| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is menE [H]
Identifier: 169627764
GI number: 169627764
Start: 663692
End: 665098
Strand: Direct
Name: menE [H]
Synonym: MAB_0661
Alternate gene names: 169627764
Gene position: 663692-665098 (Clockwise)
Preceding gene: 169627763
Following gene: 169627765
Centisome position: 13.1
GC content: 62.76
Gene sequence:
>1407_bases ATGAGCTACGGTGAGCTCATCGGTGCCGTCGAAGACCTGGCCGCGACACTTGAAGCCGGCTCGGTCACGCACGGTTCGCG TGTCGTCGTCCTCTCGGACAATGGACCCCAGACATATCTTTCGGTACTGGCATGTGCCCGGCTCGGCGCCATCGCGGTCA TGGTTGACGATTCCTTGCCCGCGGCGACTGTCGCGCGGTTCAGTGAGATAACCCGGCCTGCTGCCATCATTCCGAACGAG GGCGGTGGTGTCGGTGCCGAAAATGGCGAAAGAGCTTATCCGAAGGCGCAACCCGACAGTGGTGCGGACGAAGCGCTCGC GATGATCTTCACCAGCGGCACCACCGGTGAGCCGAAGGCCGTGCTGCTGCCCAATCGGACGTTCTTCGCTATTCCGGACA TTCTGCGCGCCGAGGGACTGCGCTGGATCGATTGGGTAGCGGGGGAGACAACCTACTCACCGCTGCCGGCGACGCATATC GGCGGGCTGTGGTGGATCCTCAATGGGCTGATGCACGGTGCTTCGTGCATCACCGGTGGCGAGCAGGGAGCGTCGCTGCG GGAACTACTTGTCGACAATGAGGTGGCCACCGCGTGTCTGGTGCCTACTCTCCTCACCAGATTGGTCTCGGAACTCAAGC TCACCGGTACGGATGTTCCCGCATTGCGCTTCATTGCCTACGGCGGTTCACGGGCGATAGCCGCCGATGTGAGGTTCATC GAAGCAGCCGGAGTGCGGACGGCTCAGGTTTATGGGCTGAGTGAAACAGGCTGTACCGCATTATGTCTGCCGACAGATAG CGAATCCATTTCCAGGATTGAACAGGGGGCTGTGGGCCGCCCCTACCCGGGCGTGCAAACCTACCTTTCCCCTGAGGGCG GGGGCGACCCGACCACGGGTGCCGAGTCCGCCTCCTACGGCACATTGTGGATCAAGTCGCCGGCCAACATGCTGGGGTAC TGGGGAAGCCCCGAGCGCACCGGCGAGGTGCTGGCCGAAGGCTGGGTGAACACCGGTGATCTGGTGGAGCGTCGTGCCGA CGGGTTCTTCTATATCAGGGGACGCTCGTCGGAAATGATCATCTCTGGCGGTGTCAACGTGGTTCCCGATGAGGTCGACC GGATCGCTGAGGACATAGCGGGTGTGCGTGAAGCGGCGTGTTACGAGATACCCGACGAGGAATTCGGAGCACTGGTCGGA TTGGCCGTAGTTGCCACCACCGAACTCGATGGTGCGGGCACCGCGGCGTTGAAGCAGCGGATCGCGGCCAGGTATCGGCG TGAGTCGGAGTCGATGGCCAGGCCGTCGACCATCGTCCTGGTTGAGGACATCCCCCGGACCAAATCCGGCAAGGTGATGC GTTCAGCGTTGTCCGCCTCGCTCAACGGGGCACGTGCGCGTGTCTGA
Upstream 100 bases:
>100_bases GTCTCATTCGCCACCGCCCACCGTGCTGGAACGAATCGTCGCACAGGCCCGGACACGGCCGGATTCAATCGCGTTGCGTC GCTGCGATGGTCGTGACGCC
Downstream 100 bases:
>100_bases AACTACGAGGGACCGGATTCTGGCGGCAGTGTGCGAGGTGCTGTACATCTCGGAAGCTGATCTCTTTGAAGGCGATTCGA CCGATCTGCGGGAGCTGGGC
Product: acyl-CoA synthetase
Products: NA
Alternate protein names: OSB-CoA synthetase; o-succinylbenzoyl-CoA synthetase [H]
Number of amino acids: Translated: 468; Mature: 467
Protein sequence:
>468_residues MSYGELIGAVEDLAATLEAGSVTHGSRVVVLSDNGPQTYLSVLACARLGAIAVMVDDSLPAATVARFSEITRPAAIIPNE GGGVGAENGERAYPKAQPDSGADEALAMIFTSGTTGEPKAVLLPNRTFFAIPDILRAEGLRWIDWVAGETTYSPLPATHI GGLWWILNGLMHGASCITGGEQGASLRELLVDNEVATACLVPTLLTRLVSELKLTGTDVPALRFIAYGGSRAIAADVRFI EAAGVRTAQVYGLSETGCTALCLPTDSESISRIEQGAVGRPYPGVQTYLSPEGGGDPTTGAESASYGTLWIKSPANMLGY WGSPERTGEVLAEGWVNTGDLVERRADGFFYIRGRSSEMIISGGVNVVPDEVDRIAEDIAGVREAACYEIPDEEFGALVG LAVVATTELDGAGTAALKQRIAARYRRESESMARPSTIVLVEDIPRTKSGKVMRSALSASLNGARARV
Sequences:
>Translated_468_residues MSYGELIGAVEDLAATLEAGSVTHGSRVVVLSDNGPQTYLSVLACARLGAIAVMVDDSLPAATVARFSEITRPAAIIPNE GGGVGAENGERAYPKAQPDSGADEALAMIFTSGTTGEPKAVLLPNRTFFAIPDILRAEGLRWIDWVAGETTYSPLPATHI GGLWWILNGLMHGASCITGGEQGASLRELLVDNEVATACLVPTLLTRLVSELKLTGTDVPALRFIAYGGSRAIAADVRFI EAAGVRTAQVYGLSETGCTALCLPTDSESISRIEQGAVGRPYPGVQTYLSPEGGGDPTTGAESASYGTLWIKSPANMLGY WGSPERTGEVLAEGWVNTGDLVERRADGFFYIRGRSSEMIISGGVNVVPDEVDRIAEDIAGVREAACYEIPDEEFGALVG LAVVATTELDGAGTAALKQRIAARYRRESESMARPSTIVLVEDIPRTKSGKVMRSALSASLNGARARV >Mature_467_residues SYGELIGAVEDLAATLEAGSVTHGSRVVVLSDNGPQTYLSVLACARLGAIAVMVDDSLPAATVARFSEITRPAAIIPNEG GGVGAENGERAYPKAQPDSGADEALAMIFTSGTTGEPKAVLLPNRTFFAIPDILRAEGLRWIDWVAGETTYSPLPATHIG GLWWILNGLMHGASCITGGEQGASLRELLVDNEVATACLVPTLLTRLVSELKLTGTDVPALRFIAYGGSRAIAADVRFIE AAGVRTAQVYGLSETGCTALCLPTDSESISRIEQGAVGRPYPGVQTYLSPEGGGDPTTGAESASYGTLWIKSPANMLGYW GSPERTGEVLAEGWVNTGDLVERRADGFFYIRGRSSEMIISGGVNVVPDEVDRIAEDIAGVREAACYEIPDEEFGALVGL AVVATTELDGAGTAALKQRIAARYRRESESMARPSTIVLVEDIPRTKSGKVMRSALSASLNGARARV
Specific function: Converts 2-succinylbenzoate (OSB) to 2-succinylbenzoyl- CoA (OSB-CoA) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Partially Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily [H]
Homologues:
Organism=Homo sapiens, GI187761345, Length=409, Percent_Identity=28.8508557457213, Blast_Score=101, Evalue=1e-21, Organism=Homo sapiens, GI187761343, Length=409, Percent_Identity=28.8508557457213, Blast_Score=101, Evalue=1e-21, Organism=Homo sapiens, GI38505220, Length=371, Percent_Identity=26.1455525606469, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI156151445, Length=371, Percent_Identity=27.7628032345013, Blast_Score=93, Evalue=4e-19, Organism=Homo sapiens, GI42544132, Length=499, Percent_Identity=21.8436873747495, Blast_Score=93, Evalue=4e-19, Organism=Homo sapiens, GI122937307, Length=375, Percent_Identity=22.4, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI115511026, Length=265, Percent_Identity=23.7735849056604, Blast_Score=67, Evalue=4e-11, Organism=Escherichia coli, GI1788107, Length=396, Percent_Identity=25.2525252525253, Blast_Score=109, Evalue=5e-25, Organism=Escherichia coli, GI145693145, Length=378, Percent_Identity=27.5132275132275, Blast_Score=100, Evalue=3e-22, Organism=Escherichia coli, GI1788595, Length=480, Percent_Identity=26.0416666666667, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI1790505, Length=528, Percent_Identity=22.7272727272727, Blast_Score=75, Evalue=8e-15, Organism=Escherichia coli, GI1786810, Length=502, Percent_Identity=22.7091633466135, Blast_Score=75, Evalue=1e-14, Organism=Caenorhabditis elegans, GI32563687, Length=476, Percent_Identity=24.7899159663866, Blast_Score=126, Evalue=2e-29, Organism=Caenorhabditis elegans, GI17558820, Length=496, Percent_Identity=25.8064516129032, Blast_Score=124, Evalue=1e-28, Organism=Caenorhabditis elegans, GI71996755, Length=481, Percent_Identity=24.1164241164241, Blast_Score=103, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17531443, Length=381, Percent_Identity=26.7716535433071, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17560308, Length=361, Percent_Identity=26.0387811634349, Blast_Score=100, Evalue=3e-21, Organism=Caenorhabditis elegans, GI17559526, Length=450, Percent_Identity=23.7777777777778, Blast_Score=94, Evalue=2e-19, Organism=Caenorhabditis elegans, GI71994694, Length=385, Percent_Identity=25.1948051948052, Blast_Score=92, Evalue=5e-19, Organism=Caenorhabditis elegans, GI71994703, Length=385, Percent_Identity=25.1948051948052, Blast_Score=92, Evalue=5e-19, Organism=Caenorhabditis elegans, GI71994690, Length=385, Percent_Identity=25.1948051948052, Blast_Score=92, Evalue=6e-19, Organism=Caenorhabditis elegans, GI25141359, Length=375, Percent_Identity=24, Blast_Score=80, Evalue=3e-15, Organism=Caenorhabditis elegans, GI71985884, Length=358, Percent_Identity=24.8603351955307, Blast_Score=79, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6323182, Length=552, Percent_Identity=26.0869565217391, Blast_Score=86, Evalue=2e-17, Organism=Saccharomyces cerevisiae, GI6319699, Length=369, Percent_Identity=23.8482384823848, Blast_Score=75, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6319264, Length=410, Percent_Identity=24.8780487804878, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI18859661, Length=382, Percent_Identity=25.130890052356, Blast_Score=96, Evalue=6e-20, Organism=Drosophila melanogaster, GI24581924, Length=373, Percent_Identity=27.3458445040214, Blast_Score=92, Evalue=1e-18, Organism=Drosophila melanogaster, GI21356441, Length=389, Percent_Identity=24.6786632390745, Blast_Score=89, Evalue=4e-18, Organism=Drosophila melanogaster, GI24648260, Length=372, Percent_Identity=23.3870967741935, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI24648255, Length=395, Percent_Identity=24.8101265822785, Blast_Score=87, Evalue=3e-17, Organism=Drosophila melanogaster, GI24653035, Length=382, Percent_Identity=23.8219895287958, Blast_Score=86, Evalue=8e-17, Organism=Drosophila melanogaster, GI24648253, Length=395, Percent_Identity=24.8101265822785, Blast_Score=85, Evalue=1e-16, Organism=Drosophila melanogaster, GI161076582, Length=400, Percent_Identity=23, Blast_Score=85, Evalue=1e-16, Organism=Drosophila melanogaster, GI21355181, Length=389, Percent_Identity=25.9640102827763, Blast_Score=83, Evalue=5e-16, Organism=Drosophila melanogaster, GI21356947, Length=376, Percent_Identity=24.7340425531915, Blast_Score=83, Evalue=5e-16, Organism=Drosophila melanogaster, GI20130357, Length=389, Percent_Identity=23.1362467866324, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI21358303, Length=342, Percent_Identity=23.6842105263158, Blast_Score=75, Evalue=8e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020845 - InterPro: IPR000873 - InterPro: IPR010192 - InterPro: IPR023015 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.26 [H]
Molecular weight: Translated: 49151; Mature: 49020
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYGELIGAVEDLAATLEAGSVTHGSRVVVLSDNGPQTYLSVLACARLGAIAVMVDDSLP CCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCEEEEEEECCCC AATVARFSEITRPAAIIPNEGGGVGAENGERAYPKAQPDSGADEALAMIFTSGTTGEPKA HHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCE VLLPNRTFFAIPDILRAEGLRWIDWVAGETTYSPLPATHIGGLWWILNGLMHGASCITGG EEECCCCEEECCHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC EQGASLRELLVDNEVATACLVPTLLTRLVSELKLTGTDVPALRFIAYGGSRAIAADVRFI CCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEHHHEEH EAAGVRTAQVYGLSETGCTALCLPTDSESISRIEQGAVGRPYPGVQTYLSPEGGGDPTTG HHCCCEEEEEEECCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCC AESASYGTLWIKSPANMLGYWGSPERTGEVLAEGWVNTGDLVERRADGFFYIRGRSSEMI CCCCCCCEEEEECCHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHCCCCEEEEECCCCCEE ISGGVNVVPDEVDRIAEDIAGVREAACYEIPDEEFGALVGLAVVATTELDGAGTAALKQR EECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEECCCCCCHHHHHHH IAARYRRESESMARPSTIVLVEDIPRTKSGKVMRSALSASLNGARARV HHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SYGELIGAVEDLAATLEAGSVTHGSRVVVLSDNGPQTYLSVLACARLGAIAVMVDDSLP CHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCEEEEEEECCCC AATVARFSEITRPAAIIPNEGGGVGAENGERAYPKAQPDSGADEALAMIFTSGTTGEPKA HHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCE VLLPNRTFFAIPDILRAEGLRWIDWVAGETTYSPLPATHIGGLWWILNGLMHGASCITGG EEECCCCEEECCHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC EQGASLRELLVDNEVATACLVPTLLTRLVSELKLTGTDVPALRFIAYGGSRAIAADVRFI CCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEHHHEEH EAAGVRTAQVYGLSETGCTALCLPTDSESISRIEQGAVGRPYPGVQTYLSPEGGGDPTTG HHCCCEEEEEEECCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCC AESASYGTLWIKSPANMLGYWGSPERTGEVLAEGWVNTGDLVERRADGFFYIRGRSSEMI CCCCCCCEEEEECCHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHCCCCEEEEECCCCCEE ISGGVNVVPDEVDRIAEDIAGVREAACYEIPDEEFGALVGLAVVATTELDGAGTAALKQR EECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEECCCCCCHHHHHHH IAARYRRESESMARPSTIVLVEDIPRTKSGKVMRSALSASLNGARARV HHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA