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The map label for this gene is yngJ [H]

Identifier: 169627921

GI number: 169627921

Start: 816945

End: 818138

Strand: Direct

Name: yngJ [H]

Synonym: MAB_0822

Alternate gene names: 169627921

Gene position: 816945-818138 (Clockwise)

Preceding gene: 169627920

Following gene: 169627922

Centisome position: 16.12

GC content: 62.48

Gene sequence:

>1194_bases
ATGTCCACTGCAGTAACCCCGTCGCCGGAGATGTGCTCGACCCCGCTGGAGCTGTTCGACACAGATCGCCGGCTGGACCA
GGACGAGCGCGACATCGCGGCCACGGTGCGTAAGTTCGTCGATACCAAGCTGCGTCCGAACATCGCGGAATGGTTTGAGT
CCGCGACACTTCCCAGAGATCTGGCACGCCAGTTCGGTGAACTGGGTGTGCTCGGTATGCACCTCGACGGCTACGGGTGT
GCGGGCACCAACGCCGTGAGCTACGGGTTGGCTTGCCTTGAATTGGAGGCAGGCGATAGCGGTCTGCGCAGCTTCGTGTC
GGTGCAGGGTTCTCTGTCCATGTATTCGATCCACCGGTACGGCTCGGAAGAGCAGAAGCAGGAATGGTTGCCGCAGTTGG
CATCTGGTCATGCCATTGGCTGCTTCGGTCTTACCGAGCCGGACTTCGGATCCAACCCCGGGGGGATGCGAACCCGCGCA
CGCCGCGACGGCAAGGACTGGATACTCGACGGCACGAAGATGTGGATCACCAACGGCAATCTTGCCGATGTCGCCACAGT
CTGGGCGCAGACCGACGACGGTGTGCGTGGTTTCGTCGTGCCGACGGCCACCAAGGGATTCGCCGCCAATGTGATTCACA
AGAAGCTATCCCTGCGGGCATCGGTGACCTCGGAGCTTGTGCTCGACGGTGTGCGGCTGCCGGATTCGGCGGAACTGCCC
GGCGCCCGGGGGCTTTCGGCTCCGCTGTCCTGTCTCAACGAAGCACGTTTCGGCATCGTCTTCGGCGCGCTGGGCGCCGC
GCGCGACAGCCTGCAAGCGGCGCTTGACTATACGCGTACTCGCGAGGTGTTCGGGCGTCCGTTGTCGAGCTATCAGCTCA
GCCAGGAGAAGCTCGCCAACATGACGGTTCAGCTGGGCATGGGCATGCTGTTGGCGCTGCATCTGGGCCGCATCAAGGAC
TCTGTCGGGTTACGGCCGGAGCAGGTCAGCCTGGGCAAGCTGAACAACGTGCGTGAGGCACTCAACATCGCCCGTGAATG
CCGAACCCTATTAGGTGCAAGCGGTATCACCCTTGAATACTCGCCCCTGCGCCATGCCAACAATCTTGAATCGGTGCTCA
CCTATGAGGGCACGTCCGAGATGCATCTGCTTTCGATCGGGCGAGCGCTGACCGGCCAGGCAGCCTTCCGCTGA

Upstream 100 bases:

>100_bases
ATGCCGGACGAGCTGCTGCAAGAGGCCCTCGCCGTGCTGCGCGACGCGTTCCGGAACCTCTAAAGACGTTGCGAATAGAC
CAGACCCAAGGAGTTTCGAT

Downstream 100 bases:

>100_bases
GCCCACACGTTCCAGGTGGAGTAGAAATCACGATGCATATCAATGAGATTCAAAGTTTTGTGGGTGGCCGGTGGATCAGC
GGGGGCGGCCAGGCGGTGAT

Product: acyl-CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 396

Protein sequence:

>397_residues
MSTAVTPSPEMCSTPLELFDTDRRLDQDERDIAATVRKFVDTKLRPNIAEWFESATLPRDLARQFGELGVLGMHLDGYGC
AGTNAVSYGLACLELEAGDSGLRSFVSVQGSLSMYSIHRYGSEEQKQEWLPQLASGHAIGCFGLTEPDFGSNPGGMRTRA
RRDGKDWILDGTKMWITNGNLADVATVWAQTDDGVRGFVVPTATKGFAANVIHKKLSLRASVTSELVLDGVRLPDSAELP
GARGLSAPLSCLNEARFGIVFGALGAARDSLQAALDYTRTREVFGRPLSSYQLSQEKLANMTVQLGMGMLLALHLGRIKD
SVGLRPEQVSLGKLNNVREALNIARECRTLLGASGITLEYSPLRHANNLESVLTYEGTSEMHLLSIGRALTGQAAFR

Sequences:

>Translated_397_residues
MSTAVTPSPEMCSTPLELFDTDRRLDQDERDIAATVRKFVDTKLRPNIAEWFESATLPRDLARQFGELGVLGMHLDGYGC
AGTNAVSYGLACLELEAGDSGLRSFVSVQGSLSMYSIHRYGSEEQKQEWLPQLASGHAIGCFGLTEPDFGSNPGGMRTRA
RRDGKDWILDGTKMWITNGNLADVATVWAQTDDGVRGFVVPTATKGFAANVIHKKLSLRASVTSELVLDGVRLPDSAELP
GARGLSAPLSCLNEARFGIVFGALGAARDSLQAALDYTRTREVFGRPLSSYQLSQEKLANMTVQLGMGMLLALHLGRIKD
SVGLRPEQVSLGKLNNVREALNIARECRTLLGASGITLEYSPLRHANNLESVLTYEGTSEMHLLSIGRALTGQAAFR
>Mature_396_residues
STAVTPSPEMCSTPLELFDTDRRLDQDERDIAATVRKFVDTKLRPNIAEWFESATLPRDLARQFGELGVLGMHLDGYGCA
GTNAVSYGLACLELEAGDSGLRSFVSVQGSLSMYSIHRYGSEEQKQEWLPQLASGHAIGCFGLTEPDFGSNPGGMRTRAR
RDGKDWILDGTKMWITNGNLADVATVWAQTDDGVRGFVVPTATKGFAANVIHKKLSLRASVTSELVLDGVRLPDSAELPG
ARGLSAPLSCLNEARFGIVFGALGAARDSLQAALDYTRTREVFGRPLSSYQLSQEKLANMTVQLGMGMLLALHLGRIKDS
VGLRPEQVSLGKLNNVREALNIARECRTLLGASGITLEYSPLRHANNLESVLTYEGTSEMHLLSIGRALTGQAAFR

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4503943, Length=378, Percent_Identity=48.4126984126984, Blast_Score=349, Evalue=2e-96,
Organism=Homo sapiens, GI7669494, Length=358, Percent_Identity=48.0446927374302, Blast_Score=327, Evalue=1e-89,
Organism=Homo sapiens, GI4557233, Length=379, Percent_Identity=34.3007915567282, Blast_Score=201, Evalue=1e-51,
Organism=Homo sapiens, GI4501859, Length=386, Percent_Identity=28.2383419689119, Blast_Score=157, Evalue=1e-38,
Organism=Homo sapiens, GI4501857, Length=384, Percent_Identity=29.4270833333333, Blast_Score=157, Evalue=2e-38,
Organism=Homo sapiens, GI226958412, Length=388, Percent_Identity=28.6082474226804, Blast_Score=152, Evalue=5e-37,
Organism=Homo sapiens, GI226958414, Length=343, Percent_Identity=28.8629737609329, Blast_Score=140, Evalue=2e-33,
Organism=Homo sapiens, GI4557235, Length=333, Percent_Identity=28.8288288288288, Blast_Score=135, Evalue=4e-32,
Organism=Homo sapiens, GI76496475, Length=333, Percent_Identity=28.8288288288288, Blast_Score=135, Evalue=5e-32,
Organism=Homo sapiens, GI187960098, Length=377, Percent_Identity=26.790450928382, Blast_Score=131, Evalue=9e-31,
Organism=Homo sapiens, GI4557231, Length=377, Percent_Identity=26.790450928382, Blast_Score=131, Evalue=1e-30,
Organism=Homo sapiens, GI7656849, Length=384, Percent_Identity=25.2604166666667, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI21361497, Length=356, Percent_Identity=28.6516853932584, Blast_Score=129, Evalue=4e-30,
Organism=Homo sapiens, GI38505218, Length=295, Percent_Identity=25.0847457627119, Blast_Score=75, Evalue=7e-14,
Organism=Escherichia coli, GI87081958, Length=385, Percent_Identity=25.4545454545455, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1786223, Length=384, Percent_Identity=23.4375, Blast_Score=82, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI17534353, Length=383, Percent_Identity=44.6475195822454, Blast_Score=338, Evalue=4e-93,
Organism=Caenorhabditis elegans, GI17508101, Length=373, Percent_Identity=29.4906166219839, Blast_Score=167, Evalue=1e-41,
Organism=Caenorhabditis elegans, GI17506239, Length=380, Percent_Identity=28.4210526315789, Blast_Score=162, Evalue=2e-40,
Organism=Caenorhabditis elegans, GI17538396, Length=376, Percent_Identity=30.0531914893617, Blast_Score=160, Evalue=2e-39,
Organism=Caenorhabditis elegans, GI17534899, Length=379, Percent_Identity=28.4960422163588, Blast_Score=145, Evalue=3e-35,
Organism=Caenorhabditis elegans, GI71985184, Length=358, Percent_Identity=31.0055865921788, Blast_Score=145, Evalue=3e-35,
Organism=Caenorhabditis elegans, GI17569725, Length=383, Percent_Identity=27.9373368146214, Blast_Score=143, Evalue=2e-34,
Organism=Caenorhabditis elegans, GI71985192, Length=269, Percent_Identity=33.8289962825279, Blast_Score=143, Evalue=2e-34,
Organism=Caenorhabditis elegans, GI17533517, Length=383, Percent_Identity=24.8041775456919, Blast_Score=142, Evalue=3e-34,
Organism=Caenorhabditis elegans, GI71990804, Length=260, Percent_Identity=30.3846153846154, Blast_Score=129, Evalue=3e-30,
Organism=Caenorhabditis elegans, GI17570075, Length=385, Percent_Identity=25.1948051948052, Blast_Score=122, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI32563615, Length=230, Percent_Identity=32.1739130434783, Blast_Score=122, Evalue=4e-28,
Organism=Caenorhabditis elegans, GI17551932, Length=294, Percent_Identity=29.2517006802721, Blast_Score=114, Evalue=8e-26,
Organism=Caenorhabditis elegans, GI71982178, Length=278, Percent_Identity=27.6978417266187, Blast_Score=111, Evalue=5e-25,
Organism=Caenorhabditis elegans, GI17505929, Length=268, Percent_Identity=28.7313432835821, Blast_Score=109, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI17562446, Length=269, Percent_Identity=25.6505576208178, Blast_Score=71, Evalue=9e-13,
Organism=Drosophila melanogaster, GI19920834, Length=387, Percent_Identity=47.5452196382429, Blast_Score=347, Evalue=7e-96,
Organism=Drosophila melanogaster, GI21356377, Length=370, Percent_Identity=31.0810810810811, Blast_Score=191, Evalue=6e-49,
Organism=Drosophila melanogaster, GI24646207, Length=373, Percent_Identity=29.2225201072386, Blast_Score=170, Evalue=1e-42,
Organism=Drosophila melanogaster, GI24666513, Length=374, Percent_Identity=28.8770053475936, Blast_Score=169, Evalue=4e-42,
Organism=Drosophila melanogaster, GI281363737, Length=342, Percent_Identity=30.1169590643275, Blast_Score=147, Evalue=1e-35,
Organism=Drosophila melanogaster, GI24660351, Length=389, Percent_Identity=28.0205655526992, Blast_Score=140, Evalue=1e-33,
Organism=Drosophila melanogaster, GI21355753, Length=378, Percent_Identity=27.5132275132275, Blast_Score=140, Evalue=2e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 43008; Mature: 42877

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTAVTPSPEMCSTPLELFDTDRRLDQDERDIAATVRKFVDTKLRPNIAEWFESATLPRD
CCCCCCCCHHHHCCCHHHHCCHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHH
LARQFGELGVLGMHLDGYGCAGTNAVSYGLACLELEAGDSGLRSFVSVQGSLSMYSIHRY
HHHHHHCCCEEEEEECCCCCCCCCHHHHCEEEEEEECCCHHHHHHHHHCCCCEEEEHHHC
GSEEQKQEWLPQLASGHAIGCFGLTEPDFGSNPGGMRTRARRDGKDWILDGTKMWITNGN
CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHCCCCCEEECCEEEEEECCC
LADVATVWAQTDDGVRGFVVPTATKGFAANVIHKKLSLRASVTSELVLDGVRLPDSAELP
HHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
GARGLSAPLSCLNEARFGIVFGALGAARDSLQAALDYTRTREVFGRPLSSYQLSQEKLAN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
MTVQLGMGMLLALHLGRIKDSVGLRPEQVSLGKLNNVREALNIARECRTLLGASGITLEY
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
SPLRHANNLESVLTYEGTSEMHLLSIGRALTGQAAFR
CCCCCCCCHHHHEEECCCCCEEHHHHHHHHCCCCCCC
>Mature Secondary Structure 
STAVTPSPEMCSTPLELFDTDRRLDQDERDIAATVRKFVDTKLRPNIAEWFESATLPRD
CCCCCCCHHHHCCCHHHHCCHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHH
LARQFGELGVLGMHLDGYGCAGTNAVSYGLACLELEAGDSGLRSFVSVQGSLSMYSIHRY
HHHHHHCCCEEEEEECCCCCCCCCHHHHCEEEEEEECCCHHHHHHHHHCCCCEEEEHHHC
GSEEQKQEWLPQLASGHAIGCFGLTEPDFGSNPGGMRTRARRDGKDWILDGTKMWITNGN
CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHCCCCCEEECCEEEEEECCC
LADVATVWAQTDDGVRGFVVPTATKGFAANVIHKKLSLRASVTSELVLDGVRLPDSAELP
HHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
GARGLSAPLSCLNEARFGIVFGALGAARDSLQAALDYTRTREVFGRPLSSYQLSQEKLAN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
MTVQLGMGMLLALHLGRIKDSVGLRPEQVSLGKLNNVREALNIARECRTLLGASGITLEY
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
SPLRHANNLESVLTYEGTSEMHLLSIGRALTGQAAFR
CCCCCCCCHHHHEEECCCCCEEHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]