| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is serC [H]
Identifier: 169628025
GI number: 169628025
Start: 920044
End: 921159
Strand: Reverse
Name: serC [H]
Synonym: MAB_0928c
Alternate gene names: 169628025
Gene position: 921159-920044 (Counterclockwise)
Preceding gene: 169628028
Following gene: 169628022
Centisome position: 18.18
GC content: 67.38
Gene sequence:
>1116_bases GTGGCTGAATTGACCATCCCCGCTGACCTACTGCCCGCCGACGGACGCTTTGGCTGCGGCCCCTCCAAGGTGCGCCCCGA ACAGCTGCAATCGCTCGTGACTGCCGGCGCTTCCCTTTTCGGTACCTCGCACCGGCAAGCACCCGTCAAGAACCTCGTGG GCCGCGTCCGCGAGGGCCTCAAGGAGCTGTTCTCCGCTCCCGACGGCTACGAGGTGATCCTCGGCAACGGCGGCTCCACG CTGTTCTGGGATGCCGCCGCGTTCGGCCTGATCCGCGAGAAGTCGCTGCATCTGACGTTCGGTGAATTCAGCGCGAAGTT CGCCTCCTGCGTGGCCAAGAACCCGTTCGTCGGTGATCCCATCAAGGTGGTCGCGGACCCGGGCAGCGCGCCCGCCCCCG TCTCGGACCCGTCCGCCGATGTGATCGCCTGGGCCCACAACGAAACCTCGACCGGTGTCATGGTTCCGGTGCGACGTCCC GCCGGGTCGGAGAACGCACTGGTACTCATCGATGCCACCTCCGGCGCCGGCGGCCTGCCCGTCGACCTGTCGGAGGTGGA CGCGTACTACTTCGCGCCGCAGAAGAACTTCGCCGGCGACGGCGGGCTGTGGGTGTCCCTGATGAGCCCCGCCGCCCTGG AACGGGTGGAGGAGATCGGCGGCAGTGGACGCTGGGTGCCGGACATCCTGTCACTACCGATCGCGGTGGAGAACAGCCTG AAGAACCAGACCTACAACACCCCCGCGATCGGGACCTTGCTGCTGCTGGCCGACCAGATCGACTGGCTGCTGGCCGGCGG CGGCCTGGACTGGGCCACCAAGCGCACCGCCGATTCGGCCTCGCGGCTGTACTCCTGGGCCGAGGCGACGTCGTACACCA CGCCGTTCGTTGCGGATCCGGCGCAGCGTTCACAGGTGGTGGGCACCATCGACTTCAACGACGATGTAGATGCGGCCGCA GTTGCCAAGGTGCTGCGCGCCAACGGCGTGGTGGACACTGAGCCCTATCGCAAGCTGGGCCGCAACCAGCTGCGGGTGGC CATGTTCGCGGCCATCGATCCCGAGGACATCTCCAAGCTGACCCAGTGCGTCGACTGGGTCGTCGAGCGCCTCTGA
Upstream 100 bases:
>100_bases CCCTATCTAGGTTTGGGACGAAACGTCCCATGTGACGTTCCCACCGGGGTTTGTTTTATGTGACGCAGCTCTCAGTGGGC CACCGTTTAGGCTGGTAGTC
Downstream 100 bases:
>100_bases CCCCATTGCGTCCCGCCTCGAGTGGGAACCTCACGCGGATAAAGACCACACAAACCGCGCCAGGTTCCCACTCGATCGGG CTAGTGCCCCGTGAGGTCGT
Product: phosphoserine aminotransferase
Products: NA
Alternate protein names: Phosphohydroxythreonine aminotransferase; PSAT [H]
Number of amino acids: Translated: 371; Mature: 370
Protein sequence:
>371_residues MAELTIPADLLPADGRFGCGPSKVRPEQLQSLVTAGASLFGTSHRQAPVKNLVGRVREGLKELFSAPDGYEVILGNGGST LFWDAAAFGLIREKSLHLTFGEFSAKFASCVAKNPFVGDPIKVVADPGSAPAPVSDPSADVIAWAHNETSTGVMVPVRRP AGSENALVLIDATSGAGGLPVDLSEVDAYYFAPQKNFAGDGGLWVSLMSPAALERVEEIGGSGRWVPDILSLPIAVENSL KNQTYNTPAIGTLLLLADQIDWLLAGGGLDWATKRTADSASRLYSWAEATSYTTPFVADPAQRSQVVGTIDFNDDVDAAA VAKVLRANGVVDTEPYRKLGRNQLRVAMFAAIDPEDISKLTQCVDWVVERL
Sequences:
>Translated_371_residues MAELTIPADLLPADGRFGCGPSKVRPEQLQSLVTAGASLFGTSHRQAPVKNLVGRVREGLKELFSAPDGYEVILGNGGST LFWDAAAFGLIREKSLHLTFGEFSAKFASCVAKNPFVGDPIKVVADPGSAPAPVSDPSADVIAWAHNETSTGVMVPVRRP AGSENALVLIDATSGAGGLPVDLSEVDAYYFAPQKNFAGDGGLWVSLMSPAALERVEEIGGSGRWVPDILSLPIAVENSL KNQTYNTPAIGTLLLLADQIDWLLAGGGLDWATKRTADSASRLYSWAEATSYTTPFVADPAQRSQVVGTIDFNDDVDAAA VAKVLRANGVVDTEPYRKLGRNQLRVAMFAAIDPEDISKLTQCVDWVVERL >Mature_370_residues AELTIPADLLPADGRFGCGPSKVRPEQLQSLVTAGASLFGTSHRQAPVKNLVGRVREGLKELFSAPDGYEVILGNGGSTL FWDAAAFGLIREKSLHLTFGEFSAKFASCVAKNPFVGDPIKVVADPGSAPAPVSDPSADVIAWAHNETSTGVMVPVRRPA GSENALVLIDATSGAGGLPVDLSEVDAYYFAPQKNFAGDGGLWVSLMSPAALERVEEIGGSGRWVPDILSLPIAVENSLK NQTYNTPAIGTLLLLADQIDWLLAGGGLDWATKRTADSASRLYSWAEATSYTTPFVADPAQRSQVVGTIDFNDDVDAAAV AKVLRANGVVDTEPYRKLGRNQLRVAMFAAIDPEDISKLTQCVDWVVERL
Specific function: Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine [H]
COG id: COG1932
COG function: function code HE; Phosphoserine aminotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily [H]
Homologues:
Organism=Homo sapiens, GI17402893, Length=385, Percent_Identity=23.3766233766234, Blast_Score=82, Evalue=6e-16, Organism=Homo sapiens, GI10863955, Length=290, Percent_Identity=24.4827586206897, Blast_Score=69, Evalue=9e-12, Organism=Caenorhabditis elegans, GI17506897, Length=375, Percent_Identity=23.2, Blast_Score=68, Evalue=6e-12, Organism=Drosophila melanogaster, GI21356589, Length=369, Percent_Identity=24.6612466124661, Blast_Score=75, Evalue=8e-14,
Paralogues:
None
Copy number: 2500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000192 - InterPro: IPR022278 - InterPro: IPR006272 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00266 Aminotran_5 [H]
EC number: =2.6.1.52 [H]
Molecular weight: Translated: 39369; Mature: 39238
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAELTIPADLLPADGRFGCGPSKVRPEQLQSLVTAGASLFGTSHRQAPVKNLVGRVREGL CCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH KELFSAPDGYEVILGNGGSTLFWDAAAFGLIREKSLHLTFGEFSAKFASCVAKNPFVGDP HHHHCCCCCCEEEEECCCCEEEEHHHHHHHHHCCCEEEEHHHHHHHHHHHHHCCCCCCCC IKVVADPGSAPAPVSDPSADVIAWAHNETSTGVMVPVRRPAGSENALVLIDATSGAGGLP EEEEECCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCC VDLSEVDAYYFAPQKNFAGDGGLWVSLMSPAALERVEEIGGSGRWVPDILSLPIAVENSL CCHHHCCEEEECCCCCCCCCCCEEEEECCHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHH KNQTYNTPAIGTLLLLADQIDWLLAGGGLDWATKRTADSASRLYSWAEATSYTTPFVADP CCCCCCCCHHHHHHHHHHHHCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC AQRSQVVGTIDFNDDVDAAAVAKVLRANGVVDTEPYRKLGRNQLRVAMFAAIDPEDISKL CCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHCCCCEEEEEEEECCHHHHHHH TQCVDWVVERL HHHHHHHHHHC >Mature Secondary Structure AELTIPADLLPADGRFGCGPSKVRPEQLQSLVTAGASLFGTSHRQAPVKNLVGRVREGL CCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH KELFSAPDGYEVILGNGGSTLFWDAAAFGLIREKSLHLTFGEFSAKFASCVAKNPFVGDP HHHHCCCCCCEEEEECCCCEEEEHHHHHHHHHCCCEEEEHHHHHHHHHHHHHCCCCCCCC IKVVADPGSAPAPVSDPSADVIAWAHNETSTGVMVPVRRPAGSENALVLIDATSGAGGLP EEEEECCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCC VDLSEVDAYYFAPQKNFAGDGGLWVSLMSPAALERVEEIGGSGRWVPDILSLPIAVENSL CCHHHCCEEEECCCCCCCCCCCEEEEECCHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHH KNQTYNTPAIGTLLLLADQIDWLLAGGGLDWATKRTADSASRLYSWAEATSYTTPFVADP CCCCCCCCHHHHHHHHHHHHCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC AQRSQVVGTIDFNDDVDAAAVAKVLRANGVVDTEPYRKLGRNQLRVAMFAAIDPEDISKL CCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHCCCCEEEEEEEECCHHHHHHH TQCVDWVVERL HHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA