| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627895
Identifier: 169627895
GI number: 169627895
Start: 786164
End: 786925
Strand: Direct
Name: 169627895
Synonym: MAB_0795
Alternate gene names: NA
Gene position: 786164-786925 (Clockwise)
Preceding gene: 169627894
Following gene: 169627900
Centisome position: 15.51
GC content: 65.62
Gene sequence:
>762_bases ATGGGTGATGGGCAGGAACCAGCGGACGTGGAAGCGACTGCGGTGCCGTGGCCACCGCGCCGCCGCCGGACGTTCGGTGT TCTCAGCGGGGTGGTGGTGCTGGCACTTTTCGTATTCGTTCCCGGCCCCGTCTCGGGGATCCTCAAGGCGAACAACGCCC GTCAGCTGGTTGACGACGTCTCCACCGGACGCGCAAAACTGCTCGCCAAACAGGACGAGTTCCGGCCACCGCTCGCGAGC TTAGGAAACCCGGCGCGCTCATGGACTCAGGTCTCGTGTTGGATGTCCCCGCGCTACAGCGACGGCGACGGTGAGCAGGA CGTGGTCATGTTCTACTGGCAACAATGCGCGCTCCTGGCCTACGAGATCTACGCGCTGCCGCCCGATGCCGATGACGCAG CGCAGGTCGCACAGCGCCTCCGTGGCCACTCTGCGGGTGAACCCTCCTGTGCCGAGCCACTCTTCGACGTGCTGACCCCC GACGTCGGTGCCAGCAGGATCGACGAGTTTGCGACAGGTCTCTGGTGGATGAATCCCGAAGGAGTACCGCCGTCTCATCA GCCGGACCGCTGCACGATGCCCACCCCGGACGACCCCGACACTGCACACACGCAAATAGGTATCGATGCCCGATTGGGCG CGGACGCCTACGTCGTCTACCAGGTCCGATCGCCAGTCAGCATGGTCGATGTGGGCTGCGACCGGCGACTGTCCTGGCTC GCGCCCTGCCGGGGAGAACCGGAGGGCTTCCCAACGCTGTGA
Upstream 100 bases:
>100_bases ACTGGCAGCCGTCGCCGCGGCATGGACCACAGTCGCCATCCTCGGTGCGCTCAGTTGAGGCGCGAAGGCCGGGTGCACCC GCGTCGATATCGTGGCGTGT
Downstream 100 bases:
>100_bases ACCGAGCAACGCGCTACAGCAGCTGCTCCGGCAGCGGGCCGCAGACGTCGACGAACGGACCCATCACCAGTTCGAAGACT CGGGCGTCGACGTCGTTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MGDGQEPADVEATAVPWPPRRRRTFGVLSGVVVLALFVFVPGPVSGILKANNARQLVDDVSTGRAKLLAKQDEFRPPLAS LGNPARSWTQVSCWMSPRYSDGDGEQDVVMFYWQQCALLAYEIYALPPDADDAAQVAQRLRGHSAGEPSCAEPLFDVLTP DVGASRIDEFATGLWWMNPEGVPPSHQPDRCTMPTPDDPDTAHTQIGIDARLGADAYVVYQVRSPVSMVDVGCDRRLSWL APCRGEPEGFPTL
Sequences:
>Translated_253_residues MGDGQEPADVEATAVPWPPRRRRTFGVLSGVVVLALFVFVPGPVSGILKANNARQLVDDVSTGRAKLLAKQDEFRPPLAS LGNPARSWTQVSCWMSPRYSDGDGEQDVVMFYWQQCALLAYEIYALPPDADDAAQVAQRLRGHSAGEPSCAEPLFDVLTP DVGASRIDEFATGLWWMNPEGVPPSHQPDRCTMPTPDDPDTAHTQIGIDARLGADAYVVYQVRSPVSMVDVGCDRRLSWL APCRGEPEGFPTL >Mature_252_residues GDGQEPADVEATAVPWPPRRRRTFGVLSGVVVLALFVFVPGPVSGILKANNARQLVDDVSTGRAKLLAKQDEFRPPLASL GNPARSWTQVSCWMSPRYSDGDGEQDVVMFYWQQCALLAYEIYALPPDADDAAQVAQRLRGHSAGEPSCAEPLFDVLTPD VGASRIDEFATGLWWMNPEGVPPSHQPDRCTMPTPDDPDTAHTQIGIDARLGADAYVVYQVRSPVSMVDVGCDRRLSWLA PCRGEPEGFPTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27578; Mature: 27447
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDGQEPADVEATAVPWPPRRRRTFGVLSGVVVLALFVFVPGPVSGILKANNARQLVDDV CCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHEECCCHHHHHHHH STGRAKLLAKQDEFRPPLASLGNPARSWTQVSCWMSPRYSDGDGEQDVVMFYWQQCALLA HCCHHHHHHCCHHCCCCHHHCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHH YEIYALPPDADDAAQVAQRLRGHSAGEPSCAEPLFDVLTPDVGASRIDEFATGLWWMNPE HHEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCEEEECCC GVPPSHQPDRCTMPTPDDPDTAHTQIGIDARLGADAYVVYQVRSPVSMVDVGCDRRLSWL CCCCCCCCCCCCCCCCCCCCCCCEEECCEEECCCCEEEEEEECCCHHEECCCCCCCCHHH APCRGEPEGFPTL CCCCCCCCCCCCC >Mature Secondary Structure GDGQEPADVEATAVPWPPRRRRTFGVLSGVVVLALFVFVPGPVSGILKANNARQLVDDV CCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHEECCCHHHHHHHH STGRAKLLAKQDEFRPPLASLGNPARSWTQVSCWMSPRYSDGDGEQDVVMFYWQQCALLA HCCHHHHHHCCHHCCCCHHHCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHH YEIYALPPDADDAAQVAQRLRGHSAGEPSCAEPLFDVLTPDVGASRIDEFATGLWWMNPE HHEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCEEEECCC GVPPSHQPDRCTMPTPDDPDTAHTQIGIDARLGADAYVVYQVRSPVSMVDVGCDRRLSWL CCCCCCCCCCCCCCCCCCCCCCCEEECCEEECCCCEEEEEEECCCHHEECCCCCCCCHHH APCRGEPEGFPTL CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA