| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628038
Identifier: 169628038
GI number: 169628038
Start: 947510
End: 948889
Strand: Direct
Name: 169628038
Synonym: MAB_0941
Alternate gene names: NA
Gene position: 947510-948889 (Clockwise)
Preceding gene: 169628037
Following gene: 169628039
Centisome position: 18.7
GC content: 65.65
Gene sequence:
>1380_bases ATGGCAACGCTGACGACCGGGGATCTCCGGAGGTTCTCGCGGGAGAAGCAGTTGGAGTTCGGTCGTGGACTGCGCGATGG CATGCCGCGGCGGCGCCTCGCGGAGCTCTCGGGTGAGCCGCGGCGAGATCCGATCGCCGAGCTTGCCGCACAGAACAAAT CCAGGATCCCGTCCCTTGTCCCGGTACGCCGGGAGCGCATGTCGGAGTCGCCGTTCGCCTTCTACCGTGGGGCGGCCGCG GTGATGGCGGCAGATCTTGCCGGCACCGCCACGACCGGGGTCCTGATTCAGATCTGCGGCGACGCTCATCTCTCCAATTT CGGCCTCTTCGCCTCACGTGAGCGCGCATTGTTGTTCGACGTCAACGATTTTGATGAAACCGCGGTGGGGCCGTGGGAAT GGGATGTCAAGCGTCTGGTCACCAGCATGGCGATCCTCGGCCACGATTTCGGGATGTCCGACGACGACGTGCGGCAGACG GCCACCAAGACGGCGGCCGCGTACCGCACCCGGATCAACGAGCTGGCCCAGATGTCTGCCCTGGAGCGCTTCTATCTCAA GACCACGGCACTCGAGGTGCTGGATCTGGTTTCCCGGCTCTCCAAGAGCGCCTCCAAATTGGCCACCGAGACGGTCTCGA AGGCCTCCAGGAACACTTCGCATCGGGCGTTACGCAAGCTCACCACCACCACTGTCGACGGTCACTACCGAATCGTGGAG CAGCAGGACATCGCGGTCCGCGTCCCGGAGATTGGCCTGTCCGAGGCGGCCGCGATGGTCGACGAGTACTTCGGCTCGGT GCCCGAGGATGTGGTCGCCCTGCTGGCCTGTCACCAGTTCCAGGACGCCGTGGTGCGGGTGGTCGGTGTCGGCAGCGTGG GCACGCGCTGCTATCTGGCGCTGCTCACCGATGCCGACGGTTCGCCGTTGTTCCTGCAGATGAAGGAGGCGTCCGCGTCG GTCGTCGAGGCGTATTTCCCCCAGGAACTGCGCTGGGAGCACGGGCGCCGGGTGGTGGCGGGCCAGCGCATCATGCAAGC CAGCGGTGACCCCTTCCTCGGGTACGTGACGTCCACCCGGCGAGGCAGCTTCTACGTCCGGCAGTTCCGGGACATGAAGG GCTCGGTGGACATCACCAGCCTCACCAATCCCGATGACCTGGCTCTCTACGGGTCACTCTGTGCCATCGCGCTTGCCCGT GCCCACGCCCAGTCAGGTGTTCCGGGTGTGATCGCGGGTTACCTGGGAGGTGGAACGGATCCCAACGCCGCCGACACCGC GTTCGCCGATTTCGCCGAGGCCTATTCGCGGCGCAATCGCGAGGACCATCAGCGGCTACTCGCGGCCACCGACGAGGAAT GGCTGCCGACATCCTCCTGA
Upstream 100 bases:
>100_bases TGTGGTGGTGGGAGTGATCGTCGCGGCATTGTTGGTGCCGGTGTTCGTGCGGTTCCGGACTTCCACTGAAGCCCAGCTCG ACCCGCAATAGATTCACCGT
Downstream 100 bases:
>100_bases TGTCCTAATTTGTGGGGTACCCGACCTGGACGTCATTGCCCAGGTGGCGAACACTGACAGACATGCGGCGTTCGGTGGTG ATTCTGGGGTTCCCCGGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 459; Mature: 458
Protein sequence:
>459_residues MATLTTGDLRRFSREKQLEFGRGLRDGMPRRRLAELSGEPRRDPIAELAAQNKSRIPSLVPVRRERMSESPFAFYRGAAA VMAADLAGTATTGVLIQICGDAHLSNFGLFASRERALLFDVNDFDETAVGPWEWDVKRLVTSMAILGHDFGMSDDDVRQT ATKTAAAYRTRINELAQMSALERFYLKTTALEVLDLVSRLSKSASKLATETVSKASRNTSHRALRKLTTTTVDGHYRIVE QQDIAVRVPEIGLSEAAAMVDEYFGSVPEDVVALLACHQFQDAVVRVVGVGSVGTRCYLALLTDADGSPLFLQMKEASAS VVEAYFPQELRWEHGRRVVAGQRIMQASGDPFLGYVTSTRRGSFYVRQFRDMKGSVDITSLTNPDDLALYGSLCAIALAR AHAQSGVPGVIAGYLGGGTDPNAADTAFADFAEAYSRRNREDHQRLLAATDEEWLPTSS
Sequences:
>Translated_459_residues MATLTTGDLRRFSREKQLEFGRGLRDGMPRRRLAELSGEPRRDPIAELAAQNKSRIPSLVPVRRERMSESPFAFYRGAAA VMAADLAGTATTGVLIQICGDAHLSNFGLFASRERALLFDVNDFDETAVGPWEWDVKRLVTSMAILGHDFGMSDDDVRQT ATKTAAAYRTRINELAQMSALERFYLKTTALEVLDLVSRLSKSASKLATETVSKASRNTSHRALRKLTTTTVDGHYRIVE QQDIAVRVPEIGLSEAAAMVDEYFGSVPEDVVALLACHQFQDAVVRVVGVGSVGTRCYLALLTDADGSPLFLQMKEASAS VVEAYFPQELRWEHGRRVVAGQRIMQASGDPFLGYVTSTRRGSFYVRQFRDMKGSVDITSLTNPDDLALYGSLCAIALAR AHAQSGVPGVIAGYLGGGTDPNAADTAFADFAEAYSRRNREDHQRLLAATDEEWLPTSS >Mature_458_residues ATLTTGDLRRFSREKQLEFGRGLRDGMPRRRLAELSGEPRRDPIAELAAQNKSRIPSLVPVRRERMSESPFAFYRGAAAV MAADLAGTATTGVLIQICGDAHLSNFGLFASRERALLFDVNDFDETAVGPWEWDVKRLVTSMAILGHDFGMSDDDVRQTA TKTAAAYRTRINELAQMSALERFYLKTTALEVLDLVSRLSKSASKLATETVSKASRNTSHRALRKLTTTTVDGHYRIVEQ QDIAVRVPEIGLSEAAAMVDEYFGSVPEDVVALLACHQFQDAVVRVVGVGSVGTRCYLALLTDADGSPLFLQMKEASASV VEAYFPQELRWEHGRRVVAGQRIMQASGDPFLGYVTSTRRGSFYVRQFRDMKGSVDITSLTNPDDLALYGSLCAIALARA HAQSGVPGVIAGYLGGGTDPNAADTAFADFAEAYSRRNREDHQRLLAATDEEWLPTSS
Specific function: Unknown
COG id: COG4320
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50300; Mature: 50169
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATLTTGDLRRFSREKQLEFGRGLRDGMPRRRLAELSGEPRRDPIAELAAQNKSRIPSLV CCCCCCHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHCCCCCCCHHHHHHHCHHHCCCCCC PVRRERMSESPFAFYRGAAAVMAADLAGTATTGVLIQICGDAHLSNFGLFASRERALLFD HHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHEEECCCCCCCCCCCEECCCCEEEEE VNDFDETAVGPWEWDVKRLVTSMAILGHDFGMSDDDVRQTATKTAAAYRTRINELAQMSA CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LERFYLKTTALEVLDLVSRLSKSASKLATETVSKASRNTSHRALRKLTTTTVDGHYRIVE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEECCCEEEEE QQDIAVRVPEIGLSEAAAMVDEYFGSVPEDVVALLACHQFQDAVVRVVGVGSVGTRCYLA CCCCEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE LLTDADGSPLFLQMKEASASVVEAYFPQELRWEHGRRVVAGQRIMQASGDPFLGYVTSTR EEECCCCCCEEEEEHHHHHHHHHHHCCHHHHHHHCCEEHHHHHHHHCCCCCEEEEEECCC RGSFYVRQFRDMKGSVDITSLTNPDDLALYGSLCAIALARAHAQSGVPGVIAGYLGGGTD CCCHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCC PNAADTAFADFAEAYSRRNREDHQRLLAATDEEWLPTSS CCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure ATLTTGDLRRFSREKQLEFGRGLRDGMPRRRLAELSGEPRRDPIAELAAQNKSRIPSLV CCCCCHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHCCCCCCCHHHHHHHCHHHCCCCCC PVRRERMSESPFAFYRGAAAVMAADLAGTATTGVLIQICGDAHLSNFGLFASRERALLFD HHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHEEECCCCCCCCCCCEECCCCEEEEE VNDFDETAVGPWEWDVKRLVTSMAILGHDFGMSDDDVRQTATKTAAAYRTRINELAQMSA CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LERFYLKTTALEVLDLVSRLSKSASKLATETVSKASRNTSHRALRKLTTTTVDGHYRIVE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEECCCEEEEE QQDIAVRVPEIGLSEAAAMVDEYFGSVPEDVVALLACHQFQDAVVRVVGVGSVGTRCYLA CCCCEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE LLTDADGSPLFLQMKEASASVVEAYFPQELRWEHGRRVVAGQRIMQASGDPFLGYVTSTR EEECCCCCCEEEEEHHHHHHHHHHHCCHHHHHHHCCEEHHHHHHHHCCCCCEEEEEECCC RGSFYVRQFRDMKGSVDITSLTNPDDLALYGSLCAIALARAHAQSGVPGVIAGYLGGGTD CCCHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCC PNAADTAFADFAEAYSRRNREDHQRLLAATDEEWLPTSS CCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA