTACA GCCACTTGTACAGCGGCTCATGCGGATTCACGTCACCGAGGAGGCCCGGCATATTCAGTTCGCGCGTGACGGCATTCGCC AGCGTCTGGACCGCACCCCCACCCGCGTCAAGGTCATCCTGCGACTGACCAACGGTCTGGGCGGACCGATCTTCCGGTAC CTGCTGACCAACAAGAAAATGTATGAGGCTGTCGGGCTTCCGGGCCGCGAGACCATGCGGCTGGCGCGCAGCAATCCGGC GTTCCAGGAAGCCTCGCAGACCGGCTTCGCGCCGCTGTACAAATTCCTCGAGGAAACCGGCCTGATGGGCCGGTTGTCCC GGCGAATGTGGCGCAGAACGGGTTTCGTCGCGTGA
Upstream 100 bases:
>100_bases TTTCATTCGCCACGACAATTACGTGGCACTTCGCGTCCCACTTGACGCCTTCAACCTGCAACGTTTACGTTTGACATCTT AACGGAAAGGACTGTCAACG
Downstream 100 bases:
>100_bases GCGAGCACGGCACGGACGACGACATTTTCGACGGGACGGCCGTCATCACCGCGGGCGAGTTCACCACCGAATCGCGGGTG CGGCTGATCGGCTTCTTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MTATLNNGPARTPNREEYSDRLLKGTVRRSYQPMVDLDWDAPLDPDKYYLPPKVVSLYGTEVWNRMSRAEQIELSRHEMV NLLSTGIWFENMLNQGLLRVMMHANPVSSETLYSLAEIGDETRHMTMFAKAIEKTGLPPYRMPWYQRVMANLLPLALKGP VLWVAALIGEEIFDALQREIMDDPELQPLVQRLMRIHVTEEARHIQFARDGIRQRLDRTPTRVKVILRLTNGLGGPIFRY LLTNKKMYEAVGLPGRETMRLARSNPAFQEASQTGFAPLYKFLEETGLMGRLSRRMWRRTGFVA
Sequences:
>Translated_304_residues MTATLNNGPARTPNREEYSDRLLKGTVRRSYQPMVDLDWDAPLDPDKYYLPPKVVSLYGTEVWNRMSRAEQIELSRHEMV NLLSTGIWFENMLNQGLLRVMMHANPVSSETLYSLAEIGDETRHMTMFAKAIEKTGLPPYRMPWYQRVMANLLPLALKGP VLWVAALIGEEIFDALQREIMDDPELQPLVQRLMRIHVTEEARHIQFARDGIRQRLDRTPTRVKVILRLTNGLGGPIFRY LLTNKKMYEAVGLPGRETMRLARSNPAFQEASQTGFAPLYKFLEETGLMGRLSRRMWRRTGFVA >Mature_303_residues TATLNNGPARTPNREEYSDRLLKGTVRRSYQPMVDLDWDAPLDPDKYYLPPKVVSLYGTEVWNRMSRAEQIELSRHEMVN LLSTGIWFENMLNQGLLRVMMHANPVSSETLYSLAEIGDETRHMTMFAKAIEKTGLPPYRMPWYQRVMANLLPLALKGPV LWVAALIGEEIFDALQREIMDDPELQPLVQRLMRIHVTEEARHIQFARDGIRQRLDRTPTRVKVILRLTNGLGGPIFRYL LTNKKMYEAVGLPGRETMRLARSNPAFQEASQTGFAPLYKFLEETGLMGRLSRRMWRRTGFVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35123; Mature: 34992
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATLNNGPARTPNREEYSDRLLKGTVRRSYQPMVDLDWDAPLDPDKYYLPPKVVSLYGT CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCHHHHHHHHH EVWNRMSRAEQIELSRHEMVNLLSTGIWFENMLNQGLLRVMMHANPVSSETLYSLAEIGD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC ETRHMTMFAKAIEKTGLPPYRMPWYQRVMANLLPLALKGPVLWVAALIGEEIFDALQREI HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH MDDPELQPLVQRLMRIHVTEEARHIQFARDGIRQRLDRTPTRVKVILRLTNGLGGPIFRY CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHH LLTNKKMYEAVGLPGRETMRLARSNPAFQEASQTGFAPLYKFLEETGLMGRLSRRMWRRT HHHCCHHHHHHCCCCHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHH GFVA CCCC >Mature Secondary Structure TATLNNGPARTPNREEYSDRLLKGTVRRSYQPMVDLDWDAPLDPDKYYLPPKVVSLYGT CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCHHHHHHHHH EVWNRMSRAEQIELSRHEMVNLLSTGIWFENMLNQGLLRVMMHANPVSSETLYSLAEIGD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC ETRHMTMFAKAIEKTGLPPYRMPWYQRVMANLLPLALKGPVLWVAALIGEEIFDALQREI HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH MDDPELQPLVQRLMRIHVTEEARHIQFARDGIRQRLDRTPTRVKVILRLTNGLGGPIFRY CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHH LLTNKKMYEAVGLPGRETMRLARSNPAFQEASQTGFAPLYKFLEETGLMGRLSRRMWRRT HHHCCHHHHHHCCCCHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHH GFVA CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]