| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627876
Identifier: 169627876
GI number: 169627876
Start: 773145
End: 774329
Strand: Direct
Name: 169627876
Synonym: MAB_0775
Alternate gene names: NA
Gene position: 773145-774329 (Clockwise)
Preceding gene: 169627874
Following gene: 169627877
Centisome position: 15.26
GC content: 59.66
Gene sequence:
>1185_bases ATGGTCATGAAGGAGCGTTGGACGATGCCAGCGGGTTTGCGGCGAGCCTCGGCGCTGGTGGCAATTGTCGCTTTGGCTGT CGGTGGAGCGAAGGTTATCGACGGCCACACCGTCGCTGGTAGCGGCTTTTCGGCGGTCGCGACCGTGGCAGCTGATCCCA CTGGCGGCCCAACAGGCGGGCCTGGCAGCGGGCCCGGAGGAATGAATGGAAGTCAGTTTCAGCCACCTTCTGCGCCTCAG CAGATGCCCGACTATCAGGGTGGAAACAACTTGCCGCCGCTAGATCAGAATGGCGGAATCAGCATCTATAACAGCGGGGT TCAAGGTGCCCCGCAACAGGCGCCGGGTGAGCAAAGCGCGCAACAGCCTCAGCAGGGCTGGGATCAGCCCGCTCATGGGA ATCAGATTCCTGACTATCAAACGAATCCCGGGTTCACCCAAGGCCCCGGTAAGCCCAACCCGGACGCTCAAGCGCCTCAG CAAGGCAACCAGCCTCAGCAGGGTCAGCAGCAGCCGAGTCAAGCCCCGACACAACAGCAGCAGCCGGGGCAGGAGCGCGA TAGTGATCGAATTCGGGATTTCTCCGAGAGGTGCAGTCTGGCGTCTGATGTGCTGCAGTCGGGAAGTGTGCCGGTCTCGC TGATCGGTGCGGCAGGGGGCGCCTTGGTGAATGCGCGCCTCGAGCCTGGTCGGGACCCGAGTATTCCGATTTGCCCGGAC TGTAACCCACCGGTTCTTAAGCAATTCACTGATGGGGACAATCCGCTGGATCAGTTGTGGCGGGATGTGCTCAAAAAGTA CGTCGACGAGAAGATGGATGAAGCCAAAGAAGAGGCCATTGACAGTGCTTTGGAGCCGTTGAAGAAGTGGCTCTCGGAGA ACTCGACGGCGGACTGCGGTATCACCTCATGCTCGGTCTATTTCCACAAGAACGTAACGAAGTGGCTTAAGGACAACGCA GCACTTACTGCTCTTGCTCCGGCGGTAAGCGGCTATATCCTGTGCACTGTCGTCGGCGCTAAAACTAACGCGTATGTGGG TGGCGCATGCGGATTGGCGAATACCGCCAGCTGGGCTTTTCTTATCAATGCCATCAACCGTGCGGGCGACGGCACTGGTT GCCTGCGCGTGCGTGCGGGTATCCCTGCCGGGTATTACGCTGATCATTCGGGGTTCTGTGTATGA
Upstream 100 bases:
>100_bases CTAACTCTTTAGCTGGGGTTTTCTCGACATGGCAACCATATGTGTGTAATGATCTGCCCAGGGGCGCGTTCAGCGTCGGC TGAAAGGGGCGGTTGTATTC
Downstream 100 bases:
>100_bases GCAAGCAGCTTATGAGGAGATATGCCGTCGCGTTTGGTGCCGTGGCCGTGCTGGTGGGATGCTCCGCCCCCGAAGAGGGT GCGGGGGAAGTCCCTGCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MVMKERWTMPAGLRRASALVAIVALAVGGAKVIDGHTVAGSGFSAVATVAADPTGGPTGGPGSGPGGMNGSQFQPPSAPQ QMPDYQGGNNLPPLDQNGGISIYNSGVQGAPQQAPGEQSAQQPQQGWDQPAHGNQIPDYQTNPGFTQGPGKPNPDAQAPQ QGNQPQQGQQQPSQAPTQQQQPGQERDSDRIRDFSERCSLASDVLQSGSVPVSLIGAAGGALVNARLEPGRDPSIPICPD CNPPVLKQFTDGDNPLDQLWRDVLKKYVDEKMDEAKEEAIDSALEPLKKWLSENSTADCGITSCSVYFHKNVTKWLKDNA ALTALAPAVSGYILCTVVGAKTNAYVGGACGLANTASWAFLINAINRAGDGTGCLRVRAGIPAGYYADHSGFCV
Sequences:
>Translated_394_residues MVMKERWTMPAGLRRASALVAIVALAVGGAKVIDGHTVAGSGFSAVATVAADPTGGPTGGPGSGPGGMNGSQFQPPSAPQ QMPDYQGGNNLPPLDQNGGISIYNSGVQGAPQQAPGEQSAQQPQQGWDQPAHGNQIPDYQTNPGFTQGPGKPNPDAQAPQ QGNQPQQGQQQPSQAPTQQQQPGQERDSDRIRDFSERCSLASDVLQSGSVPVSLIGAAGGALVNARLEPGRDPSIPICPD CNPPVLKQFTDGDNPLDQLWRDVLKKYVDEKMDEAKEEAIDSALEPLKKWLSENSTADCGITSCSVYFHKNVTKWLKDNA ALTALAPAVSGYILCTVVGAKTNAYVGGACGLANTASWAFLINAINRAGDGTGCLRVRAGIPAGYYADHSGFCV >Mature_394_residues MVMKERWTMPAGLRRASALVAIVALAVGGAKVIDGHTVAGSGFSAVATVAADPTGGPTGGPGSGPGGMNGSQFQPPSAPQ QMPDYQGGNNLPPLDQNGGISIYNSGVQGAPQQAPGEQSAQQPQQGWDQPAHGNQIPDYQTNPGFTQGPGKPNPDAQAPQ QGNQPQQGQQQPSQAPTQQQQPGQERDSDRIRDFSERCSLASDVLQSGSVPVSLIGAAGGALVNARLEPGRDPSIPICPD CNPPVLKQFTDGDNPLDQLWRDVLKKYVDEKMDEAKEEAIDSALEPLKKWLSENSTADCGITSCSVYFHKNVTKWLKDNA ALTALAPAVSGYILCTVVGAKTNAYVGGACGLANTASWAFLINAINRAGDGTGCLRVRAGIPAGYYADHSGFCV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41042; Mature: 41042
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVMKERWTMPAGLRRASALVAIVALAVGGAKVIDGHTVAGSGFSAVATVAADPTGGPTGG CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCEECCCCHHHEEEEECCCCCCCCCC PGSGPGGMNGSQFQPPSAPQQMPDYQGGNNLPPLDQNGGISIYNSGVQGAPQQAPGEQSA CCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHH QQPQQGWDQPAHGNQIPDYQTNPGFTQGPGKPNPDAQAPQQGNQPQQGQQQPSQAPTQQQ HCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHC QPGQERDSDRIRDFSERCSLASDVLQSGSVPVSLIGAAGGALVNARLEPGRDPSIPICPD CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCC CNPPVLKQFTDGDNPLDQLWRDVLKKYVDEKMDEAKEEAIDSALEPLKKWLSENSTADCG CCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC ITSCSVYFHKNVTKWLKDNAALTALAPAVSGYILCTVVGAKTNAYVGGACGLANTASWAF CEEEEEEHHHHHHHHHHCCCHHHHHHHHHCCEEEEEEECCCCCCEECCCCCCCCHHHHHH LINAINRAGDGTGCLRVRAGIPAGYYADHSGFCV HHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MVMKERWTMPAGLRRASALVAIVALAVGGAKVIDGHTVAGSGFSAVATVAADPTGGPTGG CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCEECCCCHHHEEEEECCCCCCCCCC PGSGPGGMNGSQFQPPSAPQQMPDYQGGNNLPPLDQNGGISIYNSGVQGAPQQAPGEQSA CCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHH QQPQQGWDQPAHGNQIPDYQTNPGFTQGPGKPNPDAQAPQQGNQPQQGQQQPSQAPTQQQ HCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHC QPGQERDSDRIRDFSERCSLASDVLQSGSVPVSLIGAAGGALVNARLEPGRDPSIPICPD CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCC CNPPVLKQFTDGDNPLDQLWRDVLKKYVDEKMDEAKEEAIDSALEPLKKWLSENSTADCG CCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC ITSCSVYFHKNVTKWLKDNAALTALAPAVSGYILCTVVGAKTNAYVGGACGLANTASWAF CEEEEEEHHHHHHHHHHCCCHHHHHHHHHCCEEEEEEECCCCCCEECCCCCCCCHHHHHH LINAINRAGDGTGCLRVRAGIPAGYYADHSGFCV HHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA