Click here to switch to the map view.

The map label for this gene is lpqE [H]

Identifier: 169627670

GI number: 169627670

Start: 567309

End: 567992

Strand: Reverse

Name: lpqE [H]

Synonym: MAB_0567c

Alternate gene names: 169627670

Gene position: 567992-567309 (Counterclockwise)

Preceding gene: 169627677

Following gene: 169627669

Centisome position: 11.21

GC content: 66.96

Gene sequence:

>684_bases
GTGTTTCGCACCCGGTCCCGGCGCAGCACCACTCGCGTTACGACACTTCTCGGCGCCGCCGTGTTGGCGACTGCTCTGAC
CGGCTGCGGTGCCGGCCAGATCTCGCAGACCGCGAACCAGTCGTCGGCGATCAACGGTGGCAGTGCCAACCTCGGCAAGC
TGGCACTGCGCAACATTCACCTCGTCGGAAATTCCGACCCGGTCAAGCAGCGTGCCGGACAGAAGGCAGAGCTGGTTCTG
GTCATCGCGAATGAATCCGCGGATATCAGCGACAAGCTCACCTCCATCACCTCGCCCGACGAGATCGGCAAGGTCACGCT
GAGCGGTGACAGCGACATCCCCGCCACCGGGCGTTTGTTCGTCGGCTCGGCCGAGGGCCAGGAGCCTCCCGCCGAGGCGA
AGGCCCCTGAGACCGCCGCTCCGGAAGCCGGCAGCACGGAGATCACCACGGCCGTGACCCCGGCGCCAGAAGCCAAGCCG
CAGGCCTCTTCTGATCCGGCGATCAAGCACGGCAAGGCACAGCTGACACTGACCAAGGATCTGGCCGACGGACTGACCTA
CCGGTTCACGTTCACGTTCGAGAAGGCCGGAGAGGTCACCGTCGCGGTGCCTATCGACGCGGGGCCCAACGCCCCCCGCC
AGCACACCATCGACGGCGGCGGCCACGAGGGTGGCGAGCACTAG

Upstream 100 bases:

>100_bases
GTTTTAGTCGAGGCGAGGGACCTACTACTGTCTATAGGACATATCGGCCGCAGGTGGTTTCCGGACCCGTCCGGAGCCGC
TTCGAATCAGGGAGATGCCT

Downstream 100 bases:

>100_bases
CACAGTCGTATCGCGAGGGCCTGGAACGGCGATCTGCCGTCCCGGGCCCTCGCGTTTTTCGTGCTAGCTTGCGCCCATGA
AACGGCTCTTCACCTGCGTG

Product: putative lipoprotein lpqE precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MFRTRSRRSTTRVTTLLGAAVLATALTGCGAGQISQTANQSSAINGGSANLGKLALRNIHLVGNSDPVKQRAGQKAELVL
VIANESADISDKLTSITSPDEIGKVTLSGDSDIPATGRLFVGSAEGQEPPAEAKAPETAAPEAGSTEITTAVTPAPEAKP
QASSDPAIKHGKAQLTLTKDLADGLTYRFTFTFEKAGEVTVAVPIDAGPNAPRQHTIDGGGHEGGEH

Sequences:

>Translated_227_residues
MFRTRSRRSTTRVTTLLGAAVLATALTGCGAGQISQTANQSSAINGGSANLGKLALRNIHLVGNSDPVKQRAGQKAELVL
VIANESADISDKLTSITSPDEIGKVTLSGDSDIPATGRLFVGSAEGQEPPAEAKAPETAAPEAGSTEITTAVTPAPEAKP
QASSDPAIKHGKAQLTLTKDLADGLTYRFTFTFEKAGEVTVAVPIDAGPNAPRQHTIDGGGHEGGEH
>Mature_227_residues
MFRTRSRRSTTRVTTLLGAAVLATALTGCGAGQISQTANQSSAINGGSANLGKLALRNIHLVGNSDPVKQRAGQKAELVL
VIANESADISDKLTSITSPDEIGKVTLSGDSDIPATGRLFVGSAEGQEPPAEAKAPETAAPEAGSTEITTAVTPAPEAKP
QASSDPAIKHGKAQLTLTKDLADGLTYRFTFTFEKAGEVTVAVPIDAGPNAPRQHTIDGGGHEGGEH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23216; Mature: 23216

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRTRSRRSTTRVTTLLGAAVLATALTGCGAGQISQTANQSSAINGGSANLGKLALRNIH
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCHHEEEEEEEE
LVGNSDPVKQRAGQKAELVLVIANESADISDKLTSITSPDEIGKVTLSGDSDIPATGRLF
EECCCCHHHHHCCCCEEEEEEEECCCCCHHHHHHCCCCCHHHCEEEECCCCCCCCCCEEE
VGSAEGQEPPAEAKAPETAAPEAGSTEITTAVTPAPEAKPQASSDPAIKHGKAQLTLTKD
EECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEHH
LADGLTYRFTFTFEKAGEVTVAVPIDAGPNAPRQHTIDGGGHEGGEH
HHCCEEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFRTRSRRSTTRVTTLLGAAVLATALTGCGAGQISQTANQSSAINGGSANLGKLALRNIH
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCHHEEEEEEEE
LVGNSDPVKQRAGQKAELVLVIANESADISDKLTSITSPDEIGKVTLSGDSDIPATGRLF
EECCCCHHHHHCCCCEEEEEEEECCCCCHHHHHHCCCCCHHHCEEEECCCCCCCCCCEEE
VGSAEGQEPPAEAKAPETAAPEAGSTEITTAVTPAPEAKPQASSDPAIKHGKAQLTLTKD
EECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEHH
LADGLTYRFTFTFEKAGEVTVAVPIDAGPNAPRQHTIDGGGHEGGEH
HHCCEEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]