| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is 169628112
Identifier: 169628112
GI number: 169628112
Start: 1025281
End: 1026579
Strand: Reverse
Name: 169628112
Synonym: MAB_1017c
Alternate gene names: NA
Gene position: 1026579-1025281 (Counterclockwise)
Preceding gene: 169628113
Following gene: 169628111
Centisome position: 20.26
GC content: 65.59
Gene sequence:
>1299_bases GTGTCTAACGAACCTCGAAGTAGCACCACGCTGCCCCGGGCCCTGCGGCTGGCCCGCGATTTCGGGGCGGTCGTCTTCGG AAAGTACGGGCAGTATCTGGTCACCTTCGCGACGGTGCCACTGCTCGCGCGGGTGCTCGGCCCGGCGGGCATGGGGCTGC TGGCGGTCGGAATGGCCGCCTATTTCTTCGGCTCGATAGTCGTCGACTTGGGTATGACACCGTTTCTCGCCGCCCGCGTG CCCGAACTGCGCAATACCCCGGCCGAGCTTCAGCAGGTTCGCACCGACTACCTCACCGTGAGACTGATGACCCTCGGAGT CCTCGGCGCCGCACTCGGCGCCGGTTGGATCGCCGGGGTGCCTCCGTACGTGCACATGATTCTGCTGGGGCTCTTCACCG GTGGGTTCTGGGCCGCCTCCGACGACTGGCTCCTGATCGGGCAGGGACGCTTTATCGCATCGGCGATATACCAAGGTTCG GGGCGCATCACCTACCTGCTTCTGCTCGTCGTACTGCTTCCGCACTCCCCCCATGCGGCGACCGCCATCCTCTGTCTGCT GGGCTCCTCGATCCTCACGGTCGCAGGAACCTGGTGGGACAGCCTGCGGACATTCGGTTCGCTGTGTCGTCCGTACGCGC CAGGCCAAATCCTGCGCAGCAGTTGGCCGATCGTTACCTCACGACTGCTGACCACCGGCTACGGCCAGGGGGCGCCCGCC ATCTACTCGGCAATGCTGGACGCGGTGTCCCTGGGACTGTTCTCGGCCAGCGACCGCCTGGTCAGGGCGATGCAGTCGCT CTTGGACATGATCGGGTTGGTTCTGTTGCCGCGGATGGCGAAACGCAGTGGCCATGAGCACTTCTGGCGCAGCGGTTTTC AGGGCTTGCGGGGCGCCGTCGCGGTGGCCGTGCTTGCCGCGACACTACTGTGGGTGCTGGCTACCCCAATTGTCCACCTC ATCTTCGGCAGTGAATTCCTCGGAGCCGTTGGCCTTTTGCGTGCCGAACTACTCATTCTTCCGGCGAGCACCATCAGCTC ATACATCAGTACCGCGCTCCTACCCGTCCGCCAAGACACCCACGGCGTTCTCATCGCCGCGGTGGTCGGCACCACGGCAG CGATGGCCGGGCTGCTCGCCGCCTCGTGGACCCATTCGGTGTGGGCCCTCACGGGCGGTGTCATTGGCGCTGAATTCTGT GTGGCGCTGTGGTATTTGGCTCGGGTACGGCACCTTTCCGGGCGCGAGCGGGGCGCGGCGGCCACCGCTGAAACCGCGCA GGAAGAGGCTGCGCGATGA
Upstream 100 bases:
>100_bases CGCGCGCGGCGCTTCGACATCGCCGACTCGGCGCAGACGGTGGGGACGTTCCTCTCCGACATGCTGGCCCGGCGCTCAAC CACGCCACTGGCAGGGCGCC
Downstream 100 bases:
>100_bases AGATACTTTTTATCGGCGATGACTGGGTGGGCAGCAACGCACGCTCCATGGCCGACGGATTTCGGCAGGCCGGTCATGAG GTGATCGTGGTCGACACCAC
Product: MOP superfamily O-antigen transporter
Products: NA
Alternate protein names: Polysaccharide Biosynthesis Protein
Number of amino acids: Translated: 432; Mature: 431
Protein sequence:
>432_residues MSNEPRSSTTLPRALRLARDFGAVVFGKYGQYLVTFATVPLLARVLGPAGMGLLAVGMAAYFFGSIVVDLGMTPFLAARV PELRNTPAELQQVRTDYLTVRLMTLGVLGAALGAGWIAGVPPYVHMILLGLFTGGFWAASDDWLLIGQGRFIASAIYQGS GRITYLLLLVVLLPHSPHAATAILCLLGSSILTVAGTWWDSLRTFGSLCRPYAPGQILRSSWPIVTSRLLTTGYGQGAPA IYSAMLDAVSLGLFSASDRLVRAMQSLLDMIGLVLLPRMAKRSGHEHFWRSGFQGLRGAVAVAVLAATLLWVLATPIVHL IFGSEFLGAVGLLRAELLILPASTISSYISTALLPVRQDTHGVLIAAVVGTTAAMAGLLAASWTHSVWALTGGVIGAEFC VALWYLARVRHLSGRERGAAATAETAQEEAAR
Sequences:
>Translated_432_residues MSNEPRSSTTLPRALRLARDFGAVVFGKYGQYLVTFATVPLLARVLGPAGMGLLAVGMAAYFFGSIVVDLGMTPFLAARV PELRNTPAELQQVRTDYLTVRLMTLGVLGAALGAGWIAGVPPYVHMILLGLFTGGFWAASDDWLLIGQGRFIASAIYQGS GRITYLLLLVVLLPHSPHAATAILCLLGSSILTVAGTWWDSLRTFGSLCRPYAPGQILRSSWPIVTSRLLTTGYGQGAPA IYSAMLDAVSLGLFSASDRLVRAMQSLLDMIGLVLLPRMAKRSGHEHFWRSGFQGLRGAVAVAVLAATLLWVLATPIVHL IFGSEFLGAVGLLRAELLILPASTISSYISTALLPVRQDTHGVLIAAVVGTTAAMAGLLAASWTHSVWALTGGVIGAEFC VALWYLARVRHLSGRERGAAATAETAQEEAAR >Mature_431_residues SNEPRSSTTLPRALRLARDFGAVVFGKYGQYLVTFATVPLLARVLGPAGMGLLAVGMAAYFFGSIVVDLGMTPFLAARVP ELRNTPAELQQVRTDYLTVRLMTLGVLGAALGAGWIAGVPPYVHMILLGLFTGGFWAASDDWLLIGQGRFIASAIYQGSG RITYLLLLVVLLPHSPHAATAILCLLGSSILTVAGTWWDSLRTFGSLCRPYAPGQILRSSWPIVTSRLLTTGYGQGAPAI YSAMLDAVSLGLFSASDRLVRAMQSLLDMIGLVLLPRMAKRSGHEHFWRSGFQGLRGAVAVAVLAATLLWVLATPIVHLI FGSEFLGAVGLLRAELLILPASTISSYISTALLPVRQDTHGVLIAAVVGTTAAMAGLLAASWTHSVWALTGGVIGAEFCV ALWYLARVRHLSGRERGAAATAETAQEEAAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45854; Mature: 45723
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNEPRSSTTLPRALRLARDFGAVVFGKYGQYLVTFATVPLLARVLGPAGMGLLAVGMAA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH YFFGSIVVDLGMTPFLAARVPELRNTPAELQQVRTDYLTVRLMTLGVLGAALGAGWIAGV HHHHHHHHHHCCCHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PPYVHMILLGLFTGGFWAASDDWLLIGQGRFIASAIYQGSGRITYLLLLVVLLPHSPHAA CHHHHHHHHHHHHCCCEECCCCEEEEECCHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHH TAILCLLGSSILTVAGTWWDSLRTFGSLCRPYAPGQILRSSWPIVTSRLLTTGYGQGAPA HHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHCCCCCCCHH IYSAMLDAVSLGLFSASDRLVRAMQSLLDMIGLVLLPRMAKRSGHEHFWRSGFQGLRGAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH AVAVLAATLLWVLATPIVHLIFGSEFLGAVGLLRAELLILPASTISSYISTALLPVRQDT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC HGVLIAAVVGTTAAMAGLLAASWTHSVWALTGGVIGAEFCVALWYLARVRHLSGRERGAA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCH ATAETAQEEAAR HHHHHHHHHCCC >Mature Secondary Structure SNEPRSSTTLPRALRLARDFGAVVFGKYGQYLVTFATVPLLARVLGPAGMGLLAVGMAA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH YFFGSIVVDLGMTPFLAARVPELRNTPAELQQVRTDYLTVRLMTLGVLGAALGAGWIAGV HHHHHHHHHHCCCHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PPYVHMILLGLFTGGFWAASDDWLLIGQGRFIASAIYQGSGRITYLLLLVVLLPHSPHAA CHHHHHHHHHHHHCCCEECCCCEEEEECCHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHH TAILCLLGSSILTVAGTWWDSLRTFGSLCRPYAPGQILRSSWPIVTSRLLTTGYGQGAPA HHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHCCCCCCCHH IYSAMLDAVSLGLFSASDRLVRAMQSLLDMIGLVLLPRMAKRSGHEHFWRSGFQGLRGAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH AVAVLAATLLWVLATPIVHLIFGSEFLGAVGLLRAELLILPASTISSYISTALLPVRQDT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC HGVLIAAVVGTTAAMAGLLAASWTHSVWALTGGVIGAEFCVALWYLARVRHLSGRERGAA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCH ATAETAQEEAAR HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA