| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628026
Identifier: 169628026
GI number: 169628026
Start: 921360
End: 922415
Strand: Direct
Name: 169628026
Synonym: MAB_0929
Alternate gene names: NA
Gene position: 921360-922415 (Clockwise)
Preceding gene: 169628024
Following gene: 169628027
Centisome position: 18.18
GC content: 64.2
Gene sequence:
>1056_bases ATGTCCCTCCGCGAGAAGTTGCGCGCGAAGAAGGAAGTGCGCGGCGACGCCAAGTACGTCCAGGTGCTGGAGACCCTGTC GCACGGATCGACGAACCGGAACTTCGATCCGTTCATCGACATCGACTGGGACTCGCCCGAGTACGCCGTCGTCCCCAATG ACACCCGCTGGGTGCTCCCGCATCGCACCGACCCGCTCGGCCGGCACCCCTGGTACCAGTCGCAGCCGCTGGAGAAGCAG ATCGAGATCGGGATGTGGCGCCAGGCCAACGTGGCCAAGGTGGGACTGCACTTCGAGAGCATCCTGATCCGTGGGCTCAT TCAGTACGCCTTCAGCGTGCCCAATGGCTCCCCGGAGTTCCGCTACCTGAACCACGAGTCCATCGAGGAGTGCAACCACA CCCTGATGTTCCAGGAGATGGTGAACCGCCTCGGTGTCGATGTTCCGGGTATGCCGCGCCTGCTGCGCTGGCTGTCGCCG TTCATTCCGCTGGCGTCGACCGTCGCGCCCGAGACCTTCTTCATCGGTGTGCTCGCCGGGGAAGAGCCCATCGACCACAC TCAGAAGAACGTGCTGCGCGAGGGTGACAACCTGCACCCGATCATGCGGCGCGTCATGGAGATCCACGTCGCCGAGGAGG CTCGGCACATCTCGTTCGCGCACGAGTACCTGCACAAGCGCGTCCCGACGATGCACTGGTTCAACCGTTTCGTGCTGTCC ATCAGCACCCCCATCATCATGCGGGTATTGATGGGCGCGATCATGACGCCGCCGCGCAGCTTCTTCAAGAAGTTCGGCAT CCCGGACGATGTCCGCAAGGAGATCTTCTGGAAGAGCCCGGCCTCTCGTCAGACGATGAGCGAGGTCTTCTCCGACGTCC GCATGCTGTGCCGTGGGGTGGGCATGATGAACCCCATCGCCAAGCTGGTGTGGCGAGTGCTGCACATCGACGGCCGTGCC GCCCGCTACCGCAGCGAGCCGCAGCGCGGCCCGCTGGTGAACTACGCGGCTCCTGAGGCCGCAGCGTCTGATTCACCCAG CGCTGTTCCCGCCTGA
Upstream 100 bases:
>100_bases CCTTCTCGCCCTGTTTACACTCGCCCAGAGCTTGTAGACTTCCAAGTAGCCCCAGAACGTAAAAGTTTGCAGGTCCGTTA CCTAATCAAAGGAGATAGGC
Downstream 100 bases:
>100_bases TGCCGCACGTCGTCACCCAGGCGTGCTGTAACGAGGGCTCCTGCGTTTACGCATGCCCGGTGAACTGCATCCACCCCACG CCTGACGAGCCTGATTTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 351; Mature: 350
Protein sequence:
>351_residues MSLREKLRAKKEVRGDAKYVQVLETLSHGSTNRNFDPFIDIDWDSPEYAVVPNDTRWVLPHRTDPLGRHPWYQSQPLEKQ IEIGMWRQANVAKVGLHFESILIRGLIQYAFSVPNGSPEFRYLNHESIEECNHTLMFQEMVNRLGVDVPGMPRLLRWLSP FIPLASTVAPETFFIGVLAGEEPIDHTQKNVLREGDNLHPIMRRVMEIHVAEEARHISFAHEYLHKRVPTMHWFNRFVLS ISTPIIMRVLMGAIMTPPRSFFKKFGIPDDVRKEIFWKSPASRQTMSEVFSDVRMLCRGVGMMNPIAKLVWRVLHIDGRA ARYRSEPQRGPLVNYAAPEAAASDSPSAVPA
Sequences:
>Translated_351_residues MSLREKLRAKKEVRGDAKYVQVLETLSHGSTNRNFDPFIDIDWDSPEYAVVPNDTRWVLPHRTDPLGRHPWYQSQPLEKQ IEIGMWRQANVAKVGLHFESILIRGLIQYAFSVPNGSPEFRYLNHESIEECNHTLMFQEMVNRLGVDVPGMPRLLRWLSP FIPLASTVAPETFFIGVLAGEEPIDHTQKNVLREGDNLHPIMRRVMEIHVAEEARHISFAHEYLHKRVPTMHWFNRFVLS ISTPIIMRVLMGAIMTPPRSFFKKFGIPDDVRKEIFWKSPASRQTMSEVFSDVRMLCRGVGMMNPIAKLVWRVLHIDGRA ARYRSEPQRGPLVNYAAPEAAASDSPSAVPA >Mature_350_residues SLREKLRAKKEVRGDAKYVQVLETLSHGSTNRNFDPFIDIDWDSPEYAVVPNDTRWVLPHRTDPLGRHPWYQSQPLEKQI EIGMWRQANVAKVGLHFESILIRGLIQYAFSVPNGSPEFRYLNHESIEECNHTLMFQEMVNRLGVDVPGMPRLLRWLSPF IPLASTVAPETFFIGVLAGEEPIDHTQKNVLREGDNLHPIMRRVMEIHVAEEARHISFAHEYLHKRVPTMHWFNRFVLSI STPIIMRVLMGAIMTPPRSFFKKFGIPDDVRKEIFWKSPASRQTMSEVFSDVRMLCRGVGMMNPIAKLVWRVLHIDGRAA RYRSEPQRGPLVNYAAPEAAASDSPSAVPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40340; Mature: 40209
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLREKLRAKKEVRGDAKYVQVLETLSHGSTNRNFDPFIDIDWDSPEYAVVPNDTRWVLP CCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCEEECCCCCEEECC HRTDPLGRHPWYQSQPLEKQIEIGMWRQANVAKVGLHFESILIRGLIQYAFSVPNGSPEF CCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE RYLNHESIEECNHTLMFQEMVNRLGVDVPGMPRLLRWLSPFIPLASTVAPETFFIGVLAG EECCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECC EEPIDHTQKNVLREGDNLHPIMRRVMEIHVAEEARHISFAHEYLHKRVPTMHWFNRFVLS CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH ISTPIIMRVLMGAIMTPPRSFFKKFGIPDDVRKEIFWKSPASRQTMSEVFSDVRMLCRGV HCCHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC GMMNPIAKLVWRVLHIDGRAARYRSEPQRGPLVNYAAPEAAASDSPSAVPA CCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure SLREKLRAKKEVRGDAKYVQVLETLSHGSTNRNFDPFIDIDWDSPEYAVVPNDTRWVLP CHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCEEECCCCCEEECC HRTDPLGRHPWYQSQPLEKQIEIGMWRQANVAKVGLHFESILIRGLIQYAFSVPNGSPEF CCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE RYLNHESIEECNHTLMFQEMVNRLGVDVPGMPRLLRWLSPFIPLASTVAPETFFIGVLAG EECCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECC EEPIDHTQKNVLREGDNLHPIMRRVMEIHVAEEARHISFAHEYLHKRVPTMHWFNRFVLS CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH ISTPIIMRVLMGAIMTPPRSFFKKFGIPDDVRKEIFWKSPASRQTMSEVFSDVRMLCRGV HCCHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC GMMNPIAKLVWRVLHIDGRAARYRSEPQRGPLVNYAAPEAAASDSPSAVPA CCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]