| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627903
Identifier: 169627903
GI number: 169627903
Start: 793272
End: 795428
Strand: Direct
Name: 169627903
Synonym: MAB_0803
Alternate gene names: NA
Gene position: 793272-795428 (Clockwise)
Preceding gene: 169627902
Following gene: 169627904
Centisome position: 15.66
GC content: 66.3
Gene sequence:
>2157_bases ATGACCGACACCGATCGCCCTGATGGCGATGATGCGCCCACGCAAACCCTGCCCGCCGCAGCCCCATTGTCCGCGCCGGA GTTGACGGGCTTTCCTGCCGGGATCGTCGGGGCCGCGCTGACGGTGCTCGGGGTGTGGGGTCTACATGTGCTCACCCGCG GTGATGGTGTGGCAGGTGTCCTCGGCTGGGTGATCCTGCTGTGCTTGGCCTTTAGCGCCTTGGGTAAAGGCATCACCTTG CTACGTCGCGCCCTGGCCCCGCTGTCGGCGGTGTGGTCGGCATCGGTCGACGGTGTGCCACCGCTGCTACGAGCCGCGGC GGGGATCATTGTCGGTGCGGCCGGTATCTGGTGGGTGATGCGCGGACACGCCAGCGGATGGTGGGCACAGATAACCGGCG GTGACTCCGGCAGCGGGCTGGGGTGGTCGCTGCCCTCACAGCTCGTGCAAGTGGCGATCATGGTGGTCGCCGGAGCGCTG CTGTTCGGCGGCGCCAAGGTCTTGGGCAAGCTTATCTTCGCCAACTCCGGTACCCGCCAACAGCCCTCACCCAACCACGA CGGTGGCCAGCGTTGGCGGCAGTGGTGGGCCAGCCACCCTGGCCTGGGTTTGACGCTGCTGGCTGGCGGCGGCGCTCTGG TGTTCCTGTCCGGGTATGTAGTTCCGCGGGTGTCGTCATGGTTGACCGGCGATGACCCGATGGCGGCCCTGGCGGCGATC ACCGCGATCCTGGCTCTGGCGCTGCTGGCCAACACGTGGTGGTGGCGGGCGCTGTCGGGCTGGTGGGCGTGGGCTCACAC CCCCAACGGCCCCGGCGGGCCCACCCCGATCGGGCAGATCTATGCCGGCGCCGGGGTGTTGGCATTGATCGCGTTCTCGG CCACCGCCTTCGGTCTGGCCACCTTCTCCTCTTACCTGCCCCAGAACGCCGCTACAGCTTCGGCTGATCCGTGTGGGGAT CGTTGTGGTGGGGGTGGCAATGGGCAAGGTTCCTATGGTCCAGATACCGGTAACTTCCAGCCTCCGCAGATGCCCGGTCA GCAGCCCGACTATCAAGGCGGGATCAATCAGCCGCCGCTAGACCAAAACTCGGGGATCTCGATTTACAACGAAAGCCCTG GCCAGGGCGGTCAGCAGATTCCGCAACAAAACATGGGCCCGCAGACCTCTGGCCAGCGCGCCGCACACGGAGAACCGTTG CCCAACTACGGGCCCTGGCAACCCGACGCACAACCTCCCGCCCAAGCACCCGTACAACAGGCACCCGTTCAGCAGGCTCC TCAAGCTCCGCAGCAGCCCGCACAAGCACCACAAAATCCTGCCGGCCAGCAGCCGGCGCAGCAGGCACCGCAACAACCAG CCGGGCAGCAACCGGCACAACAGAATCCGCCGCAACAGGGCCAGCCTGGCCAGCAGCAGCCACAGAATCCTGTCAACCAG CAGACCCCGCAACAGCAGCCGCAGAAAGAGCCGGACACACCGAAGAAGAATCCGATGGATCCCACGGATCTCGCGACGGC GGCCACACGCCGCGGTTCACAACAAGCCGGGCAGCAAGCCGCCCAGCAGGCTGGACAACAAGGCGCCCAACAAGCGGCCC AGCAGACCACCCAGGGGACACAGCAGGCGACCCAGCAGGGCACACAAAAGCCGGTCGAATCCGGCGAACAGTTCCCCGCC GACTTCCACATGGGCCAGCTCGGTGACGGCCTGAGCAAAACCGGGAAGTACGCCAATACAGGTACCCACTGGGCTCCCGA CGCGAAAGTCTCGACCATGTCGAAAAGCACGGCCCAAAACCTTCTGCGGGCCGGAGAAAAGTTCACTTGGCTGGGGCGTG GGATGGAAGTCGCCAAAGCTGGTGTCGACTTGGCCAATGGTGCGCCGGTACCGGAAACGGTCGGTAGCACTGTGGGTTCG CTTGCCGGCGCGTGGGCCGGGGCCGAGGGCGGTGCCATCATCGGGGCCTCGATCGGATCATTCTTCCCCGGCCCCGGCAC CGTGATCGGGGGTGCAGTAGGCGGGGTGATCGGCGGGTTCGTCGGCAGCGGCCTAGGCTCCGAAGTAGGAAAAGCGGCCG GCGGGGCTGTCCGCGCAGCTGGTTCTGCACTCTCCAAAGCTGGCGGCGCCGTCGCATCCTTCTTCGGCAGCTTGTAA
Upstream 100 bases:
>100_bases CCTGGCACCCGGCCAGCCCGCCGCAGCAGCGGGCGGAGCTTGACATGCCTACGGCACAACATCTTTCACAGCACGTTCTC CGGGGAAAGAAGGTTAACCG
Downstream 100 bases:
>100_bases CTGAAAGAAACGAGAAACCATGCTCACAGTAGCCGCAGTAATAATCGGCTTTCTCGGATTAGCAATCACGCTCGTCCTCA TCCAGCTCCCGGAACGCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 718; Mature: 717
Protein sequence:
>718_residues MTDTDRPDGDDAPTQTLPAAAPLSAPELTGFPAGIVGAALTVLGVWGLHVLTRGDGVAGVLGWVILLCLAFSALGKGITL LRRALAPLSAVWSASVDGVPPLLRAAAGIIVGAAGIWWVMRGHASGWWAQITGGDSGSGLGWSLPSQLVQVAIMVVAGAL LFGGAKVLGKLIFANSGTRQQPSPNHDGGQRWRQWWASHPGLGLTLLAGGGALVFLSGYVVPRVSSWLTGDDPMAALAAI TAILALALLANTWWWRALSGWWAWAHTPNGPGGPTPIGQIYAGAGVLALIAFSATAFGLATFSSYLPQNAATASADPCGD RCGGGGNGQGSYGPDTGNFQPPQMPGQQPDYQGGINQPPLDQNSGISIYNESPGQGGQQIPQQNMGPQTSGQRAAHGEPL PNYGPWQPDAQPPAQAPVQQAPVQQAPQAPQQPAQAPQNPAGQQPAQQAPQQPAGQQPAQQNPPQQGQPGQQQPQNPVNQ QTPQQQPQKEPDTPKKNPMDPTDLATAATRRGSQQAGQQAAQQAGQQGAQQAAQQTTQGTQQATQQGTQKPVESGEQFPA DFHMGQLGDGLSKTGKYANTGTHWAPDAKVSTMSKSTAQNLLRAGEKFTWLGRGMEVAKAGVDLANGAPVPETVGSTVGS LAGAWAGAEGGAIIGASIGSFFPGPGTVIGGAVGGVIGGFVGSGLGSEVGKAAGGAVRAAGSALSKAGGAVASFFGSL
Sequences:
>Translated_718_residues MTDTDRPDGDDAPTQTLPAAAPLSAPELTGFPAGIVGAALTVLGVWGLHVLTRGDGVAGVLGWVILLCLAFSALGKGITL LRRALAPLSAVWSASVDGVPPLLRAAAGIIVGAAGIWWVMRGHASGWWAQITGGDSGSGLGWSLPSQLVQVAIMVVAGAL LFGGAKVLGKLIFANSGTRQQPSPNHDGGQRWRQWWASHPGLGLTLLAGGGALVFLSGYVVPRVSSWLTGDDPMAALAAI TAILALALLANTWWWRALSGWWAWAHTPNGPGGPTPIGQIYAGAGVLALIAFSATAFGLATFSSYLPQNAATASADPCGD RCGGGGNGQGSYGPDTGNFQPPQMPGQQPDYQGGINQPPLDQNSGISIYNESPGQGGQQIPQQNMGPQTSGQRAAHGEPL PNYGPWQPDAQPPAQAPVQQAPVQQAPQAPQQPAQAPQNPAGQQPAQQAPQQPAGQQPAQQNPPQQGQPGQQQPQNPVNQ QTPQQQPQKEPDTPKKNPMDPTDLATAATRRGSQQAGQQAAQQAGQQGAQQAAQQTTQGTQQATQQGTQKPVESGEQFPA DFHMGQLGDGLSKTGKYANTGTHWAPDAKVSTMSKSTAQNLLRAGEKFTWLGRGMEVAKAGVDLANGAPVPETVGSTVGS LAGAWAGAEGGAIIGASIGSFFPGPGTVIGGAVGGVIGGFVGSGLGSEVGKAAGGAVRAAGSALSKAGGAVASFFGSL >Mature_717_residues TDTDRPDGDDAPTQTLPAAAPLSAPELTGFPAGIVGAALTVLGVWGLHVLTRGDGVAGVLGWVILLCLAFSALGKGITLL RRALAPLSAVWSASVDGVPPLLRAAAGIIVGAAGIWWVMRGHASGWWAQITGGDSGSGLGWSLPSQLVQVAIMVVAGALL FGGAKVLGKLIFANSGTRQQPSPNHDGGQRWRQWWASHPGLGLTLLAGGGALVFLSGYVVPRVSSWLTGDDPMAALAAIT AILALALLANTWWWRALSGWWAWAHTPNGPGGPTPIGQIYAGAGVLALIAFSATAFGLATFSSYLPQNAATASADPCGDR CGGGGNGQGSYGPDTGNFQPPQMPGQQPDYQGGINQPPLDQNSGISIYNESPGQGGQQIPQQNMGPQTSGQRAAHGEPLP NYGPWQPDAQPPAQAPVQQAPVQQAPQAPQQPAQAPQNPAGQQPAQQAPQQPAGQQPAQQNPPQQGQPGQQQPQNPVNQQ TPQQQPQKEPDTPKKNPMDPTDLATAATRRGSQQAGQQAAQQAGQQGAQQAAQQTTQGTQQATQQGTQKPVESGEQFPAD FHMGQLGDGLSKTGKYANTGTHWAPDAKVSTMSKSTAQNLLRAGEKFTWLGRGMEVAKAGVDLANGAPVPETVGSTVGSL AGAWAGAEGGAIIGASIGSFFPGPGTVIGGAVGGVIGGFVGSGLGSEVGKAAGGAVRAAGSALSKAGGAVASFFGSL
Specific function: Unknown
COG id: COG3941
COG function: function code R; Mu-like prophage protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72804; Mature: 72673
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDTDRPDGDDAPTQTLPAAAPLSAPELTGFPAGIVGAALTVLGVWGLHVLTRGDGVAGV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHH LGWVILLCLAFSALGKGITLLRRALAPLSAVWSASVDGVPPLLRAAAGIIVGAAGIWWVM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH RGHASGWWAQITGGDSGSGLGWSLPSQLVQVAIMVVAGALLFGGAKVLGKLIFANSGTRQ HCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC QPSPNHDGGQRWRQWWASHPGLGLTLLAGGGALVFLSGYVVPRVSSWLTGDDPMAALAAI CCCCCCCHHHHHHHHHHCCCCCCEEEEECCCEEEHHHCHHHHHHHHHCCCCCHHHHHHHH TAILALALLANTWWWRALSGWWAWAHTPNGPGGPTPIGQIYAGAGVLALIAFSATAFGLA HHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH TFSSYLPQNAATASADPCGDRCGGGGNGQGSYGPDTGNFQPPQMPGQQPDYQGGINQPPL HHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DQNSGISIYNESPGQGGQQIPQQNMGPQTSGQRAAHGEPLPNYGPWQPDAQPPAQAPVQQ CCCCCEEEECCCCCCCHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH APVQQAPQAPQQPAQAPQNPAGQQPAQQAPQQPAGQQPAQQNPPQQGQPGQQQPQNPVNQ CCHHHCCCCCCCHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QTPQQQPQKEPDTPKKNPMDPTDLATAATRRGSQQAGQQAAQQAGQQGAQQAAQQTTQGT CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QQATQQGTQKPVESGEQFPADFHMGQLGDGLSKTGKYANTGTHWAPDAKVSTMSKSTAQN HHHHHHHHHHHHHCCCCCCCCCCCHHHCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH LLRAGEKFTWLGRGMEVAKAGVDLANGAPVPETVGSTVGSLAGAWAGAEGGAIIGASIGS HHHCCCCEEEHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECHHHC FFPGPGTVIGGAVGGVIGGFVGSGLGSEVGKAAGGAVRAAGSALSKAGGAVASFFGSL CCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TDTDRPDGDDAPTQTLPAAAPLSAPELTGFPAGIVGAALTVLGVWGLHVLTRGDGVAGV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHH LGWVILLCLAFSALGKGITLLRRALAPLSAVWSASVDGVPPLLRAAAGIIVGAAGIWWVM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH RGHASGWWAQITGGDSGSGLGWSLPSQLVQVAIMVVAGALLFGGAKVLGKLIFANSGTRQ HCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC QPSPNHDGGQRWRQWWASHPGLGLTLLAGGGALVFLSGYVVPRVSSWLTGDDPMAALAAI CCCCCCCHHHHHHHHHHCCCCCCEEEEECCCEEEHHHCHHHHHHHHHCCCCCHHHHHHHH TAILALALLANTWWWRALSGWWAWAHTPNGPGGPTPIGQIYAGAGVLALIAFSATAFGLA HHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH TFSSYLPQNAATASADPCGDRCGGGGNGQGSYGPDTGNFQPPQMPGQQPDYQGGINQPPL HHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DQNSGISIYNESPGQGGQQIPQQNMGPQTSGQRAAHGEPLPNYGPWQPDAQPPAQAPVQQ CCCCCEEEECCCCCCCHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH APVQQAPQAPQQPAQAPQNPAGQQPAQQAPQQPAGQQPAQQNPPQQGQPGQQQPQNPVNQ CCHHHCCCCCCCHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QTPQQQPQKEPDTPKKNPMDPTDLATAATRRGSQQAGQQAAQQAGQQGAQQAAQQTTQGT CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QQATQQGTQKPVESGEQFPADFHMGQLGDGLSKTGKYANTGTHWAPDAKVSTMSKSTAQN HHHHHHHHHHHHHCCCCCCCCCCCHHHCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH LLRAGEKFTWLGRGMEVAKAGVDLANGAPVPETVGSTVGSLAGAWAGAEGGAIIGASIGS HHHCCCCEEEHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECHHHC FFPGPGTVIGGAVGGVIGGFVGSGLGSEVGKAAGGAVRAAGSALSKAGGAVASFFGSL CCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA