| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is yerI [H]
Identifier: 169628048
GI number: 169628048
Start: 959678
End: 960694
Strand: Direct
Name: yerI [H]
Synonym: MAB_0951
Alternate gene names: 169628048
Gene position: 959678-960694 (Clockwise)
Preceding gene: 169628043
Following gene: 169628049
Centisome position: 18.94
GC content: 65.39
Gene sequence:
>1017_bases ATGCCGGGATTACCGCCGAATCACAGCGCGTTCGCGCGGGCCGCTCTGACGAGTTATGGCCGCGATCCGCACACACCGCT GCGGTTGTTGAGCCTTTCCGAGAACGCCACGTACCTGGTGGATGACCAGCGGCCCATGGTGTTGCGGGCGCACCGGCCCG GGTACCACTCGTTGCCCGCGATCCGCTCCGAGCTCGCCTGGATGAGTGCGCTTCGCGCCGAGACATCCGTCGTCACACCG GAACTCGTGCGGGCGCGGAACGGATCGGAAGTGATCGCCGTCGGTGTCGATGGGATCACCTTGCATGTCGACGCCATGGG TTTCGTCCCGGGCTGCACCGCCGAGGAAACGTCGGGCGTGGTCGGGTACGGCAAGCTCGGCCAACTGACCGCACACATGC ACCACCATGCTCAGGGCTGGCGGGTGCCACCGGGGTTCACCCGATTTCGCTGGGATCTGGACTCGATGTTCGGGCCGCAG GCGCGTTGGGGTGACTGGCGGCAGGCGCCCGGCCTGACCGACGCCGACCGGGAAGCAGTGGACGCCGCGGTACGGGACAT CATCCGGCGACTCAGCGAATATGGTTGCACTCCAGACCGATTCGGCCTGATACACGCCGACATGAGGTTGTCCAATCTCA TGGTCGACCCGGGCCGGCCCGGATCCGACATCACCGTCATCGACTTCGATGACTGTGGATGGTCTTGGTTCATGGCCGAT CTCGGTGCGGTGGTCTCCTGGGTGGAAGACACGCCTATGGCCGAGGCGGCCGTCGCGGATTGGCTCGATGGTTATCAGCG AGTGCGTCGGCTCTCCGGCGATGATCTGGGCATGATCCCGGCTTTCGTGATGCTGCGGCGGGTCATGCTCACGGCCTGGA TCGCCTCACACGCCGATGCCGATGCGGCGATCAGGGTCAGTGATGGCTTCGGTGCGCGTACCGCACGTCTGGCGGAGCGT TACCTGACCGACCGGACATGGTTGCGGGAGGCAGTTTTTGGTCGTCGAGTCGGCTGA
Upstream 100 bases:
>100_bases TTGGTTTCGGTGAAGTTTCAATCTGAGTCGTTTCGGTTCGTTGACGTTAAATGGTCCGATTTGGTCCGCTTAAGCGCGTC TTGTGGTGCACACTCAACCC
Downstream 100 bases:
>100_bases GCCGGCGGAGAGGAAAGTGATGTTCGATTTGTCTGCCCGGTCGGTGCTGGTGACCGGGGGAACCAAGGGAATTGGCCGCG GGATCGCGACGGTTTTTGCG
Product: putative aminoglycoside phosphotransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MPGLPPNHSAFARAALTSYGRDPHTPLRLLSLSENATYLVDDQRPMVLRAHRPGYHSLPAIRSELAWMSALRAETSVVTP ELVRARNGSEVIAVGVDGITLHVDAMGFVPGCTAEETSGVVGYGKLGQLTAHMHHHAQGWRVPPGFTRFRWDLDSMFGPQ ARWGDWRQAPGLTDADREAVDAAVRDIIRRLSEYGCTPDRFGLIHADMRLSNLMVDPGRPGSDITVIDFDDCGWSWFMAD LGAVVSWVEDTPMAEAAVADWLDGYQRVRRLSGDDLGMIPAFVMLRRVMLTAWIASHADADAAIRVSDGFGARTARLAER YLTDRTWLREAVFGRRVG
Sequences:
>Translated_338_residues MPGLPPNHSAFARAALTSYGRDPHTPLRLLSLSENATYLVDDQRPMVLRAHRPGYHSLPAIRSELAWMSALRAETSVVTP ELVRARNGSEVIAVGVDGITLHVDAMGFVPGCTAEETSGVVGYGKLGQLTAHMHHHAQGWRVPPGFTRFRWDLDSMFGPQ ARWGDWRQAPGLTDADREAVDAAVRDIIRRLSEYGCTPDRFGLIHADMRLSNLMVDPGRPGSDITVIDFDDCGWSWFMAD LGAVVSWVEDTPMAEAAVADWLDGYQRVRRLSGDDLGMIPAFVMLRRVMLTAWIASHADADAAIRVSDGFGARTARLAER YLTDRTWLREAVFGRRVG >Mature_337_residues PGLPPNHSAFARAALTSYGRDPHTPLRLLSLSENATYLVDDQRPMVLRAHRPGYHSLPAIRSELAWMSALRAETSVVTPE LVRARNGSEVIAVGVDGITLHVDAMGFVPGCTAEETSGVVGYGKLGQLTAHMHHHAQGWRVPPGFTRFRWDLDSMFGPQA RWGDWRQAPGLTDADREAVDAAVRDIIRRLSEYGCTPDRFGLIHADMRLSNLMVDPGRPGSDITVIDFDDCGWSWFMADL GAVVSWVEDTPMAEAAVADWLDGYQRVRRLSGDDLGMIPAFVMLRRVMLTAWIASHADADAAIRVSDGFGARTARLAERY LTDRTWLREAVFGRRVG
Specific function: Unknown
COG id: COG2334
COG function: function code R; Putative homoserine kinase type II (protein kinase fold)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pseudomonas-type thrB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002575 - InterPro: IPR011009 [H]
Pfam domain/function: PF01636 APH [H]
EC number: NA
Molecular weight: Translated: 37378; Mature: 37247
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: PS00109 PROTEIN_KINASE_TYR ; PS00300 SRP54
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGLPPNHSAFARAALTSYGRDPHTPLRLLSLSENATYLVDDQRPMVLRAHRPGYHSLPA CCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEECCCCEEEEECCCCCCCHHH IRSELAWMSALRAETSVVTPELVRARNGSEVIAVGVDGITLHVDAMGFVPGCTAEETSGV HHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEEEECCCEEEEEEEECCCCCCCCHHCCCC VGYGKLGQLTAHMHHHAQGWRVPPGFTRFRWDLDSMFGPQARWGDWRQAPGLTDADREAV CCCCHHHHHHHHHHHHCCCCCCCCCCCCEEECHHHHCCCCCCCCCCCCCCCCCCCHHHHH DAAVRDIIRRLSEYGCTPDRFGLIHADMRLSNLMVDPGRPGSDITVIDFDDCGWSWFMAD HHHHHHHHHHHHHCCCCCHHCCEEECCHHHHHEEECCCCCCCCEEEEEECCCCHHHHHHH LGAVVSWVEDTPMAEAAVADWLDGYQRVRRLSGDDLGMIPAFVMLRRVMLTAWIASHADA HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC DAAIRVSDGFGARTARLAERYLTDRTWLREAVFGRRVG CCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PGLPPNHSAFARAALTSYGRDPHTPLRLLSLSENATYLVDDQRPMVLRAHRPGYHSLPA CCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEECCCCEEEEECCCCCCCHHH IRSELAWMSALRAETSVVTPELVRARNGSEVIAVGVDGITLHVDAMGFVPGCTAEETSGV HHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEEEECCCEEEEEEEECCCCCCCCHHCCCC VGYGKLGQLTAHMHHHAQGWRVPPGFTRFRWDLDSMFGPQARWGDWRQAPGLTDADREAV CCCCHHHHHHHHHHHHCCCCCCCCCCCCEEECHHHHCCCCCCCCCCCCCCCCCCCHHHHH DAAVRDIIRRLSEYGCTPDRFGLIHADMRLSNLMVDPGRPGSDITVIDFDDCGWSWFMAD HHHHHHHHHHHHHCCCCCHHCCEEECCHHHHHEEECCCCCCCCEEEEEECCCCHHHHHHH LGAVVSWVEDTPMAEAAVADWLDGYQRVRRLSGDDLGMIPAFVMLRRVMLTAWIASHADA HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC DAAIRVSDGFGARTARLAERYLTDRTWLREAVFGRRVG CCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9701819; 9384377 [H]