| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627863
Identifier: 169627863
GI number: 169627863
Start: 762060
End: 763208
Strand: Direct
Name: 169627863
Synonym: MAB_0762
Alternate gene names: NA
Gene position: 762060-763208 (Clockwise)
Preceding gene: 169627859
Following gene: 169627866
Centisome position: 15.04
GC content: 65.45
Gene sequence:
>1149_bases GTGGGCGAGCAGCTACTGGCCCGGGTGGACGAACTTTGTGCCGAACAGTGTCGGATCATTCGTGAGCGGGTGGCCGCGTA CCGCGACCCGGTGTTGGTCACCGATGAGGATTTGTTTGCGGCCGGCCGTGACCAGATGGTGTACGTCTTGGCGGCGATGG GCTCGGGGGCACCTGACACGAGCGCGGCGGCCCGGGTGGGCAGGCTGCGCGCTGAACAAGGTGTGCCCCTGGCCGACGTG ATGTCGGCCTACCGGGCCGGGGGCCAGTTCCTGTGGGACGCACTTTCACAGGCTATTGATGCGGCGGGCTTGTCTCGGCA GGAGCTGCGAGCCGCGGCGTCGCAGGCGTGGCAGAACCACGACAGGTACACGGACGCGATGGCTGAGGGATATCGCGATG TCGTTGTCGAGCAGCTCATCCAGCGGGACCAGGAACGTGCCGCCCTGGTGAGTGGCCTCATTGACGGGCGCTTCCCGGCG GGGATAACCGCCTGGAACGCGGCGCATCAGCTGGGATTACCGGAATCCGGGGCCTTCGTCGTGGTCGCTATCGAATCGGG TCCGCTCGACTACCGGACATTGCGGAGCGCGGAGAAGGCCTTGCGTGACCAGGGGTTCGCTTCGGCATGGCGGGTCGACC CCGACATGCAGGTGGGTATCGTCGCGCTCCCCACGCCTTCGCGGCTCGAGGAGCTCGGTGAGACCTTGCGTAATCTTGGT GTACGACGTATCGGCGTCAGTCCGGTATACGACGGTTATCCGCCGCCGGGCCCGCCTCTGAACTACGCGAAGGCGGCGTT GCTTGCGGCCACCGAGGATGACCCGGTGGTGGCGTTTGACGCGAATCCCTATGCCGTTGCCGCCATTACCGATCCACAGA CCATGGCACGGTACCGCGATCTGGTGCTGGGCAGTCTTACCGAGATCGGAGTAGTGGACCGCCAGTTGCTCGTGGACACC TTCCGGCAGTGGGTGGACTGCGACGGCTCCATCCCCGCCACAGCGAGGGTGTTGTTCTGTCATCCGAATACCGTGAGGTA CCGGCTGCGCAGGCTAAAACAATTGACCGGGCGTGATGTCGCCCGGCCGCGCGACATCGCTGAACTCCATCTCGCCGTCG AGGCCGATCGTCGGCTGAGCTGGGCTTAG
Upstream 100 bases:
>100_bases TGAGATTGTTCATTTGAACAATTCGCCGCGGAGATAAAGCGCTATCCTTGGGACCGTGAGTGAATCACCCTCAGGTAGTG CAGGAGCAAACTTGAAAACG
Downstream 100 bases:
>100_bases CCGCGTACGGGCAGCGGCTCGACGCCCACCAGCGCACAGCTCTTAGCGTAGAGGTTATCTTGTGCCGCTAGGTTTTTCGT GTAGCGGCGTACCGGGCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulator PucR Family; Regulatory Protein; Transcriptional Regulator CdaR; CdaR Family Transcriptional Regulator; PE-PGRS Family Protein
Number of amino acids: Translated: 382; Mature: 381
Protein sequence:
>382_residues MGEQLLARVDELCAEQCRIIRERVAAYRDPVLVTDEDLFAAGRDQMVYVLAAMGSGAPDTSAAARVGRLRAEQGVPLADV MSAYRAGGQFLWDALSQAIDAAGLSRQELRAAASQAWQNHDRYTDAMAEGYRDVVVEQLIQRDQERAALVSGLIDGRFPA GITAWNAAHQLGLPESGAFVVVAIESGPLDYRTLRSAEKALRDQGFASAWRVDPDMQVGIVALPTPSRLEELGETLRNLG VRRIGVSPVYDGYPPPGPPLNYAKAALLAATEDDPVVAFDANPYAVAAITDPQTMARYRDLVLGSLTEIGVVDRQLLVDT FRQWVDCDGSIPATARVLFCHPNTVRYRLRRLKQLTGRDVARPRDIAELHLAVEADRRLSWA
Sequences:
>Translated_382_residues MGEQLLARVDELCAEQCRIIRERVAAYRDPVLVTDEDLFAAGRDQMVYVLAAMGSGAPDTSAAARVGRLRAEQGVPLADV MSAYRAGGQFLWDALSQAIDAAGLSRQELRAAASQAWQNHDRYTDAMAEGYRDVVVEQLIQRDQERAALVSGLIDGRFPA GITAWNAAHQLGLPESGAFVVVAIESGPLDYRTLRSAEKALRDQGFASAWRVDPDMQVGIVALPTPSRLEELGETLRNLG VRRIGVSPVYDGYPPPGPPLNYAKAALLAATEDDPVVAFDANPYAVAAITDPQTMARYRDLVLGSLTEIGVVDRQLLVDT FRQWVDCDGSIPATARVLFCHPNTVRYRLRRLKQLTGRDVARPRDIAELHLAVEADRRLSWA >Mature_381_residues GEQLLARVDELCAEQCRIIRERVAAYRDPVLVTDEDLFAAGRDQMVYVLAAMGSGAPDTSAAARVGRLRAEQGVPLADVM SAYRAGGQFLWDALSQAIDAAGLSRQELRAAASQAWQNHDRYTDAMAEGYRDVVVEQLIQRDQERAALVSGLIDGRFPAG ITAWNAAHQLGLPESGAFVVVAIESGPLDYRTLRSAEKALRDQGFASAWRVDPDMQVGIVALPTPSRLEELGETLRNLGV RRIGVSPVYDGYPPPGPPLNYAKAALLAATEDDPVVAFDANPYAVAAITDPQTMARYRDLVLGSLTEIGVVDRQLLVDTF RQWVDCDGSIPATARVLFCHPNTVRYRLRRLKQLTGRDVARPRDIAELHLAVEADRRLSWA
Specific function: Unknown
COG id: COG2508
COG function: function code TQ; Regulator of polyketide synthase expression
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41805; Mature: 41674
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEQLLARVDELCAEQCRIIRERVAAYRDPVLVTDEDLFAAGRDQMVYVLAAMGSGAPDT CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHCCCCCEEEEEEECCCCCCCH SAAARVGRLRAEQGVPLADVMSAYRAGGQFLWDALSQAIDAAGLSRQELRAAASQAWQNH HHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC DRYTDAMAEGYRDVVVEQLIQRDQERAALVSGLIDGRFPAGITAWNAAHQLGLPESGAFV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCEE VVAIESGPLDYRTLRSAEKALRDQGFASAWRVDPDMQVGIVALPTPSRLEELGETLRNLG EEEECCCCCCHHHHHHHHHHHHHCCCCHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHCC VRRIGVSPVYDGYPPPGPPLNYAKAALLAATEDDPVVAFDANPYAVAAITDPQTMARYRD CEEECCCCCCCCCCCCCCCCCHHHHHHEEECCCCCEEEECCCCEEEEEECCHHHHHHHHH LVLGSLTEIGVVDRQLLVDTFRQWVDCDGSIPATARVLFCHPNTVRYRLRRLKQLTGRDV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCC ARPRDIAELHLAVEADRRLSWA CCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure GEQLLARVDELCAEQCRIIRERVAAYRDPVLVTDEDLFAAGRDQMVYVLAAMGSGAPDT CHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHCCCCCEEEEEEECCCCCCCH SAAARVGRLRAEQGVPLADVMSAYRAGGQFLWDALSQAIDAAGLSRQELRAAASQAWQNH HHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC DRYTDAMAEGYRDVVVEQLIQRDQERAALVSGLIDGRFPAGITAWNAAHQLGLPESGAFV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCEE VVAIESGPLDYRTLRSAEKALRDQGFASAWRVDPDMQVGIVALPTPSRLEELGETLRNLG EEEECCCCCCHHHHHHHHHHHHHCCCCHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHCC VRRIGVSPVYDGYPPPGPPLNYAKAALLAATEDDPVVAFDANPYAVAAITDPQTMARYRD CEEECCCCCCCCCCCCCCCCCHHHHHHEEECCCCCEEEECCCCEEEEEECCHHHHHHHHH LVLGSLTEIGVVDRQLLVDTFRQWVDCDGSIPATARVLFCHPNTVRYRLRRLKQLTGRDV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCC ARPRDIAELHLAVEADRRLSWA CCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA