| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628122
Identifier: 169628122
GI number: 169628122
Start: 1037335
End: 1038324
Strand: Direct
Name: 169628122
Synonym: MAB_1027
Alternate gene names: NA
Gene position: 1037335-1038324 (Clockwise)
Preceding gene: 169628120
Following gene: 169628125
Centisome position: 20.47
GC content: 66.06
Gene sequence:
>990_bases ATGACGGTTGATTCCACCGGTCACGAGGGGGCCGCGCCGGAGCCAGACGACTGGCCGCCCGACGCACGTACGTTCACCAT CCGCGCCGCGGCGGACGACGCCGCGCCCAGTCTGGCCGCCGAACTACCCATTACCGCAACAGAACTCGGCATGCTGGATG GCGATGGCAACCATCCGGTGCAATTCTGCAGCGTCCTGCTGGAGCCCCCGGTCAAACACCGGTTCCAGGCTGCCGACGCG GATCGGTACGAACGCGAATACTGCGACCGGGACGACGACGGTGAATTCTTCATGGTTCATGTCGCGCTGTTGGGCCCGCG GCGCCCGGGAGTTTCCCTGGCGCCCGGTGCCCGGGACGTGCTGGTGGACGTCGCCTACGTCGTCGATCTGTCGTTGGAAG AGGACGGAGTGCTCAACCCCGCCAAGGTCGATTGGGCGGGTGGGGCGATCGTCGACGTCGCAGGTAACGCACCCACCGAA CACGTGGCATCGGCTCCGGCGGATCAGCCGACCGCCACTGCCCCCGCTGCCAGCCCGGCCGCCGCAACCCCGGAGCCGGG GAGTCCTGGCAGCTCCGAGTGGGTCCGTGAGCAGGTAGACGTGCGCATCGCGGTGCTGAGCCGTCTCGCCGGAGAGGTGG CCATTTCCGAGGTGCCGGTACCCACCGAGCTGGCCAAGGGGGAACGGCACTCGAACACCGCCCCGCAGTACGTGCTCGAT GGAGCCCAGTTCTGGTACCACACGCGTGATCCGAAAAAGGGTTTCGTGTGGAAGACGACGACCAATCCGAATGAGCTCAT CTATTGGTGCATCGACGATGTGGCCAGGGGACTGGCATGGCGGTGGACACAGCAGGCAGCCACCTACAAGACGATGCCCC CGGCGATGGCACAACGCACCCTGTGGGCGCCGTACTGGCAGCTGCTGATGAATGCGCTCGACACCAAATGGGGTGCCATT ACGGGCCGCAACATACGTGGCCTGCTGTGA
Upstream 100 bases:
>100_bases CCGAATTGCTCCCCCCAGCGGGGACGGTCTGTCGGTAAAACTAACAGGTCTGGGTGCACCATCGTCGCCCGAAGTTCACG ATTGCCATACGGTTAAGAAC
Downstream 100 bases:
>100_bases GCGTCACCAGCGGTAGTCGAGGAACTTTCCGTCGAAGGTCAGCACCACGCGATCGCCATCGGGGTCCGGCCGCCGCGTGA CGTCGACTTTGAAATTGATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MTVDSTGHEGAAPEPDDWPPDARTFTIRAAADDAAPSLAAELPITATELGMLDGDGNHPVQFCSVLLEPPVKHRFQAADA DRYEREYCDRDDDGEFFMVHVALLGPRRPGVSLAPGARDVLVDVAYVVDLSLEEDGVLNPAKVDWAGGAIVDVAGNAPTE HVASAPADQPTATAPAASPAAATPEPGSPGSSEWVREQVDVRIAVLSRLAGEVAISEVPVPTELAKGERHSNTAPQYVLD GAQFWYHTRDPKKGFVWKTTTNPNELIYWCIDDVARGLAWRWTQQAATYKTMPPAMAQRTLWAPYWQLLMNALDTKWGAI TGRNIRGLL
Sequences:
>Translated_329_residues MTVDSTGHEGAAPEPDDWPPDARTFTIRAAADDAAPSLAAELPITATELGMLDGDGNHPVQFCSVLLEPPVKHRFQAADA DRYEREYCDRDDDGEFFMVHVALLGPRRPGVSLAPGARDVLVDVAYVVDLSLEEDGVLNPAKVDWAGGAIVDVAGNAPTE HVASAPADQPTATAPAASPAAATPEPGSPGSSEWVREQVDVRIAVLSRLAGEVAISEVPVPTELAKGERHSNTAPQYVLD GAQFWYHTRDPKKGFVWKTTTNPNELIYWCIDDVARGLAWRWTQQAATYKTMPPAMAQRTLWAPYWQLLMNALDTKWGAI TGRNIRGLL >Mature_328_residues TVDSTGHEGAAPEPDDWPPDARTFTIRAAADDAAPSLAAELPITATELGMLDGDGNHPVQFCSVLLEPPVKHRFQAADAD RYEREYCDRDDDGEFFMVHVALLGPRRPGVSLAPGARDVLVDVAYVVDLSLEEDGVLNPAKVDWAGGAIVDVAGNAPTEH VASAPADQPTATAPAASPAAATPEPGSPGSSEWVREQVDVRIAVLSRLAGEVAISEVPVPTELAKGERHSNTAPQYVLDG AQFWYHTRDPKKGFVWKTTTNPNELIYWCIDDVARGLAWRWTQQAATYKTMPPAMAQRTLWAPYWQLLMNALDTKWGAIT GRNIRGLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35627; Mature: 35496
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVDSTGHEGAAPEPDDWPPDARTFTIRAAADDAAPSLAAELPITATELGMLDGDGNHPV CCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHCCCCCHHHHCCCCCCCCCHH QFCSVLLEPPVKHRFQAADADRYEREYCDRDDDGEFFMVHVALLGPRRPGVSLAPGARDV HHHHHHHCCCHHHHHHHCCHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCCCHHH LVDVAYVVDLSLEEDGVLNPAKVDWAGGAIVDVAGNAPTEHVASAPADQPTATAPAASPA HHEEEHHEEECCCCCCCCCCCEEECCCCEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCC AATPEPGSPGSSEWVREQVDVRIAVLSRLAGEVAISEVPVPTELAKGERHSNTAPQYVLD CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCEEEC GAQFWYHTRDPKKGFVWKTTTNPNELIYWCIDDVARGLAWRWTQQAATYKTMPPAMAQRT CHHEEEECCCCCCCEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH LWAPYWQLLMNALDTKWGAITGRNIRGLL HHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure TVDSTGHEGAAPEPDDWPPDARTFTIRAAADDAAPSLAAELPITATELGMLDGDGNHPV CCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHCCCCCHHHHCCCCCCCCCHH QFCSVLLEPPVKHRFQAADADRYEREYCDRDDDGEFFMVHVALLGPRRPGVSLAPGARDV HHHHHHHCCCHHHHHHHCCHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCCCHHH LVDVAYVVDLSLEEDGVLNPAKVDWAGGAIVDVAGNAPTEHVASAPADQPTATAPAASPA HHEEEHHEEECCCCCCCCCCCEEECCCCEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCC AATPEPGSPGSSEWVREQVDVRIAVLSRLAGEVAISEVPVPTELAKGERHSNTAPQYVLD CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCEEEC GAQFWYHTRDPKKGFVWKTTTNPNELIYWCIDDVARGLAWRWTQQAATYKTMPPAMAQRT CHHEEEECCCCCCCEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH LWAPYWQLLMNALDTKWGAITGRNIRGLL HHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA