| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is cpsE [H]
Identifier: 169628115
GI number: 169628115
Start: 1029595
End: 1031061
Strand: Direct
Name: cpsE [H]
Synonym: MAB_1020
Alternate gene names: 169628115
Gene position: 1029595-1031061 (Clockwise)
Preceding gene: 169628108
Following gene: 169628116
Centisome position: 20.32
GC content: 63.6
Gene sequence:
>1467_bases ATGGTTATCAAGAGCGTCGTTAATGACGAAATTCAACAGAGGGTAGAAAAGCGTCCAGGCGGGCTGTTCTACCTGCATCG ACGATGGGCGCCGGCGGCCGATTTGGTGGCCATCGTTCTCACCTCGCTGCTGTCCTACCAGCTGGCGCACCACCTGCTGT CGGGGCGGCAGGACCTCGGTGGCTGGTATGTGGCCACGGATGCGGTGATAGCTGTTGTGTGGTTTGCGGCGCTGTCGTTG CACACTGTGGGGCCGGGCAAGGCCCTGCGGGCGGTGCTCCAGGAATGGCAGACGGTGGTGGGCGTCACCTTCCAGTTATT CACCATCGTGCTGCTGACTTATCTGATTTCACGCATCGAGCTGATCGACATCCGCCATCTCATCATCGAGATACCGCTCG GGCTGGTGGGCATTTTCATTGCCCGGCACGTGCTGCGCCGTGTCTGGGGTTCGGAGGCTCGAACCTCGGTGCTACTGGCC GGTGATCACGATGCCGTCCGGGAGATGGTGACCGCGTTCGATCGTCATCGGGACAGTGGATTCGAGGTGGTGGGTGCATG CACTCCCGCGACCGATACGCGTTACGGTGCAACGGAAATCGAGGTTGGCGACCGTCGTGTTCCCGTCGTCGGTGATGACC GGAACGTGATTGAGGCGGCGCAGCGCACATCGGCGCAGATCGTCGCCGTCGCGATGACCAACGAGCTGGGACGTAAGGAA CTTGTCGGCCTTGCCTCCGATCTGGGGGATCTGGGAATCGAGCTCGCCGTCTCGCCGGGCGACGTCGATGAGACCGCCGT GACGACGGCCGATCGGGGCCTTGAGCGAGTGCACATGCTCGAGATGTTGGCCCCGGGGTATCGGCGGGCGCGGTCGATGT CCAAGGAAGCCTTTGACATGGTGTTCGCCACCGCGGCGATCCTGGCCACTGCGCCGGTGATGCTCGCCATCGCCGCGGCC ATCAAGCTCACCAGCACGGGCCCGGTGTTCTATGTGTCCGAACGAATCGGCTTGGACGGCGTGCCGTTTCGCATGATCAA GTTCCGCAGCATGTACACCGGTGCGGACCTGCAGACCGCCGGCATGATCGATTCGGCAGGCAGCACGCCCGTCTTCTTCA AGGCGAAGGAGGACCCGCGGGTGACCCCGGTCGGGGCCTTCATCCGCAAGTACAGCCTCGACGAGCTGCCGCAGTTCTTC AACGTGCTGTTCGGCGACATGAGCGTCGTCGGGCCTCGTCCGCAGGTGCAGCGGGAAGTCGACGCCTACGACGACACCAT GCGGCGGCGGCTCCTGGTGAAGCCCGGTGTCACGGGCCAGTGGCAGGTGAGCGGGCGCAACGACCTATCGGTTGACGAGT CCATCCGTCACGACATCTCCTATGTCGACAACTGGTCCATGGGCCTGGATATCCGGATCATCTCCCGGACCGTCGGCGCG GTGGTGCGCAGCGAGGGCGCGTACTGA
Upstream 100 bases:
>100_bases TCGAATCGCTATGGAAACGTAAGCGTGTAATTGGGTCGGGTTCTATTGCCGAAATCGTCCATACGTATCACCGATATGAA CGAACAGGTGAAGTGCACTT
Downstream 100 bases:
>100_bases CGACGGTCGGGGACGAAGGGCTGCGGTGGCAACCCGGTCAGGACCCGTGCGGGATATCCCGCTGGTGTCACGCTTTCACC GGATCCGTCGAGTGCATGAG
Product: undecaprenyl-phosphate galactosephosphotransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 488; Mature: 488
Protein sequence:
>488_residues MVIKSVVNDEIQQRVEKRPGGLFYLHRRWAPAADLVAIVLTSLLSYQLAHHLLSGRQDLGGWYVATDAVIAVVWFAALSL HTVGPGKALRAVLQEWQTVVGVTFQLFTIVLLTYLISRIELIDIRHLIIEIPLGLVGIFIARHVLRRVWGSEARTSVLLA GDHDAVREMVTAFDRHRDSGFEVVGACTPATDTRYGATEIEVGDRRVPVVGDDRNVIEAAQRTSAQIVAVAMTNELGRKE LVGLASDLGDLGIELAVSPGDVDETAVTTADRGLERVHMLEMLAPGYRRARSMSKEAFDMVFATAAILATAPVMLAIAAA IKLTSTGPVFYVSERIGLDGVPFRMIKFRSMYTGADLQTAGMIDSAGSTPVFFKAKEDPRVTPVGAFIRKYSLDELPQFF NVLFGDMSVVGPRPQVQREVDAYDDTMRRRLLVKPGVTGQWQVSGRNDLSVDESIRHDISYVDNWSMGLDIRIISRTVGA VVRSEGAY
Sequences:
>Translated_488_residues MVIKSVVNDEIQQRVEKRPGGLFYLHRRWAPAADLVAIVLTSLLSYQLAHHLLSGRQDLGGWYVATDAVIAVVWFAALSL HTVGPGKALRAVLQEWQTVVGVTFQLFTIVLLTYLISRIELIDIRHLIIEIPLGLVGIFIARHVLRRVWGSEARTSVLLA GDHDAVREMVTAFDRHRDSGFEVVGACTPATDTRYGATEIEVGDRRVPVVGDDRNVIEAAQRTSAQIVAVAMTNELGRKE LVGLASDLGDLGIELAVSPGDVDETAVTTADRGLERVHMLEMLAPGYRRARSMSKEAFDMVFATAAILATAPVMLAIAAA IKLTSTGPVFYVSERIGLDGVPFRMIKFRSMYTGADLQTAGMIDSAGSTPVFFKAKEDPRVTPVGAFIRKYSLDELPQFF NVLFGDMSVVGPRPQVQREVDAYDDTMRRRLLVKPGVTGQWQVSGRNDLSVDESIRHDISYVDNWSMGLDIRIISRTVGA VVRSEGAY >Mature_488_residues MVIKSVVNDEIQQRVEKRPGGLFYLHRRWAPAADLVAIVLTSLLSYQLAHHLLSGRQDLGGWYVATDAVIAVVWFAALSL HTVGPGKALRAVLQEWQTVVGVTFQLFTIVLLTYLISRIELIDIRHLIIEIPLGLVGIFIARHVLRRVWGSEARTSVLLA GDHDAVREMVTAFDRHRDSGFEVVGACTPATDTRYGATEIEVGDRRVPVVGDDRNVIEAAQRTSAQIVAVAMTNELGRKE LVGLASDLGDLGIELAVSPGDVDETAVTTADRGLERVHMLEMLAPGYRRARSMSKEAFDMVFATAAILATAPVMLAIAAA IKLTSTGPVFYVSERIGLDGVPFRMIKFRSMYTGADLQTAGMIDSAGSTPVFFKAKEDPRVTPVGAFIRKYSLDELPQFF NVLFGDMSVVGPRPQVQREVDAYDDTMRRRLLVKPGVTGQWQVSGRNDLSVDESIRHDISYVDNWSMGLDIRIISRTVGA VVRSEGAY
Specific function: Galactosyl transferase is essential for the assembly of the group B streptococci (GBS) type III capsular polysaccharide. May be involved in the formation of either or both galactosidic bonds by catalyzing the addition of galactose to an oligosaccharide pr
COG id: COG2148
COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial sugar transferase family [H]
Homologues:
Organism=Escherichia coli, GI1788360, Length=367, Percent_Identity=30.2452316076294, Blast_Score=144, Evalue=2e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003362 - InterPro: IPR017475 [H]
Pfam domain/function: PF02397 Bac_transf [H]
EC number: NA
Molecular weight: Translated: 53635; Mature: 53635
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVIKSVVNDEIQQRVEKRPGGLFYLHRRWAPAADLVAIVLTSLLSYQLAHHLLSGRQDLG CCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCC GWYVATDAVIAVVWFAALSLHTVGPGKALRAVLQEWQTVVGVTFQLFTIVLLTYLISRIE CEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIDIRHLIIEIPLGLVGIFIARHVLRRVWGSEARTSVLLAGDHDAVREMVTAFDRHRDSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHCCCCC FEVVGACTPATDTRYGATEIEVGDRRVPVVGDDRNVIEAAQRTSAQIVAVAMTNELGRKE CEEEEECCCCCCCCCCCEEEEECCEECCEECCCHHHHHHHHHCCCEEEEEEEHHHCCHHH LVGLASDLGDLGIELAVSPGDVDETAVTTADRGLERVHMLEMLAPGYRRARSMSKEAFDM HHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH VFATAAILATAPVMLAIAAAIKLTSTGPVFYVSERIGLDGVPFRMIKFRSMYTGADLQTA HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCC GMIDSAGSTPVFFKAKEDPRVTPVGAFIRKYSLDELPQFFNVLFGDMSVVGPRPQVQREV CCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHH DAYDDTMRRRLLVKPGVTGQWQVSGRNDLSVDESIRHDISYVDNWSMGLDIRIISRTVGA HHHHHHHHHHEEECCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEEHHHHHHH VVRSEGAY HHHCCCCC >Mature Secondary Structure MVIKSVVNDEIQQRVEKRPGGLFYLHRRWAPAADLVAIVLTSLLSYQLAHHLLSGRQDLG CCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCC GWYVATDAVIAVVWFAALSLHTVGPGKALRAVLQEWQTVVGVTFQLFTIVLLTYLISRIE CEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIDIRHLIIEIPLGLVGIFIARHVLRRVWGSEARTSVLLAGDHDAVREMVTAFDRHRDSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHCCCCC FEVVGACTPATDTRYGATEIEVGDRRVPVVGDDRNVIEAAQRTSAQIVAVAMTNELGRKE CEEEEECCCCCCCCCCCEEEEECCEECCEECCCHHHHHHHHHCCCEEEEEEEHHHCCHHH LVGLASDLGDLGIELAVSPGDVDETAVTTADRGLERVHMLEMLAPGYRRARSMSKEAFDM HHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH VFATAAILATAPVMLAIAAAIKLTSTGPVFYVSERIGLDGVPFRMIKFRSMYTGADLQTA HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCC GMIDSAGSTPVFFKAKEDPRVTPVGAFIRKYSLDELPQFFNVLFGDMSVVGPRPQVQREV CCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHH DAYDDTMRRRLLVKPGVTGQWQVSGRNDLSVDESIRHDISYVDNWSMGLDIRIISRTVGA HHHHHHHHHHEEECCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEEHHHHHHH VVRSEGAY HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8355611; 10913080; 11773119; 12354221 [H]