| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627880
Identifier: 169627880
GI number: 169627880
Start: 775545
End: 776084
Strand: Direct
Name: 169627880
Synonym: MAB_0779
Alternate gene names: NA
Gene position: 775545-776084 (Clockwise)
Preceding gene: 169627879
Following gene: 169627881
Centisome position: 15.31
GC content: 65.56
Gene sequence:
>540_bases GTGGCTGATGGTGTAGCTCAGCGGCGGTGGACCGCTGACGAGCTGGCAGTGGCGCTGGACCGGTCACTATCGTGCGCCGA GGCTGGCGCGAGGTTGGGCCGCACCCGGCTACAGGTGGAGAAGGCTCGAAAGCGGTACCGGGGACGCGATATTGAGCAAC TGCTCGCCCAGAAACGTGGTCGCGCTGCCGAGCTAGAGCAGGTAGCCGAGACCGACATCGCCTGCTATGGGTCATGGACA CCACAGGAGATCGCGATCGCACTGGATCGGTCGATTTCCCGCACTGAAGCGGCCCGCCGGTTGGGGCGTTCCTTCAGGGC GATCAAGCACATTCGAGACCTGCAGCGCCAAAAGGCCTCGGGTTTGATCCCGGCGCGCGAGTCGCGCGCGGAGCCGATAC GGCAGCGCCTCTGGACCGAGGATGAGATCGCTGTCCTGGCCGATGAGTCCCGCACACCTACGGAGATTGCCGCCTTCGAT CAATTCGGTCACTGTGGCTCGTGCGCGGTGGCTGGGGCGCCTGCAGGGCAAGGTCCCTGA
Upstream 100 bases:
>100_bases TTCAATACGATTGATACCAGCCGCTGTCTTTTCGGCGGGTTTGCACATCCGGTGCGCCGGTTCACGGTATGTACGGAGAC CCAGAAGTAGCCTGTCATGT
Downstream 100 bases:
>100_bases ACATCTGCACGGAACCAACACGGGCGTGAGCCGATACGGATGCCTATGTCCGCGGTGCCGGGACGCGGCCGAAGCAGAGC GGGAGCGACGCCAAGAGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MADGVAQRRWTADELAVALDRSLSCAEAGARLGRTRLQVEKARKRYRGRDIEQLLAQKRGRAAELEQVAETDIACYGSWT PQEIAIALDRSISRTEAARRLGRSFRAIKHIRDLQRQKASGLIPARESRAEPIRQRLWTEDEIAVLADESRTPTEIAAFD QFGHCGSCAVAGAPAGQGP
Sequences:
>Translated_179_residues MADGVAQRRWTADELAVALDRSLSCAEAGARLGRTRLQVEKARKRYRGRDIEQLLAQKRGRAAELEQVAETDIACYGSWT PQEIAIALDRSISRTEAARRLGRSFRAIKHIRDLQRQKASGLIPARESRAEPIRQRLWTEDEIAVLADESRTPTEIAAFD QFGHCGSCAVAGAPAGQGP >Mature_178_residues ADGVAQRRWTADELAVALDRSLSCAEAGARLGRTRLQVEKARKRYRGRDIEQLLAQKRGRAAELEQVAETDIACYGSWTP QEIAIALDRSISRTEAARRLGRSFRAIKHIRDLQRQKASGLIPARESRAEPIRQRLWTEDEIAVLADESRTPTEIAAFDQ FGHCGSCAVAGAPAGQGP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19766; Mature: 19634
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADGVAQRRWTADELAVALDRSLSCAEAGARLGRTRLQVEKARKRYRGRDIEQLLAQKRG CCCCHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC RAAELEQVAETDIACYGSWTPQEIAIALDRSISRTEAARRLGRSFRAIKHIRDLQRQKAS CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GLIPARESRAEPIRQRLWTEDEIAVLADESRTPTEIAAFDQFGHCGSCAVAGAPAGQGP CCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ADGVAQRRWTADELAVALDRSLSCAEAGARLGRTRLQVEKARKRYRGRDIEQLLAQKRG CCCHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC RAAELEQVAETDIACYGSWTPQEIAIALDRSISRTEAARRLGRSFRAIKHIRDLQRQKAS CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GLIPARESRAEPIRQRLWTEDEIAVLADESRTPTEIAAFDQFGHCGSCAVAGAPAGQGP CCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA