| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628103
Identifier: 169628103
GI number: 169628103
Start: 1014337
End: 1015383
Strand: Reverse
Name: 169628103
Synonym: MAB_1008c
Alternate gene names: NA
Gene position: 1015383-1014337 (Counterclockwise)
Preceding gene: 169628104
Following gene: 169628102
Centisome position: 20.04
GC content: 61.13
Gene sequence:
>1047_bases ATGGCTGAGCAATCACGATGGCAGAAAATCAAGAGCAGGCCGGTCGAGACCTATAACAAGACCTGGCTGGGGTTCATCGC TATCGCGGTGATCGGCGCCCTGGTGGGCGGAATGCTGCTGGTGAAGGCGATCGGTTTCGGCTACACCACCTACACCGCGG AGTTCGCGCAGGCCGCATCGCTGCGGGCGGGCCAGCCCATCACGGTAGCGGGCATTCCGATGGGAACGGTCACCAGCATG AAGCTGGTCGGCGATCACGTCGAGGCCAAGCTCTCGGTAAGCGATGACGTCAAACTGGGCAAGGACACCAAGGCCGCCAT CCGGGTGACCACCATCCTGGGATCGCGGTACCTGGACCTGCAGCCCGAGGGCCCCGGATCGTTGCCCAACAAGACCATCG ACCTGGCGCACACGGAAGTCCCCTACGACCTGCAGGCGACTCTCAGGGACGCGACGAACACCTTCGATCAGGTCGACTTC GACAAGGTGGCGCAATCGCTGAGCATCCTGGGCAAGCAGCTCGATGGGCTGCCCGAGGTGGTTCCGCAGGCCATGCAGAA TATCCAGACGCTCTCGCAGATCATCGCCGAACGGCGCGATCAGCTCGGCACACTCTTGAAGAGCTCCGAGAAAGTCACCA ACACCCTGCGCCACCAGCAGCAGGGCATCGGAACCCTGATCAACCAGGGACAGAACCTGATCGGTGAATTCGTGGTGCGC CGCGGCACCTTTCACGCCATGATGCAGTCGCTGACCAACCTGGTCCAACAACTCAGCAAGATCACCATCAAGGACCGCCC GCAGCTCGATGAGATGCTCAGAACCCTGCACCAACTCACCGACATGCTCGGCCAGCATGACGACCTGCTACGCAACATCC TGCAGATCACACCGGTCACGTTGCGTGGTGTCGCGAACGCCACGGGTACCGGCAACGCCATCGAGTTCAACGCACCCAAC GGTCTGGCGGTCGACTCCTGGATGTGCGCAATCAGTGGACGCGCCAAGCAATTCGGCATGATCCAATACTTCAAGGACTG CAAGTGA
Upstream 100 bases:
>100_bases GGCTTCTTCCCCGGGCTCAACGACGTGGTACCGATCATCGTCAACGCGGCCACGCCCGGCAACGTCGCCCAGCACACCCC ACGATGCAGGAATTTGGCCA
Downstream 100 bases:
>100_bases TGAACAGCAAGGGCGCTGGAAAAGGCAGAGCGATAGCCGTCATCGCAACCGTCGCGGCAGTGGCCGCGGCGATCGTGGGC GCGTGCGTCTACTACGTGAA
Product: putative MCE family protein
Products: NA
Alternate protein names: Mce Family Protein; Secreted Protein; MCE-Family C; MCE Family Protein; MCE-Family B; Mammalian Cell Entry Related Domain Protein; MCE-Family Protein; Mce Family C; Mce-Related Protein; Mce Family B; Mce-Family C; Mammalian Cell Entry-Like Domain-Containing Protein; MCE-Family D; Mce Family Protein Mce5C
Number of amino acids: Translated: 348; Mature: 347
Protein sequence:
>348_residues MAEQSRWQKIKSRPVETYNKTWLGFIAIAVIGALVGGMLLVKAIGFGYTTYTAEFAQAASLRAGQPITVAGIPMGTVTSM KLVGDHVEAKLSVSDDVKLGKDTKAAIRVTTILGSRYLDLQPEGPGSLPNKTIDLAHTEVPYDLQATLRDATNTFDQVDF DKVAQSLSILGKQLDGLPEVVPQAMQNIQTLSQIIAERRDQLGTLLKSSEKVTNTLRHQQQGIGTLINQGQNLIGEFVVR RGTFHAMMQSLTNLVQQLSKITIKDRPQLDEMLRTLHQLTDMLGQHDDLLRNILQITPVTLRGVANATGTGNAIEFNAPN GLAVDSWMCAISGRAKQFGMIQYFKDCK
Sequences:
>Translated_348_residues MAEQSRWQKIKSRPVETYNKTWLGFIAIAVIGALVGGMLLVKAIGFGYTTYTAEFAQAASLRAGQPITVAGIPMGTVTSM KLVGDHVEAKLSVSDDVKLGKDTKAAIRVTTILGSRYLDLQPEGPGSLPNKTIDLAHTEVPYDLQATLRDATNTFDQVDF DKVAQSLSILGKQLDGLPEVVPQAMQNIQTLSQIIAERRDQLGTLLKSSEKVTNTLRHQQQGIGTLINQGQNLIGEFVVR RGTFHAMMQSLTNLVQQLSKITIKDRPQLDEMLRTLHQLTDMLGQHDDLLRNILQITPVTLRGVANATGTGNAIEFNAPN GLAVDSWMCAISGRAKQFGMIQYFKDCK >Mature_347_residues AEQSRWQKIKSRPVETYNKTWLGFIAIAVIGALVGGMLLVKAIGFGYTTYTAEFAQAASLRAGQPITVAGIPMGTVTSMK LVGDHVEAKLSVSDDVKLGKDTKAAIRVTTILGSRYLDLQPEGPGSLPNKTIDLAHTEVPYDLQATLRDATNTFDQVDFD KVAQSLSILGKQLDGLPEVVPQAMQNIQTLSQIIAERRDQLGTLLKSSEKVTNTLRHQQQGIGTLINQGQNLIGEFVVRR GTFHAMMQSLTNLVQQLSKITIKDRPQLDEMLRTLHQLTDMLGQHDDLLRNILQITPVTLRGVANATGTGNAIEFNAPNG LAVDSWMCAISGRAKQFGMIQYFKDCK
Specific function: Unknown
COG id: COG1463
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38089; Mature: 37958
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEQSRWQKIKSRPVETYNKTWLGFIAIAVIGALVGGMLLVKAIGFGYTTYTAEFAQAAS CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH LRAGQPITVAGIPMGTVTSMKLVGDHVEAKLSVSDDVKLGKDTKAAIRVTTILGSRYLDL CCCCCCEEEECCCCCHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHCCCEEEC QPEGPGSLPNKTIDLAHTEVPYDLQATLRDATNTFDQVDFDKVAQSLSILGKQLDGLPEV CCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHH VPQAMQNIQTLSQIIAERRDQLGTLLKSSEKVTNTLRHQQQGIGTLINQGQNLIGEFVVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH RGTFHAMMQSLTNLVQQLSKITIKDRPQLDEMLRTLHQLTDMLGQHDDLLRNILQITPVT CCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHH LRGVANATGTGNAIEFNAPNGLAVDSWMCAISGRAKQFGMIQYFKDCK HHHCCCCCCCCCEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCC >Mature Secondary Structure AEQSRWQKIKSRPVETYNKTWLGFIAIAVIGALVGGMLLVKAIGFGYTTYTAEFAQAAS CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH LRAGQPITVAGIPMGTVTSMKLVGDHVEAKLSVSDDVKLGKDTKAAIRVTTILGSRYLDL CCCCCCEEEECCCCCHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHCCCEEEC QPEGPGSLPNKTIDLAHTEVPYDLQATLRDATNTFDQVDFDKVAQSLSILGKQLDGLPEV CCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHH VPQAMQNIQTLSQIIAERRDQLGTLLKSSEKVTNTLRHQQQGIGTLINQGQNLIGEFVVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH RGTFHAMMQSLTNLVQQLSKITIKDRPQLDEMLRTLHQLTDMLGQHDDLLRNILQITPVT CCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHH LRGVANATGTGNAIEFNAPNGLAVDSWMCAISGRAKQFGMIQYFKDCK HHHCCCCCCCCCEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA