| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628017
Identifier: 169628017
GI number: 169628017
Start: 910342
End: 911721
Strand: Reverse
Name: 169628017
Synonym: MAB_0918c
Alternate gene names: NA
Gene position: 911721-910342 (Counterclockwise)
Preceding gene: 169628020
Following gene: 169628016
Centisome position: 17.99
GC content: 60.51
Gene sequence:
>1380_bases ATGCCCAGTATGACAATTGGCAAATACTGCGCGCAGGCCAAGGCGCGAACAGTGGCGATTGACTGCGATCGTCGACGTTG GCGAGCTGCCATCAGATCGGTTGCCGTCCTCTTGGTTTCACTAGCATTAACACCTTTTTTTGCACCGGGTGCCGCTCGGG CCGACGAGAGCCGATACTGGCAGTTCTATACCCCGCCTGAGCCTCTCCCCGCGGGCGCTCTCGGGGATCTCATCCGCACC GAACCGTCGCGACTGGCGTTGGAGCCGTCAGGGCAGCTTGGTTCCTACGTCGGAACCGGAACCCGGATCATGTACCGCAG CACCGATAACAACGGCAAGCCGGTAGCGGCGACCGGAACGTACATCGAACCGGATAACCCATGGCCGGGCGATGGGCCCA GGCCGCTACTGGTCTACGCGCCGCTGCCGAACGGAATGGGTGAGCAATGCGCAGCATCGCGGTTGATCAACCAGGGTATT CATGCGTCGGGCGACACCGGGTTCGATCTGATGGTCAATTTGGATTCGATGTTCCTCACGACGCTATTGGCGCGGGGATA TTCCATCGTGATCCCCGACGGTATCGGGTCGGGTGTACACGGCCGGATGGCACCGCAGTTGCTCATGCGGATTGCCTCAG CGACTGCGGTGATCGACGCCGCCAGGGCGGCGAAGAAACTCCCTGGTACCTCGCTGACACCTGATGGGCCCGTGGCATTT TGGGGTTGGTTCTCCGGTGGTTCGGCTGCACTGGCAGCGGCCGAACTGGCGTCGACCTATGGACCCGAACTCAAGATTGC CGGCACCGTTGCCATGGAACCGGTGACCGATATGGCGAGCGTGGCGTCCTCGGCGGATGGTTCCTTCCTCGTTGGGGCGA TGGGATGGCTGCTGAACGCGATCGTCGCGACCTATCCCGAATTTGACCAGCCCCTGAGGGAGATGCTCACACCTCGCGGC CTCGAAATGTTCGAGAACACCGCGGGGCAATGCATGCTACAGACAGGGACTGATTACGCATTTCGCCACGTGCAGCCCTG GTTCAAGAACGATATTCTCCAGGCCGTTCGGCAGGAACCGTTTAAGAGCCTCAGTGACGCTCAACGAATCGGTAACCATA AACCGACCGGGCCGGTGTACATCGAACACAATCGATGGGACCCAGTGGGGCCGTACGCGGATGCGATGGCAACCGCGAAA GACTGGTGCGCAATGGGAGCCGACGTCACATTCTGGACCAACGAGCTGCCACCGTTGTTCAACAAGTTGGGTACCAATCT GTTTCTGGCGCCGTTGGTAGACGGTGAGCGGAACATGGCCTGGCTGGCGGACCGCTTCAACGGTGTTCCGACGAGTTCCA ACTGCTCAGAGCTGCCATGA
Upstream 100 bases:
>100_bases TGTGAGCCAGTTCATAAATTCTGTGAGCCTAGCGCTGCATCACAGTCACGGGCGCCCTCGCGGCTAGCGAGACGAGACCA ACCGACAAGGTGGAGCACAG
Downstream 100 bases:
>100_bases GCAGGCGGTCAACACCGCGGCGCCCACCAACGATGTCGCTTCACAGTTCGCGCTTACGCCAAAACGGGTATGCGATCTTC TCGGTATCCCCAGAGGACTG
Product: triacylglycerol lipase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 459; Mature: 458
Protein sequence:
>459_residues MPSMTIGKYCAQAKARTVAIDCDRRRWRAAIRSVAVLLVSLALTPFFAPGAARADESRYWQFYTPPEPLPAGALGDLIRT EPSRLALEPSGQLGSYVGTGTRIMYRSTDNNGKPVAATGTYIEPDNPWPGDGPRPLLVYAPLPNGMGEQCAASRLINQGI HASGDTGFDLMVNLDSMFLTTLLARGYSIVIPDGIGSGVHGRMAPQLLMRIASATAVIDAARAAKKLPGTSLTPDGPVAF WGWFSGGSAALAAAELASTYGPELKIAGTVAMEPVTDMASVASSADGSFLVGAMGWLLNAIVATYPEFDQPLREMLTPRG LEMFENTAGQCMLQTGTDYAFRHVQPWFKNDILQAVRQEPFKSLSDAQRIGNHKPTGPVYIEHNRWDPVGPYADAMATAK DWCAMGADVTFWTNELPPLFNKLGTNLFLAPLVDGERNMAWLADRFNGVPTSSNCSELP
Sequences:
>Translated_459_residues MPSMTIGKYCAQAKARTVAIDCDRRRWRAAIRSVAVLLVSLALTPFFAPGAARADESRYWQFYTPPEPLPAGALGDLIRT EPSRLALEPSGQLGSYVGTGTRIMYRSTDNNGKPVAATGTYIEPDNPWPGDGPRPLLVYAPLPNGMGEQCAASRLINQGI HASGDTGFDLMVNLDSMFLTTLLARGYSIVIPDGIGSGVHGRMAPQLLMRIASATAVIDAARAAKKLPGTSLTPDGPVAF WGWFSGGSAALAAAELASTYGPELKIAGTVAMEPVTDMASVASSADGSFLVGAMGWLLNAIVATYPEFDQPLREMLTPRG LEMFENTAGQCMLQTGTDYAFRHVQPWFKNDILQAVRQEPFKSLSDAQRIGNHKPTGPVYIEHNRWDPVGPYADAMATAK DWCAMGADVTFWTNELPPLFNKLGTNLFLAPLVDGERNMAWLADRFNGVPTSSNCSELP >Mature_458_residues PSMTIGKYCAQAKARTVAIDCDRRRWRAAIRSVAVLLVSLALTPFFAPGAARADESRYWQFYTPPEPLPAGALGDLIRTE PSRLALEPSGQLGSYVGTGTRIMYRSTDNNGKPVAATGTYIEPDNPWPGDGPRPLLVYAPLPNGMGEQCAASRLINQGIH ASGDTGFDLMVNLDSMFLTTLLARGYSIVIPDGIGSGVHGRMAPQLLMRIASATAVIDAARAAKKLPGTSLTPDGPVAFW GWFSGGSAALAAAELASTYGPELKIAGTVAMEPVTDMASVASSADGSFLVGAMGWLLNAIVATYPEFDQPLREMLTPRGL EMFENTAGQCMLQTGTDYAFRHVQPWFKNDILQAVRQEPFKSLSDAQRIGNHKPTGPVYIEHNRWDPVGPYADAMATAKD WCAMGADVTFWTNELPPLFNKLGTNLFLAPLVDGERNMAWLADRFNGVPTSSNCSELP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. Lipase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005152 [H]
Pfam domain/function: PF03583 LIP [H]
EC number: NA
Molecular weight: Translated: 49378; Mature: 49247
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSMTIGKYCAQAKARTVAIDCDRRRWRAAIRSVAVLLVSLALTPFFAPGAARADESRYW CCCCCHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCE QFYTPPEPLPAGALGDLIRTEPSRLALEPSGQLGSYVGTGTRIMYRSTDNNGKPVAATGT EEECCCCCCCCCHHHHHHHCCCCCEEECCCCCCCCCCCCCCEEEEEECCCCCCEEEEECC YIEPDNPWPGDGPRPLLVYAPLPNGMGEQCAASRLINQGIHASGDTGFDLMVNLDSMFLT EECCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHH TLLARGYSIVIPDGIGSGVHGRMAPQLLMRIASATAVIDAARAAKKLPGTSLTPDGPVAF HHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEE WGWFSGGSAALAAAELASTYGPELKIAGTVAMEPVTDMASVASSADGSFLVGAMGWLLNA EEECCCCCHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHH IVATYPEFDQPLREMLTPRGLEMFENTAGQCMLQTGTDYAFRHVQPWFKNDILQAVRQEP HHHHCCCHHHHHHHHCCCCCHHHHHCCCCCEEEECCCCHHHHHCCCHHHHHHHHHHHHHH FKSLSDAQRIGNHKPTGPVYIEHNRWDPVGPYADAMATAKDWCAMGADVTFWTNELPPLF HHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHH NKLGTNLFLAPLVDGERNMAWLADRFNGVPTSSNCSELP HHHCCCEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure PSMTIGKYCAQAKARTVAIDCDRRRWRAAIRSVAVLLVSLALTPFFAPGAARADESRYW CCCCHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCE QFYTPPEPLPAGALGDLIRTEPSRLALEPSGQLGSYVGTGTRIMYRSTDNNGKPVAATGT EEECCCCCCCCCHHHHHHHCCCCCEEECCCCCCCCCCCCCCEEEEEECCCCCCEEEEECC YIEPDNPWPGDGPRPLLVYAPLPNGMGEQCAASRLINQGIHASGDTGFDLMVNLDSMFLT EECCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHH TLLARGYSIVIPDGIGSGVHGRMAPQLLMRIASATAVIDAARAAKKLPGTSLTPDGPVAF HHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEE WGWFSGGSAALAAAELASTYGPELKIAGTVAMEPVTDMASVASSADGSFLVGAMGWLLNA EEECCCCCHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHH IVATYPEFDQPLREMLTPRGLEMFENTAGQCMLQTGTDYAFRHVQPWFKNDILQAVRQEP HHHHCCCHHHHHHHHCCCCCHHHHHCCCCCEEEECCCCHHHHHCCCHHHHHHHHHHHHHH FKSLSDAQRIGNHKPTGPVYIEHNRWDPVGPYADAMATAKDWCAMGADVTFWTNELPPLF HHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHH NKLGTNLFLAPLVDGERNMAWLADRFNGVPTSSNCSELP HHHCCCEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]