Click here to switch to the map view.

The map label for this gene is ybgL [C]

Identifier: 169627677

GI number: 169627677

Start: 573468

End: 574184

Strand: Reverse

Name: ybgL [C]

Synonym: MAB_0574c

Alternate gene names: 169627677

Gene position: 574184-573468 (Counterclockwise)

Preceding gene: 169627678

Following gene: 169627670

Centisome position: 11.33

GC content: 67.5

Gene sequence:

>717_bases
ATGGCGAGCATCGACCTGAATGCAGACCTCGGTGAGGGTTTTGGGGCCTGGCGCCTCGGTGACGACGACGCCATGCTCGA
CGTGGTCACCAGCGCCAACCTCGCCTGTGGATTCCATGCGGGCGATCCGGCGACATTGCATCGCACCTGCCACGCCGCCG
CCACGCGCGATATCCGCATCGGCGCTCAGGTGGGCTATCGCGACCTCGCAGGATTCGGGCGCCGGTTCATCGATATCGCG
GCAGCAGACCTGTACGCCGATGTCGTGTACCAAATCGGTGCGTTGGACGCGCTCGCCCGCACCGCCGGGTCCCGCGTGAG
CTACGTCAAACCCCATGGCGCGCTCTACAACACGATCATTCACCACGAGGCGCAGGCGGACGCGGTGGCGCGTGCCGTGC
GGGACTTCAACGCCGATCTCCCCGTGCTGACCCTGCCACACGGCGTATTCGGGGATCGTGCGCGCACATTGGGCCTGCGT
GTGGTCACCGAGGCATTCGCCGACCGGGCCTACCTCGACGATGGCACGCTGGTGCCCCGGAGCGAATCGGGTGCTGTCCT
GCACGATCCGGACGCCGTGGCGGCGCGCATTCCCGCCCTCAGCCGCACCGCCGAATCGATATGCGTGCACGGTGATTCAC
CCGGAGCGGTCACCATCGCGCGGACGGTTCGCGCCGCACTGGCCGCCAGCGAAATCGAGGTGGCCCCGTTTGTCTAG

Upstream 100 bases:

>100_bases
GCCTATCTCGGTCTTCGTCACCATGATTGCCGTCGCGATCTATCTACTCTGCCGCCTCGTCGGACGGTATCGACACGCGT
AAGGGCGTTAGGCTTCCCGG

Downstream 100 bases:

>100_bases
CGGTGATAAGCCGGCGGCAGTGGCAGGTCGCTTTCGGCCATCACCTTCCGCAGAGTCGTCGGATAGTCGCTGATTATCCC
GTCCGCACCGGCGTCGATCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MASIDLNADLGEGFGAWRLGDDDAMLDVVTSANLACGFHAGDPATLHRTCHAAATRDIRIGAQVGYRDLAGFGRRFIDIA
AADLYADVVYQIGALDALARTAGSRVSYVKPHGALYNTIIHHEAQADAVARAVRDFNADLPVLTLPHGVFGDRARTLGLR
VVTEAFADRAYLDDGTLVPRSESGAVLHDPDAVAARIPALSRTAESICVHGDSPGAVTIARTVRAALAASEIEVAPFV

Sequences:

>Translated_238_residues
MASIDLNADLGEGFGAWRLGDDDAMLDVVTSANLACGFHAGDPATLHRTCHAAATRDIRIGAQVGYRDLAGFGRRFIDIA
AADLYADVVYQIGALDALARTAGSRVSYVKPHGALYNTIIHHEAQADAVARAVRDFNADLPVLTLPHGVFGDRARTLGLR
VVTEAFADRAYLDDGTLVPRSESGAVLHDPDAVAARIPALSRTAESICVHGDSPGAVTIARTVRAALAASEIEVAPFV
>Mature_237_residues
ASIDLNADLGEGFGAWRLGDDDAMLDVVTSANLACGFHAGDPATLHRTCHAAATRDIRIGAQVGYRDLAGFGRRFIDIAA
ADLYADVVYQIGALDALARTAGSRVSYVKPHGALYNTIIHHEAQADAVARAVRDFNADLPVLTLPHGVFGDRARTLGLRV
VTEAFADRAYLDDGTLVPRSESGAVLHDPDAVAARIPALSRTAESICVHGDSPGAVTIARTVRAALAASEIEVAPFV

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family [H]

Homologues:

Organism=Escherichia coli, GI1786931, Length=247, Percent_Identity=37.6518218623482, Blast_Score=154, Evalue=3e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR005501 [H]

Pfam domain/function: PF03746 LamB_YcsF [H]

EC number: NA

Molecular weight: Translated: 25025; Mature: 24894

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASIDLNADLGEGFGAWRLGDDDAMLDVVTSANLACGFHAGDPATLHRTCHAAATRDIRI
CCEECCCCCCCCCCCCEEECCCCHHEEHHHCCCEEEEECCCCCHHHHHHHHHHCCCCEEE
GAQVGYRDLAGFGRRFIDIAAADLYADVVYQIGALDALARTAGSRVSYVKPHGALYNTII
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHH
HHEAQADAVARAVRDFNADLPVLTLPHGVFGDRARTLGLRVVTEAFADRAYLDDGTLVPR
HCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCC
SESGAVLHDPDAVAARIPALSRTAESICVHGDSPGAVTIARTVRAALAASEIEVAPFV
CCCCCEEECCCHHHHHCCHHHHCCHHEEEECCCCCEEHHHHHHHHHHHHCCCEECCCC
>Mature Secondary Structure 
ASIDLNADLGEGFGAWRLGDDDAMLDVVTSANLACGFHAGDPATLHRTCHAAATRDIRI
CEECCCCCCCCCCCCEEECCCCHHEEHHHCCCEEEEECCCCCHHHHHHHHHHCCCCEEE
GAQVGYRDLAGFGRRFIDIAAADLYADVVYQIGALDALARTAGSRVSYVKPHGALYNTII
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHH
HHEAQADAVARAVRDFNADLPVLTLPHGVFGDRARTLGLRVVTEAFADRAYLDDGTLVPR
HCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCC
SESGAVLHDPDAVAARIPALSRTAESICVHGDSPGAVTIARTVRAALAASEIEVAPFV
CCCCCEEECCCHHHHHCCHHHHCCHHEEEECCCCCEEHHHHHHHHHHHHCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA