| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627755
Identifier: 169627755
GI number: 169627755
Start: 655298
End: 656521
Strand: Direct
Name: 169627755
Synonym: MAB_0652
Alternate gene names: NA
Gene position: 655298-656521 (Clockwise)
Preceding gene: 169627753
Following gene: 169627756
Centisome position: 12.93
GC content: 63.48
Gene sequence:
>1224_bases GTGACGCAGCCGCCGCAGTTCGGCGGCCCCAATCCCATTGACGGACCGGCCAACCCCGCGCCGCAGTACGACGGCCCGCA ATTCGGGGGCCCGGCACCCGTGGGTGCGCCGCAGCCAGATCCCCACGGCCCGCCTCCTAACTTTGTTCAGTCTCCCCAGC AGCCCGGTTGGCCCAACCAGTTCGGCGGTCAGCCGCAGCAGTATCAGCAGTTTGGGCAACCACCGGCCGCGCCGCAGCAG AACCGCAAGGCACTGATTGTCACCGGGGTGGCTACCGGTGTGGTGCTGCTGGTGGTGGCCGTTGTGGTGGGAATCGTGTC GTTTTCCGGTGGCGGCGACGGCGAGACGCGGCCCGCCGGCGGCGCGGCGACCGCCGAGGCCGCGGTAAAGGGATACTTGG AGGCACTGTCCAAGGGCGATGCCGAAGCGGCGCTTTCCTATTCGGCGGATCAGCCGGCGTCCAAGGAATTTCTGACCGAC GACATCCTGAAGAAGCAGATCGCACAGTGGCCGGTCGGGAACATCCGGATTCTCAATTCCGAGGATATGGGTGGCGTGAT GGCACGTGTACATGTAGCCGCGAACTTCGGCGATCAAACTTCCGACGAGACAATTCTTGTCAAGAAGACGGACGGATCCT GGAAGCTCAGCACCGCGGCGGTCAAACTGTCACTTGACCAGAACGGTATCCTGGCCGGCGCCCTCCGTACGCTGTCGCTG TTTGGCAAGCCCGCCTCGAATATGTCTGTCGCATACGTATTTCCGGGTTGGTTGGATATCGGCTCGGCCAACAAGAATCT GACGGCGGTCTCGGCGCGCCCGGTTCTGCTCAACGGGATCCTGGTGCAGGGTGCCCCGGTATTTCCGGGGATCGAGATGC GGATGAGCGAAGAGGGCGCCGCGGCGGTGAAGAAGGCCGTGGCGGACAACATTGCCGAATGTGCGAAATCTACGTCGCTG GCGCCGCCGGGATGCCCTCAGGCACTGCGTAACCCGGCCTATGTTGACGGTACGGCTCGCTGGGAGCCGCCATCGGACGT GGACAAGGTGCAATACACATTTACCGCGTTCGACCTGACGGTGCGGACCACCGGCGTAACCACGTGGATGCTTACTGTGC AGTCCACCAACGGCAGCACCGTGCAAGGGAGGGCGATTGTGCCGACGATGGGGCAAATCGATATGACACAGGATCCGCTG ATAGTGAAGTGGTTCGGCCGGTGA
Upstream 100 bases:
>100_bases CTCGCATTATGCGGTGATACGCTCGGTTGGGCCGGGGTGGATCTTGCTTGCTGGAGAGGGGGCGGTTGGTGTTCGGCTAT CGCGAAGACGGGGCACGAGC
Downstream 100 bases:
>100_bases CCGCCGCGACGCAGACACAGCCCTCGCGGCAGGAACTCGACCAGGCGCGTGCGGTCATCCAGGCCGTCGCGCGGGCATTC TCCGTCAAGGTGGTCGGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 407; Mature: 406
Protein sequence:
>407_residues MTQPPQFGGPNPIDGPANPAPQYDGPQFGGPAPVGAPQPDPHGPPPNFVQSPQQPGWPNQFGGQPQQYQQFGQPPAAPQQ NRKALIVTGVATGVVLLVVAVVVGIVSFSGGGDGETRPAGGAATAEAAVKGYLEALSKGDAEAALSYSADQPASKEFLTD DILKKQIAQWPVGNIRILNSEDMGGVMARVHVAANFGDQTSDETILVKKTDGSWKLSTAAVKLSLDQNGILAGALRTLSL FGKPASNMSVAYVFPGWLDIGSANKNLTAVSARPVLLNGILVQGAPVFPGIEMRMSEEGAAAVKKAVADNIAECAKSTSL APPGCPQALRNPAYVDGTARWEPPSDVDKVQYTFTAFDLTVRTTGVTTWMLTVQSTNGSTVQGRAIVPTMGQIDMTQDPL IVKWFGR
Sequences:
>Translated_407_residues MTQPPQFGGPNPIDGPANPAPQYDGPQFGGPAPVGAPQPDPHGPPPNFVQSPQQPGWPNQFGGQPQQYQQFGQPPAAPQQ NRKALIVTGVATGVVLLVVAVVVGIVSFSGGGDGETRPAGGAATAEAAVKGYLEALSKGDAEAALSYSADQPASKEFLTD DILKKQIAQWPVGNIRILNSEDMGGVMARVHVAANFGDQTSDETILVKKTDGSWKLSTAAVKLSLDQNGILAGALRTLSL FGKPASNMSVAYVFPGWLDIGSANKNLTAVSARPVLLNGILVQGAPVFPGIEMRMSEEGAAAVKKAVADNIAECAKSTSL APPGCPQALRNPAYVDGTARWEPPSDVDKVQYTFTAFDLTVRTTGVTTWMLTVQSTNGSTVQGRAIVPTMGQIDMTQDPL IVKWFGR >Mature_406_residues TQPPQFGGPNPIDGPANPAPQYDGPQFGGPAPVGAPQPDPHGPPPNFVQSPQQPGWPNQFGGQPQQYQQFGQPPAAPQQN RKALIVTGVATGVVLLVVAVVVGIVSFSGGGDGETRPAGGAATAEAAVKGYLEALSKGDAEAALSYSADQPASKEFLTDD ILKKQIAQWPVGNIRILNSEDMGGVMARVHVAANFGDQTSDETILVKKTDGSWKLSTAAVKLSLDQNGILAGALRTLSLF GKPASNMSVAYVFPGWLDIGSANKNLTAVSARPVLLNGILVQGAPVFPGIEMRMSEEGAAAVKKAVADNIAECAKSTSLA PPGCPQALRNPAYVDGTARWEPPSDVDKVQYTFTAFDLTVRTTGVTTWMLTVQSTNGSTVQGRAIVPTMGQIDMTQDPLI VKWFGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42523; Mature: 42391
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQPPQFGGPNPIDGPANPAPQYDGPQFGGPAPVGAPQPDPHGPPPNFVQSPQQPGWPNQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCC FGGQPQQYQQFGQPPAAPQQNRKALIVTGVATGVVLLVVAVVVGIVSFSGGGDGETRPAG CCCCCHHHHHHCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC GAATAEAAVKGYLEALSKGDAEAALSYSADQPASKEFLTDDILKKQIAQWPVGNIRILNS CCHHHHHHHHHHHHHHHCCCCHHEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECC EDMGGVMARVHVAANFGDQTSDETILVKKTDGSWKLSTAAVKLSLDQNGILAGALRTLSL CCCCCEEEEEEEEECCCCCCCCCEEEEEECCCCEEEEEEEEEEEECCCCCHHHHHHHHHH FGKPASNMSVAYVFPGWLDIGSANKNLTAVSARPVLLNGILVQGAPVFPGIEMRMSEEGA HCCCCCCCEEEEEECCEEEECCCCCCEEEEECCCEEEEEEEEECCCCCCCCEEEECCCHH AAVKKAVADNIAECAKSTSLAPPGCPQALRNPAYVDGTARWEPPSDVDKVQYTFTAFDLT HHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCEECCCCCCCCCCCCCCEEEEEEEEEEE VRTTGVTTWMLTVQSTNGSTVQGRAIVPTMGQIDMTQDPLIVKWFGR EEECCEEEEEEEEECCCCCEEECCEECCCCCCCCCCCCCEEEEECCC >Mature Secondary Structure TQPPQFGGPNPIDGPANPAPQYDGPQFGGPAPVGAPQPDPHGPPPNFVQSPQQPGWPNQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCC FGGQPQQYQQFGQPPAAPQQNRKALIVTGVATGVVLLVVAVVVGIVSFSGGGDGETRPAG CCCCCHHHHHHCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC GAATAEAAVKGYLEALSKGDAEAALSYSADQPASKEFLTDDILKKQIAQWPVGNIRILNS CCHHHHHHHHHHHHHHHCCCCHHEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECC EDMGGVMARVHVAANFGDQTSDETILVKKTDGSWKLSTAAVKLSLDQNGILAGALRTLSL CCCCCEEEEEEEEECCCCCCCCCEEEEEECCCCEEEEEEEEEEEECCCCCHHHHHHHHHH FGKPASNMSVAYVFPGWLDIGSANKNLTAVSARPVLLNGILVQGAPVFPGIEMRMSEEGA HCCCCCCCEEEEEECCEEEECCCCCCEEEEECCCEEEEEEEEECCCCCCCCEEEECCCHH AAVKKAVADNIAECAKSTSLAPPGCPQALRNPAYVDGTARWEPPSDVDKVQYTFTAFDLT HHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCEECCCCCCCCCCCCCCEEEEEEEEEEE VRTTGVTTWMLTVQSTNGSTVQGRAIVPTMGQIDMTQDPLIVKWFGR EEECCEEEEEEEEECCCCCEEECCEECCCCCCCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA