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The map label for this gene is ycdQ [C]

Identifier: 169628023

GI number: 169628023

Start: 916857

End: 918080

Strand: Direct

Name: ycdQ [C]

Synonym: MAB_0926

Alternate gene names: 169628023

Gene position: 916857-918080 (Clockwise)

Preceding gene: 169628019

Following gene: 169628024

Centisome position: 18.09

GC content: 65.6

Gene sequence:

>1224_bases
GTGACCAGTGTGATGCAGCCGATCGATACCCCGACGGCACCGACCGCGATCCGCGCGACGACTCTCGACATCGTGATCCC
CGTATACAACGAGGAGCACGACTTGGAGCCATGCGTGCGGCGGTTGCATGCGTTCCTGGCGGACGAGGTTCCGTATTCCG
CCCGTATCACCATCGCCGACAACGCCAGCACCGACAGCACGCTGAAGATCGCACACCGTCTCTCACGCGAGCTGGTCGGC
GTCGACGTGCTGCACTTGGAGGAGAAGGGGCGGGGGCGGGCACTCGCGGCTGCCTGGCTGTCCTCGGACGCCGAGGTGGT
CGCCTACTGCGATGTGGACTTGTCCACCGACCTCAACGCGCTCATGCCGCTGGTGGCGCCACTGATTTCGGGACACTCCG
ATGTCGCGTACGGCTCGCGGCTCAACCGCAACTCGCGGGTGGTGCGCGGCCCCAAGCGCGAGTTCATCTCGCGCACCTAC
AACCTGATTTTGCATGCCTCGCTACAGGTCCGGTTCTCCGACGCTCAGTGCGGCTTCAAGGCGATCCGTACCGATGTCGC
GCGCCAACTGCTGCCGCTGGTCGAGGACAAGGAGTGGTTCTTCGACACTGAGCTGTTGGTGCTCGCCGAGCGGGTCGGCC
TGCGCATCCACGAGGTGCCGGTCGACTGGGTGGATGACCCGGACAGCCGGGTGGACATCGTCGACACCGTGCGCAAAGAC
CTGCTCGGCATCTGGCGGCTGGGCCGGGCGCTCATGCTCGGCACGCTGCCGCTGGAGGAGCTGCGGCACAGTCTCGGCCG
CGAGCCCCTCGTGGACGGCGTGCCCGCGGGCATGGTCGGCCAGCTGGTGCGGTTCGGAATCATCGGTGTGGCAAGCACAT
TGGCCTATGCCGTGCTGTTCCTGGCGCTGCACGGCCTGGCCGGTGACCAGGCGGCCAACTTCCTTGCCCTGCTCATCACC
GCGGTGCTCAACACCTCGGCCAACCGCTTCTTCACCTTCGGGGTACGCGGTCGGCGTGACGCCGCCAAACATCAATTCCA
GGGACTCGTCATCTTCGGCATCGGGCTCGCCCTGACCAGCGGATCGCTGGTCGCGATGCATCATCTGGTTCCCGATGCCT
CCAAGCACGTGCTGCTGATCGTGCTCACGGTGGCCAATCTTGTTGCCACGCTGATCCGGTTCGTCGGGTTGCGGTGGGTG
TTCCGAAGCGCGAATAGCCGATGA

Upstream 100 bases:

>100_bases
CAATTCAATTGTGCACAATTGATACAGGGCGGTTTCGTTCACAGGTAACTCACAGTGGCGACCCAGTGACAACAGAGCCG
CGCCGACCATGGTGATTCTC

Downstream 100 bases:

>100_bases
GTGTCTTGTCGACGGCTCGCGGGCGTGCCCGCGAGCCGCTTTCGGTCACCCTGCTGCTGGTCGGAACGGCGGTGGCGTAT
CTGATCAACCTCGCCTCCAA

Product: glycosyltransferase

Products: NA

Alternate protein names: Glycosyl Transferase; Dolichyl-Phosphate Beta-D-Mannosyltransferase; Glycosyltransferase; Dolichyl-Phosphate Beta-Glucosyltransferase; Glycosyl Transferase Family 2 Protein; Dolichol-P-Glucose Synthetase; Dolichol-Phosphate Mannosyltransferase; GtrA Family Protein; Family 2 Glycosyl Transferase; Dolichyl-Phosphate Mannose Synthase Related Protein; Dolichol-P-Glucose Transferase; Group 2 Family Glycosyl Transferase; Apolipoprotein N-Acyltransferase; Dolichol-Phosphate Mannose Synthase; Family 2 Glycosyltransferase; Polyprenol Phosphate Mannosyl Transferase; Family Glycosyltransferase; Family 2 Glycosyl Transferase Protein; Glycosyl Transferase Group 2 Family Protein; Glycosyl Transferase GT2 Family Protein; Cell Wall Biosynthesis Glycosyltransferase-Like Protein; Polyprenyl-Phosphate Beta-D-Mannosyltransferase; Apolipo; B-Glycosyltransferase Glycosyltransferase Family 2 Protein; Polyprenol-Phosphate Glycosyltransferase; Two-Component System Response Regulator; Glycosyltransferase AglD; Polysaccharide Biosynthesis Protein; Glycosyl Transferase Group 2 Family; Glycolsyltransferase; GtrA-Like Family Protein; Gtra-Like Glycosyl Transferase; Glycosyltransferase Involved In Cell Wall Biogenesis; Polyprenol-Phosphate Mannosyltransferase; Glycosyltransferase D; Cell Wall Biogenesis Glycosyltransferase-Like Protein; Cell Wall Biosynthesis Glycosyltransferase

Number of amino acids: Translated: 407; Mature: 406

Protein sequence:

>407_residues
MTSVMQPIDTPTAPTAIRATTLDIVIPVYNEEHDLEPCVRRLHAFLADEVPYSARITIADNASTDSTLKIAHRLSRELVG
VDVLHLEEKGRGRALAAAWLSSDAEVVAYCDVDLSTDLNALMPLVAPLISGHSDVAYGSRLNRNSRVVRGPKREFISRTY
NLILHASLQVRFSDAQCGFKAIRTDVARQLLPLVEDKEWFFDTELLVLAERVGLRIHEVPVDWVDDPDSRVDIVDTVRKD
LLGIWRLGRALMLGTLPLEELRHSLGREPLVDGVPAGMVGQLVRFGIIGVASTLAYAVLFLALHGLAGDQAANFLALLIT
AVLNTSANRFFTFGVRGRRDAAKHQFQGLVIFGIGLALTSGSLVAMHHLVPDASKHVLLIVLTVANLVATLIRFVGLRWV
FRSANSR

Sequences:

>Translated_407_residues
MTSVMQPIDTPTAPTAIRATTLDIVIPVYNEEHDLEPCVRRLHAFLADEVPYSARITIADNASTDSTLKIAHRLSRELVG
VDVLHLEEKGRGRALAAAWLSSDAEVVAYCDVDLSTDLNALMPLVAPLISGHSDVAYGSRLNRNSRVVRGPKREFISRTY
NLILHASLQVRFSDAQCGFKAIRTDVARQLLPLVEDKEWFFDTELLVLAERVGLRIHEVPVDWVDDPDSRVDIVDTVRKD
LLGIWRLGRALMLGTLPLEELRHSLGREPLVDGVPAGMVGQLVRFGIIGVASTLAYAVLFLALHGLAGDQAANFLALLIT
AVLNTSANRFFTFGVRGRRDAAKHQFQGLVIFGIGLALTSGSLVAMHHLVPDASKHVLLIVLTVANLVATLIRFVGLRWV
FRSANSR
>Mature_406_residues
TSVMQPIDTPTAPTAIRATTLDIVIPVYNEEHDLEPCVRRLHAFLADEVPYSARITIADNASTDSTLKIAHRLSRELVGV
DVLHLEEKGRGRALAAAWLSSDAEVVAYCDVDLSTDLNALMPLVAPLISGHSDVAYGSRLNRNSRVVRGPKREFISRTYN
LILHASLQVRFSDAQCGFKAIRTDVARQLLPLVEDKEWFFDTELLVLAERVGLRIHEVPVDWVDDPDSRVDIVDTVRKDL
LGIWRLGRALMLGTLPLEELRHSLGREPLVDGVPAGMVGQLVRFGIIGVASTLAYAVLFLALHGLAGDQAANFLALLITA
VLNTSANRFFTFGVRGRRDAAKHQFQGLVIFGIGLALTSGSLVAMHHLVPDASKHVLLIVLTVANLVATLIRFVGLRWVF
RSANSR

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI7019323, Length=269, Percent_Identity=24.907063197026, Blast_Score=73, Evalue=6e-13,
Organism=Homo sapiens, GI4503363, Length=213, Percent_Identity=26.2910798122066, Blast_Score=72, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI25146207, Length=246, Percent_Identity=26.8292682926829, Blast_Score=81, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI71999402, Length=207, Percent_Identity=27.536231884058, Blast_Score=74, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6325029, Length=255, Percent_Identity=24.3137254901961, Blast_Score=77, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24582769, Length=257, Percent_Identity=27.6264591439689, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24585265, Length=208, Percent_Identity=26.9230769230769, Blast_Score=72, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44691; Mature: 44560

Theoretical pI: Translated: 7.20; Mature: 7.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSVMQPIDTPTAPTAIRATTLDIVIPVYNEEHDLEPCVRRLHAFLADEVPYSARITIAD
CCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEC
NASTDSTLKIAHRLSRELVGVDVLHLEEKGRGRALAAAWLSSDAEVVAYCDVDLSTDLNA
CCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCEEEHHHHCCCCCEEEEECCCCCCCHHH
LMPLVAPLISGHSDVAYGSRLNRNSRVVRGPKREFISRTYNLILHASLQVRFSDAQCGFK
HHHHHHHHHCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHEEEEEEEEEECCCHHHHH
AIRTDVARQLLPLVEDKEWFFDTELLVLAERVGLRIHEVPVDWVDDPDSRVDIVDTVRKD
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCHHHHHHHHH
LLGIWRLGRALMLGTLPLEELRHSLGREPLVDGVPAGMVGQLVRFGIIGVASTLAYAVLF
HHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LALHGLAGDQAANFLALLITAVLNTSANRFFTFGVRGRRDAAKHQFQGLVIFGIGLALTS
HHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCEEEEEEHHHHCC
GSLVAMHHLVPDASKHVLLIVLTVANLVATLIRFVGLRWVFRSANSR
CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TSVMQPIDTPTAPTAIRATTLDIVIPVYNEEHDLEPCVRRLHAFLADEVPYSARITIAD
CCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEC
NASTDSTLKIAHRLSRELVGVDVLHLEEKGRGRALAAAWLSSDAEVVAYCDVDLSTDLNA
CCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCEEEHHHHCCCCCEEEEECCCCCCCHHH
LMPLVAPLISGHSDVAYGSRLNRNSRVVRGPKREFISRTYNLILHASLQVRFSDAQCGFK
HHHHHHHHHCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHEEEEEEEEEECCCHHHHH
AIRTDVARQLLPLVEDKEWFFDTELLVLAERVGLRIHEVPVDWVDDPDSRVDIVDTVRKD
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCHHHHHHHHH
LLGIWRLGRALMLGTLPLEELRHSLGREPLVDGVPAGMVGQLVRFGIIGVASTLAYAVLF
HHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LALHGLAGDQAANFLALLITAVLNTSANRFFTFGVRGRRDAAKHQFQGLVIFGIGLALTS
HHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCEEEEEEHHHHCC
GSLVAMHHLVPDASKHVLLIVLTVANLVATLIRFVGLRWVFRSANSR
CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA